RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 LINC00167Q96N53 147 aa8.94□□□□□ -0.98
TUBA3D-201ENST00000321253 PMCHL2Q9BQD1 86 aa8.93□□□□□ -0.98
TUBA3D-201ENST00000321253 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 H0Y9J4 135 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 IGKCP01834 107 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 HERVK_113P61574 105 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 HERV-K104P63124 156 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
TUBA3D-201ENST00000321253 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
TUBA3D-201ENST00000321253 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
TUBA3D-201ENST00000321253 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
TUBA3D-201ENST00000321253 LOC105371267A0A1B0GV96 52 aa8.9□□□□□ -0.98
TUBA3D-201ENST00000321253 PLEKHB2Q96CS7 222 aa8.9□□□□□ -0.98
TUBA3D-201ENST00000321253 LINC00587B1AMM8 73 aa8.9□□□□□ -0.99
TUBA3D-201ENST00000321253 LEPROTO15243 131 aa8.9□□□□□ -0.99
TUBA3D-201ENST00000321253 SMIM13P0DJ93 91 aa8.9□□□□□ -0.99
TUBA3D-201ENST00000321253 VPREB1P12018 145 aa8.9□□□□□ -0.99
TUBA3D-201ENST00000321253 ZNF861PO60384 105 aa8.89□□□□□ -0.99
TUBA3D-201ENST00000321253 BCE1O60756 84 aa8.89□□□□□ -0.99
TUBA3D-201ENST00000321253 IGKV2-28A0A075B6P5 120 aa8.88□□□□□ -0.99
TUBA3D-201ENST00000321253 SYS1-DBNDD2H3BUS1 97 aa8.88□□□□□ -0.99
TUBA3D-201ENST00000321253 IGKV2D-28P01615 120 aa8.88□□□□□ -0.99
TUBA3D-201ENST00000321253 J3QQQ9 107 aa8.87□□□□□ -0.99
TUBA3D-201ENST00000321253 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
TUBA3D-201ENST00000321253 RPL28P46779 137 aaKnown RBP8.87□□□□□ -0.99
TUBA3D-201ENST00000321253 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
TUBA3D-201ENST00000321253 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
TUBA3D-201ENST00000321253 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
TUBA3D-201ENST00000321253 TNXBP22105 4242 aa8.86□□□□□ -0.99
TUBA3D-201ENST00000321253 S100A6P06703 90 aa8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 NMUP48645 174 aa8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 IGLV1-50A0A075B6I6 118 aa8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 UBE2AP49459 152 aa8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 Q8NDZ9 215 aa8.85□□□□□ -0.99
TUBA3D-201ENST00000321253 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
TUBA3D-201ENST00000321253 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
TUBA3D-201ENST00000321253 LINC01545Q5VT33 79 aa8.83□□□□□ -1
TUBA3D-201ENST00000321253 E9PLD3 99 aa8.82□□□□□ -1
TUBA3D-201ENST00000321253 M0R378 163 aa8.82□□□□□ -1
TUBA3D-201ENST00000321253 PRR26Q8N8Z3 221 aa8.82□□□□□ -1
TUBA3D-201ENST00000321253 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
TUBA3D-201ENST00000321253 KRTDAPP60985 99 aa8.81□□□□□ -1
TUBA3D-201ENST00000321253 TMEM126AQ9H061 195 aa8.81□□□□□ -1
TUBA3D-201ENST00000321253 TMEM238C9JI98 176 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 C3orf79P0CE67 100 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 HMCN2Q8NDA2 5059 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 DAND5Q8N907 189 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
TUBA3D-201ENST00000321253 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
TUBA3D-201ENST00000321253 NCR3O14931 201 aa8.79□□□□□ -1
TUBA3D-201ENST00000321253 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
TUBA3D-201ENST00000321253 SNRPEP62304 92 aaKnown RBP8.79□□□□□ -1
TUBA3D-201ENST00000321253 C20orf202A1L168 122 aa8.78□□□□□ -1
TUBA3D-201ENST00000321253 PRLHP81277 87 aa8.78□□□□□ -1
TUBA3D-201ENST00000321253 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
TUBA3D-201ENST00000321253 C5orf52A6NGY3 159 aa8.77□□□□□ -1.01
TUBA3D-201ENST00000321253 A0A0J9YXY3 114 aa8.76□□□□□ -1.01
TUBA3D-201ENST00000321253 LOC107984156A0A0G2JMH3 177 aa8.75□□□□□ -1.01
TUBA3D-201ENST00000321253 S100A12P80511 92 aa8.75□□□□□ -1.01
TUBA3D-201ENST00000321253 ARL17AQ8IVW1 177 aa8.75□□□□□ -1.01
TUBA3D-201ENST00000321253 PRYO14603 147 aa8.75□□□□□ -1.01
TUBA3D-201ENST00000321253 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
TUBA3D-201ENST00000321253 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
TUBA3D-201ENST00000321253 S100A2P29034 98 aa8.73□□□□□ -1.01
TUBA3D-201ENST00000321253 AKR1D1P51857 326 aa8.73□□□□□ -1.01
TUBA3D-201ENST00000321253 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
TUBA3D-201ENST00000321253 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 CRYGAP11844 174 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 NPC2P61916 151 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 ADAMTSL4-AS1Q5T5F5 129 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 HIST3H2BBQ8N257 126 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
TUBA3D-201ENST00000321253 NDUFC2O95298 119 aa8.71□□□□□ -1.01
TUBA3D-201ENST00000321253 ETDCA0A1B0GVM5 59 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 TIMM17BO60830 172 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 DDTP30046 118 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 A0A087X002 238 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 ATOH7Q8N100 152 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 TTTY13Q9BZ97 58 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
TUBA3D-201ENST00000321253 SPRR1AP35321 89 aa8.69□□□□□ -1.02
TUBA3D-201ENST00000321253 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
TUBA3D-201ENST00000321253 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
TUBA3D-201ENST00000321253 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
TUBA3D-201ENST00000321253 LITAFQ99732 161 aa8.68□□□□□ -1.02
TUBA3D-201ENST00000321253 HIST1H2BLQ99880 126 aa8.68□□□□□ -1.02
TUBA3D-201ENST00000321253 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
TUBA3D-201ENST00000321253 ANKRD39Q53RE8 183 aa8.67□□□□□ -1.02
TUBA3D-201ENST00000321253 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
TUBA3D-201ENST00000321253 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
TUBA3D-201ENST00000321253 KRTAP4-16G5E9R7 235 aaPredicted RBP8.65□□□□□ -1.02
TUBA3D-201ENST00000321253 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
TUBA3D-201ENST00000321253 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
TUBA3D-201ENST00000321253 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms