RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 M0R378 163 aa10.31□□□□□ -0.76
PTPMT1-201ENST00000326656 PRLHP81277 87 aa10.31□□□□□ -0.76
PTPMT1-201ENST00000326656 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
PTPMT1-201ENST00000326656 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
PTPMT1-201ENST00000326656 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
PTPMT1-201ENST00000326656 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
PTPMT1-201ENST00000326656 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
PTPMT1-201ENST00000326656 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
PTPMT1-201ENST00000326656 LINC00158P58513 81 aa10.27□□□□□ -0.77
PTPMT1-201ENST00000326656 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
PTPMT1-201ENST00000326656 Q8NDZ9 215 aa10.26□□□□□ -0.77
PTPMT1-201ENST00000326656 CHCHD1Q96BP2 118 aaKnown RBP10.26□□□□□ -0.77
PTPMT1-201ENST00000326656 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
PTPMT1-201ENST00000326656 SNAPINO95295 136 aa10.25□□□□□ -0.77
PTPMT1-201ENST00000326656 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
PTPMT1-201ENST00000326656 SVBPQ8N300 66 aa10.25□□□□□ -0.77
PTPMT1-201ENST00000326656 APOC3P02656 99 aa10.24□□□□□ -0.77
PTPMT1-201ENST00000326656 SPAG11AQ6PDA7 123 aa10.24□□□□□ -0.77
PTPMT1-201ENST00000326656 LINC00587B1AMM8 73 aa10.23□□□□□ -0.77
PTPMT1-201ENST00000326656 ATP6V1G1O75348 118 aa10.23□□□□□ -0.77
PTPMT1-201ENST00000326656 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
PTPMT1-201ENST00000326656 IFI27L1Q96BM0 104 aa10.23□□□□□ -0.77
PTPMT1-201ENST00000326656 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
PTPMT1-201ENST00000326656 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
PTPMT1-201ENST00000326656 HERV-K104P63124 156 aa10.21□□□□□ -0.77
PTPMT1-201ENST00000326656 RETNLBQ9BQ08 111 aa10.21□□□□□ -0.77
PTPMT1-201ENST00000326656 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
PTPMT1-201ENST00000326656 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
PTPMT1-201ENST00000326656 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
PTPMT1-201ENST00000326656 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
PTPMT1-201ENST00000326656 PRYO14603 147 aa10.19□□□□□ -0.78
PTPMT1-201ENST00000326656 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
PTPMT1-201ENST00000326656 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 KRTAP9-6A0A140TA67 174 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 SPRR1AP35321 89 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 C3orf22Q8N5N4 141 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
PTPMT1-201ENST00000326656 MEIG1Q5JSS6 88 aa10.17□□□□□ -0.78
PTPMT1-201ENST00000326656 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
PTPMT1-201ENST00000326656 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
PTPMT1-201ENST00000326656 MIR7-3HGQ8N6C7 128 aa10.16□□□□□ -0.78
PTPMT1-201ENST00000326656 MYMXA0A1B0GTQ4 84 aa10.15□□□□□ -0.78
PTPMT1-201ENST00000326656 S100A12P80511 92 aa10.15□□□□□ -0.78
PTPMT1-201ENST00000326656 HSBP1O75506 76 aa10.14□□□□□ -0.79
PTPMT1-201ENST00000326656 FP248Q71RG6 208 aaPredicted RBP10.14□□□□□ -0.79
PTPMT1-201ENST00000326656 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
PTPMT1-201ENST00000326656 KRTAP4-16G5E9R7 235 aaPredicted RBP10.13□□□□□ -0.79
PTPMT1-201ENST00000326656 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
PTPMT1-201ENST00000326656 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
PTPMT1-201ENST00000326656 ETDCA0A1B0GVM5 59 aa10.12□□□□□ -0.79
PTPMT1-201ENST00000326656 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
PTPMT1-201ENST00000326656 SMCR5Q8TEV8 140 aa10.12□□□□□ -0.79
PTPMT1-201ENST00000326656 NCR3O14931 201 aa10.1□□□□□ -0.79
PTPMT1-201ENST00000326656 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
PTPMT1-201ENST00000326656 TRBV10-3A0A0K0K1G6 114 aa10.09□□□□□ -0.79
PTPMT1-201ENST00000326656 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
PTPMT1-201ENST00000326656 SPINK1P00995 79 aa10.09□□□□□ -0.79
PTPMT1-201ENST00000326656 LINC00483Q53H64 154 aa10.09□□□□□ -0.79
PTPMT1-201ENST00000326656 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
PTPMT1-201ENST00000326656 LEPROTO15243 131 aa10.08□□□□□ -0.8
PTPMT1-201ENST00000326656 LEPROTL1O95214 131 aa10.08□□□□□ -0.8
PTPMT1-201ENST00000326656 PLNP26678 52 aa10.08□□□□□ -0.8
PTPMT1-201ENST00000326656 Q8NBF4 154 aa10.08□□□□□ -0.8
PTPMT1-201ENST00000326656 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
PTPMT1-201ENST00000326656 B5MCH6 92 aa10.05□□□□□ -0.8
PTPMT1-201ENST00000326656 NMUP48645 174 aa10.05□□□□□ -0.8
PTPMT1-201ENST00000326656 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
PTPMT1-201ENST00000326656 DAND5Q8N907 189 aa10.05□□□□□ -0.8
PTPMT1-201ENST00000326656 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
PTPMT1-201ENST00000326656 H0Y8G0 127 aa10.04□□□□□ -0.8
PTPMT1-201ENST00000326656 J3QQQ9 107 aa10.04□□□□□ -0.8
PTPMT1-201ENST00000326656 DDTP30046 118 aa10.04□□□□□ -0.8
PTPMT1-201ENST00000326656 HERVK_113P61574 105 aa10.04□□□□□ -0.8
PTPMT1-201ENST00000326656 NDUFC2O95298 119 aa10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 TRGC2P03986 189 aa10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 TSPEAR-AS2P59090 65 aa10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 RPS29P62273 56 aaKnown RBP10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
PTPMT1-201ENST00000326656 DPM2O94777 84 aa10.02□□□□□ -0.81
PTPMT1-201ENST00000326656 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
PTPMT1-201ENST00000326656 SERF1AO75920 110 aa10.01□□□□□ -0.81
PTPMT1-201ENST00000326656 KRTAP13-3Q3SY46 172 aa10.01□□□□□ -0.81
PTPMT1-201ENST00000326656 Q6ZRX8 168 aa10.01□□□□□ -0.81
PTPMT1-201ENST00000326656 IGLV6-57P01721 117 aa10□□□□□ -0.81
PTPMT1-201ENST00000326656 LINC00310P59036 64 aa10□□□□□ -0.81
PTPMT1-201ENST00000326656 ERC2-IT1O76042 136 aa9.99□□□□□ -0.81
PTPMT1-201ENST00000326656 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
PTPMT1-201ENST00000326656 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
PTPMT1-201ENST00000326656 S100A7L2Q5SY68 101 aa9.99□□□□□ -0.81
PTPMT1-201ENST00000326656 IGKCP01834 107 aa9.98□□□□□ -0.81
PTPMT1-201ENST00000326656 Q9BRP9 147 aa9.98□□□□□ -0.81
PTPMT1-201ENST00000326656 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
PTPMT1-201ENST00000326656 MOBPQ13875 183 aa9.97□□□□□ -0.81
PTPMT1-201ENST00000326656 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
PTPMT1-201ENST00000326656 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
PTPMT1-201ENST00000326656 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms