RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CDSNQ15517 529 aa5.64□□□□□ -1.51
CIITA-201ENST00000324288 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
CIITA-201ENST00000324288 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
CIITA-201ENST00000324288 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
CIITA-201ENST00000324288 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
CIITA-201ENST00000324288 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
CIITA-201ENST00000324288 NSD1Q96L73 2696 aaPredicted RBP5.63□□□□□ -1.51
CIITA-201ENST00000324288 Q6ZTC4 211 aa5.63□□□□□ -1.51
CIITA-201ENST00000324288 MUC7Q8TAX7 377 aa5.62□□□□□ -1.51
CIITA-201ENST00000324288 KRTAP10-9P60411 292 aa5.62□□□□□ -1.51
CIITA-201ENST00000324288 LINC00337Q8N6G1 96 aa5.62□□□□□ -1.51
CIITA-201ENST00000324288 SETXQ7Z333 2677 aaKnown RBP5.61□□□□□ -1.51
CIITA-201ENST00000324288 A0A096LNJ9 63 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 AVPP01185 164 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 C7orf65Q6ZTY9 151 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 FSHBP01225 129 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 A0A1B0GU69 56 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 TEX15Q9BXT5 2789 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
CIITA-201ENST00000324288 ODF3L2Q3SX64 289 aa5.6□□□□□ -1.51
CIITA-201ENST00000324288 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
CIITA-201ENST00000324288 FSTL3O95633 263 aa5.6□□□□□ -1.51
CIITA-201ENST00000324288 EGFEM1PQ0D2K5 195 aa5.6□□□□□ -1.51
CIITA-201ENST00000324288 LINC01561Q8N1V8 128 aa5.6□□□□□ -1.51
CIITA-201ENST00000324288 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.52
CIITA-201ENST00000324288 FLNAP21333 2647 aaKnown RBP5.59□□□□□ -1.52
CIITA-201ENST00000324288 ZNF292O60281 2723 aa5.58□□□□□ -1.52
CIITA-201ENST00000324288 FAM19A4Q96LR4 140 aa5.58□□□□□ -1.52
CIITA-201ENST00000324288 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
CIITA-201ENST00000324288 AMELXQ99217 191 aa5.58□□□□□ -1.52
CIITA-201ENST00000324288 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
CIITA-201ENST00000324288 CNFNQ9BYD5 112 aa5.58□□□□□ -1.52
CIITA-201ENST00000324288 FHL2Q14192 279 aa5.57□□□□□ -1.52
CIITA-201ENST00000324288 MUC22E2RYF6 1773 aaPredicted RBP5.57□□□□□ -1.52
CIITA-201ENST00000324288 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
CIITA-201ENST00000324288 MDFIQ99750 246 aa5.57□□□□□ -1.52
CIITA-201ENST00000324288 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
CIITA-201ENST00000324288 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
CIITA-201ENST00000324288 TM2D3Q9BRN9 247 aa5.56□□□□□ -1.52
CIITA-201ENST00000324288 CXCL6P80162 114 aa5.56□□□□□ -1.52
CIITA-201ENST00000324288 SMCR5Q8TEV8 140 aa5.55□□□□□ -1.52
CIITA-201ENST00000324288 MOBPQ13875 183 aa5.55□□□□□ -1.52
CIITA-201ENST00000324288 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
CIITA-201ENST00000324288 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
CIITA-201ENST00000324288 HELZ2Q9BYK8 2649 aaKnown RBP5.55□□□□□ -1.52
CIITA-201ENST00000324288 C8orf87E5RJ46 101 aa5.54□□□□□ -1.52
CIITA-201ENST00000324288 SSBP3-AS1Q7Z2R9 100 aa5.54□□□□□ -1.52
CIITA-201ENST00000324288 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
CIITA-201ENST00000324288 Q8N2B8 174 aa5.54□□□□□ -1.52
CIITA-201ENST00000324288 Q6ZRU5 148 aa5.54□□□□□ -1.52
CIITA-201ENST00000324288 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
CIITA-201ENST00000324288 RPL37AP61513 92 aaKnown RBP5.53□□□□□ -1.52
CIITA-201ENST00000324288 GCN1Q92616 2671 aaKnown RBP5.53□□□□□ -1.52
CIITA-201ENST00000324288 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
CIITA-201ENST00000324288 ACYP2P14621 99 aa5.52□□□□□ -1.53
CIITA-201ENST00000324288 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
CIITA-201ENST00000324288 A8MUN3 132 aa5.51□□□□□ -1.53
CIITA-201ENST00000324288 C22orf24Q9Y442 160 aa5.5□□□□□ -1.53
CIITA-201ENST00000324288 ST20-AS1Q8NBB2 130 aa5.5□□□□□ -1.53
CIITA-201ENST00000324288 NHLRC4P0CG21 123 aaPredicted RBP5.49□□□□□ -1.53
CIITA-201ENST00000324288 Q6ZQT0 140 aa5.47□□□□□ -1.53
CIITA-201ENST00000324288 FHL3Q13643 280 aa5.47□□□□□ -1.53
CIITA-201ENST00000324288 A0A1W2PPR1 153 aa5.46□□□□□ -1.54
CIITA-201ENST00000324288 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
CIITA-201ENST00000324288 LINC00336Q6ZUF6 198 aa5.45□□□□□ -1.54
CIITA-201ENST00000324288 KIF25-AS1Q9Y6Z4 181 aa5.45□□□□□ -1.54
CIITA-201ENST00000324288 SRCAPQ6ZRS2 3230 aa5.45□□□□□ -1.54
CIITA-201ENST00000324288 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
CIITA-201ENST00000324288 PHF5AQ7RTV0 110 aaKnown RBP5.45□□□□□ -1.54
CIITA-201ENST00000324288 LINC00167Q96N53 147 aa5.44□□□□□ -1.54
CIITA-201ENST00000324288 COA5Q86WW8 74 aa5.44□□□□□ -1.54
CIITA-201ENST00000324288 TP53AIP1Q9HCN2 124 aa5.44□□□□□ -1.54
CIITA-201ENST00000324288 TRANK1O15050 2925 aa5.43□□□□□ -1.54
CIITA-201ENST00000324288 LINC01546A6NGU7 62 aa5.43□□□□□ -1.54
CIITA-201ENST00000324288 UTP20O75691 2785 aaKnown RBP5.42□□□□□ -1.54
CIITA-201ENST00000324288 C11orf72Q8NBR9 251 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 Q8NBF4 154 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 LINC01600Q96MT4 127 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 Q96NJ1 140 aa5.42□□□□□ -1.54
CIITA-201ENST00000324288 NBEAL2Q6ZNJ1 2754 aa5.41□□□□□ -1.54
CIITA-201ENST00000324288 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
CIITA-201ENST00000324288 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
CIITA-201ENST00000324288 EPM2AB3EWF7 344 aa5.41□□□□□ -1.54
CIITA-201ENST00000324288 C16orf95Q9H693 158 aa5.41□□□□□ -1.54
CIITA-201ENST00000324288 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.54
CIITA-201ENST00000324288 A0A0G2JQZ4 141 aa5.4□□□□□ -1.54
CIITA-201ENST00000324288 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
CIITA-201ENST00000324288 KMT2BQ9UMN6 2715 aaPredicted RBP5.4□□□□□ -1.54
CIITA-201ENST00000324288 TRBV7-4A0A0J9YYF1 115 aa5.4□□□□□ -1.55
CIITA-201ENST00000324288 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.55
CIITA-201ENST00000324288 IGHV3OR16-9A0A0B4J2B5 98 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 C16orf90A8MZG2 172 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 COX8CQ7Z4L0 72 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 LINC00313P59037 77 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 RTL8CO15255 209 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 F8WDY8 70 aa5.39□□□□□ -1.55
CIITA-201ENST00000324288 BCE1O60756 84 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms