RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MIFP14174 115 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 SPAG11BQ08648 103 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 LELP1Q5T871 98 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 LYPD5Q6UWN5 251 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 UNQ6190/PRO20217Q6UXQ8 127 aa5.89□□□□□ -1.47
CLK1-201ENST00000321356 A0A087WVE0 104 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 IGLV6-57P01721 117 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 C6orf223Q8N319 242 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 GVQW2A0A096LPI5 108 aaPredicted RBP5.88□□□□□ -1.47
CLK1-201ENST00000321356 CYSRT1A8MQ03 144 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 USP17L23D6RBM5 183 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 SERP2Q8N6R1 65 aa5.88□□□□□ -1.47
CLK1-201ENST00000321356 NOTCH2Q04721 2471 aa5.87□□□□□ -1.47
CLK1-201ENST00000321356 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
CLK1-201ENST00000321356 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
CLK1-201ENST00000321356 LOC110117498A0A087WWA1 95 aa5.86□□□□□ -1.47
CLK1-201ENST00000321356 hADV29S1A0JD25 119 aa5.86□□□□□ -1.47
CLK1-201ENST00000321356 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
CLK1-201ENST00000321356 SPART-AS1P0CW21 52 aa5.86□□□□□ -1.47
CLK1-201ENST00000321356 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
CLK1-201ENST00000321356 TRBV10-3A0A0K0K1G6 114 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 J3QKU1 62 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 ENHOQ6UWT2 76 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 Q6ZQT0 140 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 KLK12Q9UKR0 248 aa5.85□□□□□ -1.47
CLK1-201ENST00000321356 TEP1Q99973 2627 aaKnown RBP5.84□□□□□ -1.47
CLK1-201ENST00000321356 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
CLK1-201ENST00000321356 ATRQ13535 2644 aa5.84□□□□□ -1.47
CLK1-201ENST00000321356 H3BQ85 93 aa5.83□□□□□ -1.48
CLK1-201ENST00000321356 HTN3P15516 51 aa5.83□□□□□ -1.48
CLK1-201ENST00000321356 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
CLK1-201ENST00000321356 C6orf48Q9UBA6 75 aa5.83□□□□□ -1.48
CLK1-201ENST00000321356 WIPF1O43516 503 aa5.83□□□□□ -1.48
CLK1-201ENST00000321356 Q6ZQY7 126 aa5.82□□□□□ -1.48
CLK1-201ENST00000321356 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
CLK1-201ENST00000321356 HECTD1Q9ULT8 2610 aa5.82□□□□□ -1.48
CLK1-201ENST00000321356 TRAV23DV6A0A075B6W5 121 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 J3QL48 77 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 PDE6GP18545 87 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 KRTAP26-1Q6PEX3 210 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 WFDC9Q8NEX5 89 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 M0R2N4 97 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 TMEM258P61165 79 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
CLK1-201ENST00000321356 DIRC1Q969H9 104 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 LAMTOR3Q9UHA4 124 aa5.81□□□□□ -1.48
CLK1-201ENST00000321356 INAFM1C9JVW0 142 aa5.8□□□□□ -1.48
CLK1-201ENST00000321356 H3BNG1 76 aa5.8□□□□□ -1.48
CLK1-201ENST00000321356 J3KT08 172 aa5.8□□□□□ -1.48
CLK1-201ENST00000321356 XAGE1AQ9HD64 81 aa5.8□□□□□ -1.48
CLK1-201ENST00000321356 ZNF73O43830 326 aaPredicted RBP5.79□□□□□ -1.48
CLK1-201ENST00000321356 GHRHP01286 108 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 VPREB1P12018 145 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 ELOF1P60002 83 aaKnown RBP5.79□□□□□ -1.48
CLK1-201ENST00000321356 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
CLK1-201ENST00000321356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.79□□□□□ -1.48
CLK1-201ENST00000321356 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 BCE1O60756 84 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 LINC01547P58512 204 aaPredicted RBP5.79□□□□□ -1.48
CLK1-201ENST00000321356 EGFEM1PQ0D2K5 195 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 Q6ZVQ6 151 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
CLK1-201ENST00000321356 COX7BP24311 80 aa5.78□□□□□ -1.48
CLK1-201ENST00000321356 WFDC10BQ8IUB3 73 aa5.78□□□□□ -1.48
CLK1-201ENST00000321356 LOC107984640A0A0U1RRK4 108 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 KPRPQ5T749 579 aaPredicted RBP5.77□□□□□ -1.49
CLK1-201ENST00000321356 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 PKD1L1Q8TDX9 2849 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 M0R378 163 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 CXCL6P80162 114 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 HIGD2BQ4VC39 106 aa5.77□□□□□ -1.49
CLK1-201ENST00000321356 NDUFC2-KCTD14E9PQ53 114 aa5.76□□□□□ -1.49
CLK1-201ENST00000321356 Q6ZRU5 148 aa5.76□□□□□ -1.49
CLK1-201ENST00000321356 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
CLK1-201ENST00000321356 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
CLK1-201ENST00000321356 TRAV7A0A075B6U4 112 aa5.74□□□□□ -1.49
CLK1-201ENST00000321356 F8WDY8 70 aa5.74□□□□□ -1.49
CLK1-201ENST00000321356 HAMPP81172 84 aa5.74□□□□□ -1.49
CLK1-201ENST00000321356 TENM3Q9P273 2699 aa5.74□□□□□ -1.49
CLK1-201ENST00000321356 Q6ZTC4 211 aa5.73□□□□□ -1.49
CLK1-201ENST00000321356 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
CLK1-201ENST00000321356 ESRGQ1W209 222 aa5.73□□□□□ -1.49
CLK1-201ENST00000321356 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
CLK1-201ENST00000321356 RETNQ9HD89 108 aa5.73□□□□□ -1.49
CLK1-201ENST00000321356 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
CLK1-201ENST00000321356 Q6ZRP5 223 aa5.72□□□□□ -1.49
CLK1-201ENST00000321356 TRAV10A0A0B4J240 114 aa5.71□□□□□ -1.5
CLK1-201ENST00000321356 OXTP01178 125 aa5.71□□□□□ -1.5
CLK1-201ENST00000321356 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.5
CLK1-201ENST00000321356 KRTAP10-11P60412 298 aa5.71□□□□□ -1.5
CLK1-201ENST00000321356 KLKP1Q107X0 134 aa5.7□□□□□ -1.5
CLK1-201ENST00000321356 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
CLK1-201ENST00000321356 H7BZZ5 65 aa5.69□□□□□ -1.5
CLK1-201ENST00000321356 SYCNQ0VAF6 134 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms