RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 PET117Q6UWS5 81 aa11.53□□□□□ -0.56
CIRBP-201ENST00000320936 TP73-AS1Q9UF72 201 aa11.53□□□□□ -0.56
CIRBP-201ENST00000320936 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 OXTP01178 125 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 C3orf79P0CE67 100 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 PLA2G2DQ9UNK4 145 aa11.52□□□□□ -0.57
CIRBP-201ENST00000320936 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
CIRBP-201ENST00000320936 C20orf202A1L168 122 aa11.49□□□□□ -0.57
CIRBP-201ENST00000320936 RPL37AP8A6NKH3 93 aa11.49□□□□□ -0.57
CIRBP-201ENST00000320936 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
CIRBP-201ENST00000320936 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
CIRBP-201ENST00000320936 RPL24P83731 157 aaKnown RBP11.49□□□□□ -0.57
CIRBP-201ENST00000320936 LRP1Q07954 4544 aaKnown RBP11.49□□□□□ -0.57
CIRBP-201ENST00000320936 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
CIRBP-201ENST00000320936 NMUP48645 174 aa11.48□□□□□ -0.57
CIRBP-201ENST00000320936 REG3GQ6UW15 175 aa11.48□□□□□ -0.57
CIRBP-201ENST00000320936 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
CIRBP-201ENST00000320936 S100A6P06703 90 aa11.47□□□□□ -0.57
CIRBP-201ENST00000320936 S100A2P29034 98 aa11.47□□□□□ -0.57
CIRBP-201ENST00000320936 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
CIRBP-201ENST00000320936 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.57
CIRBP-201ENST00000320936 E9PLD3 99 aa11.46□□□□□ -0.57
CIRBP-201ENST00000320936 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.57
CIRBP-201ENST00000320936 VPREB1P12018 145 aa11.45□□□□□ -0.58
CIRBP-201ENST00000320936 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
CIRBP-201ENST00000320936 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
CIRBP-201ENST00000320936 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
CIRBP-201ENST00000320936 BOD1L2Q8IYS8 172 aa11.43□□□□□ -0.58
CIRBP-201ENST00000320936 DAND5Q8N907 189 aa11.43□□□□□ -0.58
CIRBP-201ENST00000320936 HIST3H2BBQ8N257 126 aa11.42□□□□□ -0.58
CIRBP-201ENST00000320936 Q8NDZ9 215 aa11.41□□□□□ -0.58
CIRBP-201ENST00000320936 BCE1O60756 84 aa11.4□□□□□ -0.58
CIRBP-201ENST00000320936 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
CIRBP-201ENST00000320936 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
CIRBP-201ENST00000320936 NCR3O14931 201 aa11.39□□□□□ -0.59
CIRBP-201ENST00000320936 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
CIRBP-201ENST00000320936 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
CIRBP-201ENST00000320936 H0Y9J4 135 aa11.38□□□□□ -0.59
CIRBP-201ENST00000320936 HERC1Q15751 4861 aa11.38□□□□□ -0.59
CIRBP-201ENST00000320936 ZNF815PA8K554 130 aa11.37□□□□□ -0.59
CIRBP-201ENST00000320936 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
CIRBP-201ENST00000320936 AKR1D1P51857 326 aa11.37□□□□□ -0.59
CIRBP-201ENST00000320936 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 IGKV2D-26A0A0A0MRZ7 120 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 M0R378 163 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 ZNF861PO60384 105 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 UBE2AP49459 152 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 LINC01600Q96MT4 127 aa11.36□□□□□ -0.59
CIRBP-201ENST00000320936 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
CIRBP-201ENST00000320936 NPC2P61916 151 aa11.35□□□□□ -0.59
CIRBP-201ENST00000320936 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
CIRBP-201ENST00000320936 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
CIRBP-201ENST00000320936 TTTY13Q9BZ97 58 aa11.34□□□□□ -0.59
CIRBP-201ENST00000320936 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
CIRBP-201ENST00000320936 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CIRBP-201ENST00000320936 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
CIRBP-201ENST00000320936 FAM19A1Q7Z5A9 133 aa11.32□□□□□ -0.6
CIRBP-201ENST00000320936 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
CIRBP-201ENST00000320936 PRLHP81277 87 aa11.3□□□□□ -0.6
CIRBP-201ENST00000320936 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
CIRBP-201ENST00000320936 S100A12P80511 92 aa11.29□□□□□ -0.6
CIRBP-201ENST00000320936 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
CIRBP-201ENST00000320936 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
CIRBP-201ENST00000320936 TRBV10-3A0A0K0K1G6 114 aa11.28□□□□□ -0.6
CIRBP-201ENST00000320936 TIMM17BO60830 172 aa11.28□□□□□ -0.6
CIRBP-201ENST00000320936 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
CIRBP-201ENST00000320936 C5orf52A6NGY3 159 aa11.27□□□□□ -0.61
CIRBP-201ENST00000320936 PRYO14603 147 aa11.27□□□□□ -0.61
CIRBP-201ENST00000320936 SCGB1D1O95968 90 aa11.27□□□□□ -0.61
CIRBP-201ENST00000320936 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
CIRBP-201ENST00000320936 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
CIRBP-201ENST00000320936 LITAFQ99732 161 aa11.26□□□□□ -0.61
CIRBP-201ENST00000320936 TRBV10-2A0A0K0K1G8 114 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 NDUFC2O95298 119 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 DDTP30046 118 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 PCP2Q8IVA1 136 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
CIRBP-201ENST00000320936 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
CIRBP-201ENST00000320936 KRTAP1-4P0C5Y4 121 aa11.23□□□□□ -0.61
CIRBP-201ENST00000320936 KRTAP10-8P60410 259 aa11.23□□□□□ -0.61
CIRBP-201ENST00000320936 HIGD2AQ9BW72 106 aa11.23□□□□□ -0.61
CIRBP-201ENST00000320936 TNXBP22105 4242 aa11.23□□□□□ -0.61
CIRBP-201ENST00000320936 ETDCA0A1B0GVM5 59 aa11.22□□□□□ -0.61
CIRBP-201ENST00000320936 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
CIRBP-201ENST00000320936 SPANXCQ9NY87 97 aa11.21□□□□□ -0.61
CIRBP-201ENST00000320936 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
CIRBP-201ENST00000320936 LINC00337Q8N6G1 96 aa11.19□□□□□ -0.62
CIRBP-201ENST00000320936 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
CIRBP-201ENST00000320936 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
CIRBP-201ENST00000320936 OR13C6PQ8NH95 151 aa11.18□□□□□ -0.62
CIRBP-201ENST00000320936 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
CIRBP-201ENST00000320936 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
CIRBP-201ENST00000320936 SPRR1AP35321 89 aa11.16□□□□□ -0.62
CIRBP-201ENST00000320936 ANAPC11Q9NYG5 84 aa11.15□□□□□ -0.62
CIRBP-201ENST00000320936 TMA7Q9Y2S6 64 aaKnown RBP11.15□□□□□ -0.62
CIRBP-201ENST00000320936 CRYGAP11844 174 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms