RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 X6R8D5 127 aa8.31□□□□□ -1.08
HDAC6-201ENST00000334136 MPLKIPQ8TAP9 179 aa8.3□□□□□ -1.08
HDAC6-201ENST00000334136 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
HDAC6-201ENST00000334136 FUSP35637 526 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC6-201ENST00000334136 Q6ZQY7 126 aa8.3□□□□□ -1.08
HDAC6-201ENST00000334136 SVEP1Q4LDE5 3571 aa8.29□□□□□ -1.08
HDAC6-201ENST00000334136 BSNQ9UPA5 3926 aa8.29□□□□□ -1.08
HDAC6-201ENST00000334136 C11orf72Q8NBR9 251 aa8.29□□□□□ -1.08
HDAC6-201ENST00000334136 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
HDAC6-201ENST00000334136 UBE2BP63146 152 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 HRCT1Q6UXD1 115 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 LINC00959A0A1B0GUT2 108 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 NUPR2A6NF83 97 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
HDAC6-201ENST00000334136 FHL2Q14192 279 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 FAM19A5Q7Z5A7 132 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-201ENST00000334136 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 A8MTW9 85 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 COX7BP24311 80 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 RPL28P46779 137 aaKnown RBP8.27□□□□□ -1.09
HDAC6-201ENST00000334136 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-201ENST00000334136 LINC00846Q9NV44 126 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
HDAC6-201ENST00000334136 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
HDAC6-201ENST00000334136 BPY2O14599 106 aa8.25□□□□□ -1.09
HDAC6-201ENST00000334136 WIPF1O43516 503 aa8.25□□□□□ -1.09
HDAC6-201ENST00000334136 Q6JHZ5 121 aa8.25□□□□□ -1.09
HDAC6-201ENST00000334136 Q8NAQ8 132 aa8.25□□□□□ -1.09
HDAC6-201ENST00000334136 ATP5EP2Q5VTU8 51 aa8.25□□□□□ -1.09
HDAC6-201ENST00000334136 PDE6GP18545 87 aa8.24□□□□□ -1.09
HDAC6-201ENST00000334136 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
HDAC6-201ENST00000334136 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
HDAC6-201ENST00000334136 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 C3orf84H3BNL1 204 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 LY6G6CO95867 125 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-201ENST00000334136 LELP1Q5T871 98 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 NDUFC2O95298 119 aa8.23□□□□□ -1.09
HDAC6-201ENST00000334136 CCKP06307 115 aa8.22□□□□□ -1.09
HDAC6-201ENST00000334136 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
HDAC6-201ENST00000334136 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-201ENST00000334136 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
HDAC6-201ENST00000334136 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.1
HDAC6-201ENST00000334136 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
HDAC6-201ENST00000334136 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
HDAC6-201ENST00000334136 A0A087WZ39 114 aa8.19□□□□□ -1.1
HDAC6-201ENST00000334136 Q8N814 137 aa8.19□□□□□ -1.1
HDAC6-201ENST00000334136 NBEAL2Q6ZNJ1 2754 aa8.19□□□□□ -1.1
HDAC6-201ENST00000334136 M0R2N4 97 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 PRR4Q16378 134 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 CSDC2Q9Y534 153 aaKnown RBP8.18□□□□□ -1.1
HDAC6-201ENST00000334136 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
HDAC6-201ENST00000334136 Q8IZM0 81 aa8.17□□□□□ -1.1
HDAC6-201ENST00000334136 NBPF19A0A087WUL8 3843 aa8.17□□□□□ -1.1
HDAC6-201ENST00000334136 CELSR1Q9NYQ6 3014 aa8.17□□□□□ -1.1
HDAC6-201ENST00000334136 LITAFQ99732 161 aa8.17□□□□□ -1.1
HDAC6-201ENST00000334136 H3BQ85 93 aa8.17□□□□□ -1.1
HDAC6-201ENST00000334136 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
HDAC6-201ENST00000334136 MP68P56378 58 aa8.15□□□□□ -1.1
HDAC6-201ENST00000334136 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.11
HDAC6-201ENST00000334136 Q8N3U1 123 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 MUC7Q8TAX7 377 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 A0A096LNI7 61 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 LRCOL1A6NCL2 159 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 NDUFS5O43920 106 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
HDAC6-201ENST00000334136 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-201ENST00000334136 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
HDAC6-201ENST00000334136 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
HDAC6-201ENST00000334136 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
HDAC6-201ENST00000334136 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
HDAC6-201ENST00000334136 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
HDAC6-201ENST00000334136 TRAV7A0A075B6U4 112 aa8.12□□□□□ -1.11
HDAC6-201ENST00000334136 IGHV3OR16-9A0A0B4J2B5 98 aa8.12□□□□□ -1.11
HDAC6-201ENST00000334136 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
HDAC6-201ENST00000334136 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
HDAC6-201ENST00000334136 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
HDAC6-201ENST00000334136 H3BNG1 76 aa8.11□□□□□ -1.11
HDAC6-201ENST00000334136 PLAC8L1A1L4L8 177 aa8.1□□□□□ -1.11
HDAC6-201ENST00000334136 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
HDAC6-201ENST00000334136 ESRGQ1W209 222 aa8.1□□□□□ -1.11
HDAC6-201ENST00000334136 CRYGAP11844 174 aa8.09□□□□□ -1.11
HDAC6-201ENST00000334136 COX17Q14061 63 aa8.09□□□□□ -1.11
HDAC6-201ENST00000334136 SMIM26A0A096LP01 95 aa8.09□□□□□ -1.11
HDAC6-201ENST00000334136 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
HDAC6-201ENST00000334136 Q6ZVQ6 151 aa8.09□□□□□ -1.11
HDAC6-201ENST00000334136 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
HDAC6-201ENST00000334136 Q8N9L7 120 aa8.08□□□□□ -1.12
HDAC6-201ENST00000334136 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
HDAC6-201ENST00000334136 NDUFC1O43677 76 aa8.08□□□□□ -1.12
HDAC6-201ENST00000334136 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms