RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 OCIAD2Q56VL3 154 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 ARL17AQ8IVW1 177 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
VIPAS39-201ENST00000327028 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
VIPAS39-201ENST00000327028 FXYD2P54710 66 aa6.59□□□□□ -1.35
VIPAS39-201ENST00000327028 GAGE2EQ4V326 116 aa6.59□□□□□ -1.36
VIPAS39-201ENST00000327028 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.36
VIPAS39-201ENST00000327028 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
VIPAS39-201ENST00000327028 A4D1N5 150 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 SDIM1Q6ZPB5 146 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 A0A096LNI7 61 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 VAMP3Q15836 100 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 PKD1P98161 4303 aa6.57□□□□□ -1.36
VIPAS39-201ENST00000327028 NDUFC2O95298 119 aa6.56□□□□□ -1.36
VIPAS39-201ENST00000327028 K7ERU9 68 aa6.55□□□□□ -1.36
VIPAS39-201ENST00000327028 Q8NDZ9 215 aa6.55□□□□□ -1.36
VIPAS39-201ENST00000327028 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
VIPAS39-201ENST00000327028 IGKV2-24A0A0C4DH68 120 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 A0A1B0GWB2 263 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 LINC00474Q9P2X8 69 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 A6NDN8 102 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 VPREB1P12018 145 aa6.54□□□□□ -1.36
VIPAS39-201ENST00000327028 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
VIPAS39-201ENST00000327028 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
VIPAS39-201ENST00000327028 CFC1P0CG37 223 aa6.53□□□□□ -1.36
VIPAS39-201ENST00000327028 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
VIPAS39-201ENST00000327028 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
VIPAS39-201ENST00000327028 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
VIPAS39-201ENST00000327028 IGLV5-37A0A075B6J1 123 aa6.52□□□□□ -1.37
VIPAS39-201ENST00000327028 K7ERJ3 54 aa6.52□□□□□ -1.37
VIPAS39-201ENST00000327028 SERTAD4-AS1Q5TG53 156 aa6.52□□□□□ -1.37
VIPAS39-201ENST00000327028 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
VIPAS39-201ENST00000327028 TRBV10-2A0A0K0K1G8 114 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 NCR3O14931 201 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 PANO1I0J062 215 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
VIPAS39-201ENST00000327028 RYR3Q15413 4870 aa6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 FAM19A5Q7Z5A7 132 aaPredicted RBP6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 M0R378 163 aa6.5□□□□□ -1.37
VIPAS39-201ENST00000327028 A0A1B0GV72 72 aa6.49□□□□□ -1.37
VIPAS39-201ENST00000327028 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
VIPAS39-201ENST00000327028 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
VIPAS39-201ENST00000327028 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
VIPAS39-201ENST00000327028 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
VIPAS39-201ENST00000327028 DNAH8Q96JB1 4490 aa6.48□□□□□ -1.37
VIPAS39-201ENST00000327028 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
VIPAS39-201ENST00000327028 EPM2AB3EWF7 344 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 M0QXV9 152 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 Q6ZSA8 131 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 S100A7L2Q5SY68 101 aa6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
VIPAS39-201ENST00000327028 TRBV10-3A0A0K0K1G6 114 aa6.46□□□□□ -1.37
VIPAS39-201ENST00000327028 DPH3Q96FX2 82 aa6.46□□□□□ -1.37
VIPAS39-201ENST00000327028 TMEM126AQ9H061 195 aa6.46□□□□□ -1.37
VIPAS39-201ENST00000327028 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.37
VIPAS39-201ENST00000327028 A0A087WYN8 130 aa6.46□□□□□ -1.38
VIPAS39-201ENST00000327028 TAX1BP3O14907 124 aa6.46□□□□□ -1.38
VIPAS39-201ENST00000327028 TSPAN13O95857 204 aa6.46□□□□□ -1.38
VIPAS39-201ENST00000327028 H7C2G1 150 aa6.46□□□□□ -1.38
VIPAS39-201ENST00000327028 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
VIPAS39-201ENST00000327028 GAGE10A6NGK3 116 aa6.45□□□□□ -1.38
VIPAS39-201ENST00000327028 FAM30AQ9NZY2 134 aa6.45□□□□□ -1.38
VIPAS39-201ENST00000327028 Q1RN00 199 aa6.45□□□□□ -1.38
VIPAS39-201ENST00000327028 LINC00167Q96N53 147 aa6.45□□□□□ -1.38
VIPAS39-201ENST00000327028 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
VIPAS39-201ENST00000327028 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
VIPAS39-201ENST00000327028 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
VIPAS39-201ENST00000327028 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
VIPAS39-201ENST00000327028 SMIM11BQ8TCY0 68 aa6.43□□□□□ -1.38
VIPAS39-201ENST00000327028 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
VIPAS39-201ENST00000327028 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
VIPAS39-201ENST00000327028 PRYO14603 147 aa6.42□□□□□ -1.38
VIPAS39-201ENST00000327028 SCXQ7RTU7 201 aa6.42□□□□□ -1.38
VIPAS39-201ENST00000327028 KCNQ1DNQ9H478 68 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms