RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 C9orf116Q5BN46 136 aaPredicted RBP3.3□□□□□ -1.88
LRIT3-201ENST00000327908 C10orf25Q5T742 122 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
LRIT3-201ENST00000327908 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 H0Y9J4 135 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 RPL28P46779 137 aaKnown RBP3.3□□□□□ -1.88
LRIT3-201ENST00000327908 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 IGKV2-24A0A0C4DH68 120 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 A0A1B0GX51 115 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 COX6CP09669 75 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 VPREB1P12018 145 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 KRTAP10-2P60368 255 aa3.3□□□□□ -1.88
LRIT3-201ENST00000327908 DNAH7Q8WXX0 4024 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 SLPIP03973 132 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 C12orf57Q99622 126 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 A0A087WYN8 130 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 BVES-AS1Q5T3Y7 98 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 CEND1Q8N111 149 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 LINC00337Q8N6G1 96 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 PCP4L1A6NKN8 68 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 SLC25A20O43772 301 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 DDTP30046 118 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 KRTAP10-1P60331 282 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 RPL37AP61513 92 aaKnown RBP3.29□□□□□ -1.88
LRIT3-201ENST00000327908 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 DIRC1Q969H9 104 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 C22orf24Q9Y442 160 aa3.29□□□□□ -1.88
LRIT3-201ENST00000327908 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 H0YGX0 51 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 OCIAD2Q56VL3 154 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 LITAFQ99732 161 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 VPS13DQ5THJ4 4388 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 BCE1O60756 84 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 REG3GQ6UW15 175 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
LRIT3-201ENST00000327908 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
LRIT3-201ENST00000327908 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
LRIT3-201ENST00000327908 SCXQ7RTU7 201 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 MUSTN1Q8IVN3 82 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 OR13C6PQ8NH95 151 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 C14orf144Q96I85 54 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 IGLV6-57P01721 117 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 UBE2AP49459 152 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 SPINK6Q6UWN8 80 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 XAGE1AQ9HD64 81 aa3.27□□□□□ -1.89
LRIT3-201ENST00000327908 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 LINC00528Q8N1L1 170 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 RPL37AP8A6NKH3 93 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 CIRBP-AS1Q8TBR5 109 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 PRO1854Q9UHT4 67 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.26□□□□□ -1.89
LRIT3-201ENST00000327908 COX7BP24311 80 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 LINC00167Q96N53 147 aa3.26□□□□□ -1.89
LRIT3-201ENST00000327908 Q8N1X5 172 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 SPRR1AP35321 89 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 PRR3P79522 188 aaKnown RBP3.25□□□□□ -1.89
LRIT3-201ENST00000327908 Q1RN00 199 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 C2orf91Q6ZV80 131 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 A0A0U1RRA0 63 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
LRIT3-201ENST00000327908 FAM229BQ4G0N7 80 aa3.25□□□□□ -1.89
LRIT3-201ENST00000327908 NCR3O14931 201 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
LRIT3-201ENST00000327908 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
LRIT3-201ENST00000327908 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 ZNF861PO60384 105 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 IGLV7-43P04211 117 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 CHTF8P0CG12 524 aa3.24□□□□□ -1.89
LRIT3-201ENST00000327908 TRBV10-3A0A0K0K1G6 114 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 B5MCH6 92 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 OXTP01178 125 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 CFC1BP0CG36 223 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 CFC1P0CG37 223 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 C1orf137Q5JT78 98 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 SERTAD4-AS1Q5TG53 156 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 FAM19A1Q7Z5A9 133 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.23□□□□□ -1.89
LRIT3-201ENST00000327908 SOSTDC1Q6X4U4 206 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 PHF5AQ7RTV0 110 aaKnown RBP3.23□□□□□ -1.89
LRIT3-201ENST00000327908 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
LRIT3-201ENST00000327908 PSMB2P49721 201 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 XGP55808 180 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 ELOF1P60002 83 aaKnown RBP3.22□□□□□ -1.89
LRIT3-201ENST00000327908 COL5A1-AS1Q5SY13 56 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 Q6ZRX8 168 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 TTTY13Q9BZ97 58 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 PRO1933Q9H354 126 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 DNAL4O96015 105 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 DAND5Q8N907 189 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 PSORS1C2Q9UIG4 136 aa3.22□□□□□ -1.89
LRIT3-201ENST00000327908 FAM30AQ9NZY2 134 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 F8WEM9 126 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms