RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 MUC7Q8TAX7 377 aa15.78■□□□□ 0.12
NDEL1-201ENST00000334527 TMEM256-PLSCR3K7ERE1 68 aa15.77■□□□□ 0.11
NDEL1-201ENST00000334527 JMJD7-PLA2G4BH0Y9G9 81 aa15.75■□□□□ 0.11
NDEL1-201ENST00000334527 CCKP06307 115 aa15.74■□□□□ 0.11
NDEL1-201ENST00000334527 RPL18AQ02543 176 aaKnown RBP15.73■□□□□ 0.11
NDEL1-201ENST00000334527 LINC00575Q6W349 94 aa15.73■□□□□ 0.11
NDEL1-201ENST00000334527 RETNQ9HD89 108 aa15.72■□□□□ 0.11
NDEL1-201ENST00000334527 IGKV3D-7A0A0C4DH55 119 aa15.72■□□□□ 0.11
NDEL1-201ENST00000334527 Q6JHZ5 121 aa15.71■□□□□ 0.11
NDEL1-201ENST00000334527 GVQW2A0A096LPI5 108 aaPredicted RBP15.71■□□□□ 0.11
NDEL1-201ENST00000334527 C6orf48Q9UBA6 75 aa15.71■□□□□ 0.11
NDEL1-201ENST00000334527 IGLV6-57P01721 117 aa15.7■□□□□ 0.1
NDEL1-201ENST00000334527 OXLD1Q5BKU9 147 aa15.7■□□□□ 0.1
NDEL1-201ENST00000334527 WFDC10BQ8IUB3 73 aa15.7■□□□□ 0.1
NDEL1-201ENST00000334527 KPRPQ5T749 579 aaPredicted RBP15.69■□□□□ 0.1
NDEL1-201ENST00000334527 hADV29S1A0JD25 119 aa15.68■□□□□ 0.1
NDEL1-201ENST00000334527 XAGE1AQ9HD64 81 aa15.67■□□□□ 0.1
NDEL1-201ENST00000334527 KRTAP10-11P60412 298 aa15.65■□□□□ 0.1
NDEL1-201ENST00000334527 HIST1H4AP62805 103 aaKnown RBP15.65■□□□□ 0.1
NDEL1-201ENST00000334527 H3BNG1 76 aa15.65■□□□□ 0.1
NDEL1-201ENST00000334527 HIGD2BQ4VC39 106 aa15.64■□□□□ 0.09
NDEL1-201ENST00000334527 Q6ZTC4 211 aa15.64■□□□□ 0.09
NDEL1-201ENST00000334527 C3orf56Q8N813 242 aa15.63■□□□□ 0.09
NDEL1-201ENST00000334527 ZNF561-AS1K7EIQ3 104 aa15.63■□□□□ 0.09
NDEL1-201ENST00000334527 TRBV10-3A0A0K0K1G6 114 aa15.62■□□□□ 0.09
NDEL1-201ENST00000334527 C3orf22Q8N5N4 141 aa15.62■□□□□ 0.09
NDEL1-201ENST00000334527 CAMK2N2Q96S95 79 aa15.61■□□□□ 0.09
NDEL1-201ENST00000334527 TRAV23DV6A0A075B6W5 121 aa15.6■□□□□ 0.09
NDEL1-201ENST00000334527 UQCRQO14949 82 aa15.6■□□□□ 0.09
NDEL1-201ENST00000334527 A0A087WVE0 104 aa15.6■□□□□ 0.09
NDEL1-201ENST00000334527 ATOX1O00244 68 aa15.6■□□□□ 0.09
NDEL1-201ENST00000334527 KRTAP26-1Q6PEX3 210 aa15.6■□□□□ 0.09
NDEL1-201ENST00000334527 C9orf153Q5TBE3 101 aa15.59■□□□□ 0.09
NDEL1-201ENST00000334527 Q6ZQY7 126 aa15.57■□□□□ 0.08
NDEL1-201ENST00000334527 DIRC1Q969H9 104 aa15.57■□□□□ 0.08
NDEL1-201ENST00000334527 LAMTOR3Q9UHA4 124 aa15.57■□□□□ 0.08
NDEL1-201ENST00000334527 RBM3P98179 157 aaKnown RBP15.57■□□□□ 0.08
NDEL1-201ENST00000334527 ESRGQ1W209 222 aa15.56■□□□□ 0.08
NDEL1-201ENST00000334527 COX7CP15954 63 aa15.55■□□□□ 0.08
NDEL1-201ENST00000334527 Q6ZRU5 148 aa15.55■□□□□ 0.08
NDEL1-201ENST00000334527 C15orf56Q8N910 161 aa15.55■□□□□ 0.08
NDEL1-201ENST00000334527 EGFEM1PQ0D2K5 195 aa15.54■□□□□ 0.08
NDEL1-201ENST00000334527 C2orf48Q96LS8 159 aa15.54■□□□□ 0.08
NDEL1-201ENST00000334527 ZNF73O43830 326 aaPredicted RBP15.54■□□□□ 0.08
NDEL1-201ENST00000334527 Q6ZQT0 140 aa15.54■□□□□ 0.08
NDEL1-201ENST00000334527 PKD1L1Q8TDX9 2849 aa15.53■□□□□ 0.08
NDEL1-201ENST00000334527 VPREB1P12018 145 aa15.53■□□□□ 0.08
NDEL1-201ENST00000334527 ATP5EP2Q5VTU8 51 aa15.51■□□□□ 0.07
NDEL1-201ENST00000334527 LOC110117498A0A087WWA1 95 aa15.51■□□□□ 0.07
NDEL1-201ENST00000334527 UBL5Q9BZL1 73 aa15.51■□□□□ 0.07
NDEL1-201ENST00000334527 COX7BP24311 80 aa15.5■□□□□ 0.07
NDEL1-201ENST00000334527 C1orf43Q9BWL3 253 aa15.5■□□□□ 0.07
NDEL1-201ENST00000334527 USP17L23D6RBM5 183 aa15.48■□□□□ 0.07
NDEL1-201ENST00000334527 NDUFC2-KCTD14E9PQ53 114 aa15.48■□□□□ 0.07
NDEL1-201ENST00000334527 DEFB131BA0A096LNP1 70 aa15.48■□□□□ 0.07
NDEL1-201ENST00000334527 H3BQ85 93 aa15.48■□□□□ 0.07
NDEL1-201ENST00000334527 ELOF1P60002 83 aaKnown RBP15.48■□□□□ 0.07
NDEL1-201ENST00000334527 DSCR8Q96T75 97 aa15.47■□□□□ 0.07
NDEL1-201ENST00000334527 M0R378 163 aa15.47■□□□□ 0.07
NDEL1-201ENST00000334527 IGKV2D-24A0A075B6R9 120 aa15.46■□□□□ 0.07
NDEL1-201ENST00000334527 LINC01556Q5JQF7 62 aa15.46■□□□□ 0.07
NDEL1-201ENST00000334527 ANK2Q01484 3957 aa15.46■□□□□ 0.07
NDEL1-201ENST00000334527 M0R2N4 97 aa15.45■□□□□ 0.06
NDEL1-201ENST00000334527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.45■□□□□ 0.06
NDEL1-201ENST00000334527 C11orf45Q8TAV5 145 aa15.45■□□□□ 0.06
NDEL1-201ENST00000334527 TENM3Q9P273 2699 aa15.45■□□□□ 0.06
NDEL1-201ENST00000334527 KRTAP24-1Q3LI83 254 aa15.44■□□□□ 0.06
NDEL1-201ENST00000334527 TRBV7-6A0A0J9YX20 115 aa15.44■□□□□ 0.06
NDEL1-201ENST00000334527 FAM19A1Q7Z5A9 133 aa15.43■□□□□ 0.06
NDEL1-201ENST00000334527 SMIM20Q8N5G0 67 aa15.43■□□□□ 0.06
NDEL1-201ENST00000334527 CRYGAP11844 174 aa15.42■□□□□ 0.06
NDEL1-201ENST00000334527 Q6ZRP5 223 aa15.42■□□□□ 0.06
NDEL1-201ENST00000334527 SERP2Q8N6R1 65 aa15.42■□□□□ 0.06
NDEL1-201ENST00000334527 PDE6GP18545 87 aa15.4■□□□□ 0.06
NDEL1-201ENST00000334527 F8P00451 2351 aa15.39■□□□□ 0.05
NDEL1-201ENST00000334527 GHRHP01286 108 aa15.38■□□□□ 0.05
NDEL1-201ENST00000334527 SYCNQ0VAF6 134 aa15.38■□□□□ 0.05
NDEL1-201ENST00000334527 CMYA5Q8N3K9 4069 aa15.38■□□□□ 0.05
NDEL1-201ENST00000334527 UPK3BQ9BT76 320 aa15.38■□□□□ 0.05
NDEL1-201ENST00000334527 LINC00528Q8N1L1 170 aa15.36■□□□□ 0.05
NDEL1-201ENST00000334527 F8WDY8 70 aa15.36■□□□□ 0.05
NDEL1-201ENST00000334527 Q6ZVQ6 151 aa15.35■□□□□ 0.05
NDEL1-201ENST00000334527 FBN1P35555 2871 aaKnown RBP15.35■□□□□ 0.05
NDEL1-201ENST00000334527 TRBV7-4A0A0J9YYF1 115 aa15.34■□□□□ 0.05
NDEL1-201ENST00000334527 DNAH10OSP0CZ25 163 aa15.33■□□□□ 0.04
NDEL1-201ENST00000334527 LINC01547P58512 204 aaPredicted RBP15.33■□□□□ 0.04
NDEL1-201ENST00000334527 STAB1Q9NY15 2570 aa15.33■□□□□ 0.04
NDEL1-201ENST00000334527 HAMPP81172 84 aa15.33■□□□□ 0.04
NDEL1-201ENST00000334527 CYSTM1Q9H1C7 97 aa15.33■□□□□ 0.04
NDEL1-201ENST00000334527 NKAPP1Q8N9T2 125 aa15.29■□□□□ 0.04
NDEL1-201ENST00000334527 SERTAD4-AS1Q5TG53 156 aa15.28■□□□□ 0.04
NDEL1-201ENST00000334527 DNAH3Q8TD57 4116 aa15.26■□□□□ 0.03
NDEL1-201ENST00000334527 C7orf33Q8WU49 177 aa15.25■□□□□ 0.03
NDEL1-201ENST00000334527 KCNQ1DNQ9H478 68 aa15.25■□□□□ 0.03
NDEL1-201ENST00000334527 TRAV10A0A0B4J240 114 aa15.25■□□□□ 0.03
NDEL1-201ENST00000334527 LINC00588Q9Y4M8 146 aa15.25■□□□□ 0.03
NDEL1-201ENST00000334527 FLNBO75369 2602 aaKnown RBP15.24■□□□□ 0.03
NDEL1-201ENST00000334527 CXCL6P80162 114 aa15.24■□□□□ 0.03
NDEL1-201ENST00000334527 PRB2P02812 416 aaPredicted RBP15.21■□□□□ 0.03
NDEL1-201ENST00000334527 TLX1NBP0CAT3 122 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms