RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GNG2P59768 71 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 PPP3R1P63098 170 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 TMEM91Q6ZNR0 172 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 LYRM2Q9NU23 88 aaPredicted RBP0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 TRAV27A0A087WT01 109 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 LOC285095A0A1B0GVY8 99 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 C5orf58C9J3I9 102 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 LINC00694P0DN24 101 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 BCL2P10415 239 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 FABP2P12104 132 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 DEFA4P12838 97 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 SEC11AP67812 179 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 HIST1H1AQ02539 215 aaPredicted RBP0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 SMCO1Q147U7 214 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 C22orf39Q6P5X5 142 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 Q8N6K4 173 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 TERB2Q8NHR7 220 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 C18orf32Q8TCD1 76 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 PDCD10Q9BUL8 212 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 DSCAMO60469 2012 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 ALPK2Q86TB3 2170 aa0.34□□□□□ -2.35
CCDC144A-201ENST00000328495 C2orf70A6NJV1 201 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 ZNF815PA8K554 130 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 CCL25O15444 150 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 NUPR1O60356 82 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 NMBP08949 121 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 TPT1P13693 172 aaKnown RBP0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 NFYBP25208 207 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00575Q6W349 94 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 Q6ZUT4 128 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 C9orf163Q8N9P6 203 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 FDCSPQ8NFU4 85 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 WFDC6Q9BQY6 131 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 PSMG3Q9BT73 122 aaPredicted RBP0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 SSR3Q9UNL2 185 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 DNAJC15Q9Y5T4 150 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 SERP1Q9Y6X1 66 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 FREM1Q5H8C1 2179 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 TRBV6-4A0A1B0GX49 114 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 H7C1C5 153 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 PDCD5O14737 125 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 MFSD11O43934 449 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 IGLV1-51P01701 117 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 RBP4P02753 201 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 MT1AP04731 61 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 COX7CP15954 63 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 SPRR1BP22528 89 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 HEPN1Q6WQI6 88 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 GOLT1AQ6ZVE7 132 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 S100A7AQ86SG5 101 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 MGST2Q99735 147 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00470Q9BZP3 86 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 NMES1Q9C002 83 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 ST20Q9HBF5 79 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 V9GYS6 101 aa0.34□□□□□ -2.36
CCDC144A-201ENST00000328495 IGHV1-24A0A0C4DH33 117 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 TRDV1A0A1B0GX56 115 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 BUB1B-PAK6H3BSN5 160 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SAA2P0DJI9 122 aaPredicted RBP0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 MPC1LP0DKB6 136 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 RNASE3P12724 160 aaKnown RBP0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 UBE2D1P51668 147 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SPATA45Q537H7 98 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 TMEM170BQ5T4T1 132 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 S100A13Q99584 98 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 IGLC7A0M8Q6 106 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 E7EUB6 86 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 M0R378 163 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 HIST1H2BKO60814 126 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 CNIH1O95406 144 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 HIST1H2BJP06899 126 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 COX6CP09669 75 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 RPS25P62851 125 aaKnown RBP0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SPINK9Q5DT21 86 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SPATA8Q6RVD6 105 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 Q6ZRX8 168 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SMIM15Q7Z3B0 74 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 SPRR4Q96PI1 79 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 VPS25Q9BRG1 176 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 NPCDR1Q9BY65 106 aa0.33□□□□□ -2.36
CCDC144A-201ENST00000328495 ARHGAP32A7KAX9 2087 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 GVQW2A0A096LPI5 108 aaPredicted RBP0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 ZNF727A8MUV8 499 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 UMAD1C9J7I0 102 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 JMJD7-PLA2G4BH0Y9G9 81 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 MT-ND4LP03901 98 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 IGLC1P0CG04 106 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 PDE6GP18545 87 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 C1orf134Q5TEV5 83 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 C1orf140Q5VVS0 124 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 OR2T2Q6IF00 324 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 ATP11AUNQ6ZP68 121 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 EXOC3-AS1Q8N2X6 119 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 C14orf144Q96I85 54 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 C10orf95Q9H7T3 257 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 V9GYH0 126 aa0.32□□□□□ -2.36
CCDC144A-201ENST00000328495 DEFB131BA0A096LNP1 70 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms