RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
SERF1A-201ENST00000317633 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
SERF1A-201ENST00000317633 RPS10P5Q9NQ39 176 aa11.63□□□□□ -0.55
SERF1A-201ENST00000317633 LCE2AQ5TA79 106 aaPredicted RBP11.62□□□□□ -0.55
SERF1A-201ENST00000317633 C18orf32Q8TCD1 76 aa11.62□□□□□ -0.55
SERF1A-201ENST00000317633 IGLV7-46A0A075B6I9 117 aa11.61□□□□□ -0.55
SERF1A-201ENST00000317633 BAGE3Q86Y29 109 aa11.61□□□□□ -0.55
SERF1A-201ENST00000317633 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
SERF1A-201ENST00000317633 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
SERF1A-201ENST00000317633 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
SERF1A-201ENST00000317633 LINC00158P58513 81 aa11.59□□□□□ -0.55
SERF1A-201ENST00000317633 PMCHL1Q16048 86 aa11.59□□□□□ -0.55
SERF1A-201ENST00000317633 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
SERF1A-201ENST00000317633 IFITM2Q01629 132 aa11.58□□□□□ -0.56
SERF1A-201ENST00000317633 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
SERF1A-201ENST00000317633 COMMD7Q86VX2 200 aa11.58□□□□□ -0.56
SERF1A-201ENST00000317633 SPAG11AQ6PDA7 123 aa11.57□□□□□ -0.56
SERF1A-201ENST00000317633 C3orf22Q8N5N4 141 aa11.57□□□□□ -0.56
SERF1A-201ENST00000317633 Q8NDZ9 215 aa11.57□□□□□ -0.56
SERF1A-201ENST00000317633 CHTOPQ9Y3Y2 248 aaKnown RBP11.56□□□□□ -0.56
SERF1A-201ENST00000317633 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
SERF1A-201ENST00000317633 ATP6V1G1O75348 118 aa11.54□□□□□ -0.56
SERF1A-201ENST00000317633 SPRR4Q96PI1 79 aa11.54□□□□□ -0.56
SERF1A-201ENST00000317633 LCE2CQ5TA81 110 aa11.53□□□□□ -0.56
SERF1A-201ENST00000317633 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
SERF1A-201ENST00000317633 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
SERF1A-201ENST00000317633 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
SERF1A-201ENST00000317633 KRTAP9-2Q9BYQ4 174 aa11.51□□□□□ -0.57
SERF1A-201ENST00000317633 MUC17Q685J3 4493 aa11.5□□□□□ -0.57
SERF1A-201ENST00000317633 PRYO14603 147 aa11.5□□□□□ -0.57
SERF1A-201ENST00000317633 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
SERF1A-201ENST00000317633 MEIG1Q5JSS6 88 aa11.49□□□□□ -0.57
SERF1A-201ENST00000317633 FP248Q71RG6 208 aaPredicted RBP11.49□□□□□ -0.57
SERF1A-201ENST00000317633 BOD1L2Q8IYS8 172 aa11.49□□□□□ -0.57
SERF1A-201ENST00000317633 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
SERF1A-201ENST00000317633 LINC00337Q8N6G1 96 aa11.48□□□□□ -0.57
SERF1A-201ENST00000317633 FAT4Q6V0I7 4981 aa11.48□□□□□ -0.57
SERF1A-201ENST00000317633 LINC00587B1AMM8 73 aa11.47□□□□□ -0.57
SERF1A-201ENST00000317633 HERV-K104P63124 156 aa11.47□□□□□ -0.57
SERF1A-201ENST00000317633 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
SERF1A-201ENST00000317633 CHCHD1Q96BP2 118 aaKnown RBP11.46□□□□□ -0.57
SERF1A-201ENST00000317633 ETDCA0A1B0GVM5 59 aa11.45□□□□□ -0.58
SERF1A-201ENST00000317633 S100A12P80511 92 aa11.45□□□□□ -0.58
SERF1A-201ENST00000317633 MIR7-3HGQ8N6C7 128 aa11.45□□□□□ -0.58
SERF1A-201ENST00000317633 KCNQ1DNQ9H478 68 aa11.45□□□□□ -0.58
SERF1A-201ENST00000317633 NCR3O14931 201 aa11.44□□□□□ -0.58
SERF1A-201ENST00000317633 APOC3P02656 99 aa11.44□□□□□ -0.58
SERF1A-201ENST00000317633 SPRR1AP35321 89 aa11.44□□□□□ -0.58
SERF1A-201ENST00000317633 Q8NBF4 154 aa11.44□□□□□ -0.58
SERF1A-201ENST00000317633 SMCR5Q8TEV8 140 aa11.44□□□□□ -0.58
SERF1A-201ENST00000317633 SNAPINO95295 136 aa11.43□□□□□ -0.58
SERF1A-201ENST00000317633 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
SERF1A-201ENST00000317633 SPINK1P00995 79 aa11.42□□□□□ -0.58
SERF1A-201ENST00000317633 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
SERF1A-201ENST00000317633 DAND5Q8N907 189 aa11.42□□□□□ -0.58
SERF1A-201ENST00000317633 MYMXA0A1B0GTQ4 84 aa11.41□□□□□ -0.58
SERF1A-201ENST00000317633 SVBPQ8N300 66 aa11.41□□□□□ -0.58
SERF1A-201ENST00000317633 KRTAP4-16G5E9R7 235 aaPredicted RBP11.4□□□□□ -0.58
SERF1A-201ENST00000317633 NDUFA12Q9UI09 145 aa11.4□□□□□ -0.58
SERF1A-201ENST00000317633 TRBV10-3A0A0K0K1G6 114 aa11.39□□□□□ -0.59
SERF1A-201ENST00000317633 HSBP1O75506 76 aa11.37□□□□□ -0.59
SERF1A-201ENST00000317633 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
SERF1A-201ENST00000317633 KRTAP13-3Q3SY46 172 aa11.36□□□□□ -0.59
SERF1A-201ENST00000317633 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
SERF1A-201ENST00000317633 B5MCH6 92 aa11.34□□□□□ -0.59
SERF1A-201ENST00000317633 FAM19A2Q8N3H0 131 aa11.34□□□□□ -0.59
SERF1A-201ENST00000317633 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 H0Y8G0 127 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 DDTP30046 118 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
SERF1A-201ENST00000317633 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
SERF1A-201ENST00000317633 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
SERF1A-201ENST00000317633 IGLV9-49A0A0B4J1Y8 123 aa11.31□□□□□ -0.6
SERF1A-201ENST00000317633 LEPROTO15243 131 aa11.31□□□□□ -0.6
SERF1A-201ENST00000317633 MOBPQ13875 183 aa11.31□□□□□ -0.6
SERF1A-201ENST00000317633 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
SERF1A-201ENST00000317633 MIEN1Q9BRT3 115 aa11.31□□□□□ -0.6
SERF1A-201ENST00000317633 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
SERF1A-201ENST00000317633 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
SERF1A-201ENST00000317633 Q6ZRX8 168 aa11.29□□□□□ -0.6
SERF1A-201ENST00000317633 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
SERF1A-201ENST00000317633 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
SERF1A-201ENST00000317633 PLNP26678 52 aa11.28□□□□□ -0.6
SERF1A-201ENST00000317633 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
SERF1A-201ENST00000317633 J3QQQ9 107 aa11.27□□□□□ -0.61
SERF1A-201ENST00000317633 NMUP48645 174 aa11.27□□□□□ -0.61
SERF1A-201ENST00000317633 HERVK_113P61574 105 aa11.27□□□□□ -0.61
SERF1A-201ENST00000317633 S100A7L2Q5SY68 101 aa11.27□□□□□ -0.61
SERF1A-201ENST00000317633 SLC25A20O43772 301 aa11.26□□□□□ -0.61
SERF1A-201ENST00000317633 JOSD1Q15040 202 aaPredicted RBP11.26□□□□□ -0.61
SERF1A-201ENST00000317633 Q8N377 158 aa11.26□□□□□ -0.61
SERF1A-201ENST00000317633 Q9BRP9 147 aa11.26□□□□□ -0.61
SERF1A-201ENST00000317633 NDUFC2O95298 119 aa11.25□□□□□ -0.61
SERF1A-201ENST00000317633 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
SERF1A-201ENST00000317633 LINC01547P58512 204 aaPredicted RBP11.24□□□□□ -0.61
SERF1A-201ENST00000317633 DPM2O94777 84 aa11.23□□□□□ -0.61
SERF1A-201ENST00000317633 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
SERF1A-201ENST00000317633 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms