RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 S100A7L2Q5SY68 101 aa13.37□□□□□ -0.27
ZNF554-201ENST00000317243 GYPEP15421 78 aa13.36□□□□□ -0.27
ZNF554-201ENST00000317243 PRR3P79522 188 aaKnown RBP13.36□□□□□ -0.27
ZNF554-201ENST00000317243 FAM236DA0A1B0GTK5 79 aa13.36□□□□□ -0.27
ZNF554-201ENST00000317243 FAM236CP0DP71 79 aa13.36□□□□□ -0.27
ZNF554-201ENST00000317243 NDUFC2-KCTD14E9PQ53 114 aa13.35□□□□□ -0.27
ZNF554-201ENST00000317243 LINC00959A0A1B0GUT2 108 aa13.34□□□□□ -0.27
ZNF554-201ENST00000317243 ATP5EP2Q5VTU8 51 aa13.33□□□□□ -0.27
ZNF554-201ENST00000317243 JMJD7-PLA2G4BH0Y9G9 81 aa13.33□□□□□ -0.28
ZNF554-201ENST00000317243 Q8N814 137 aa13.32□□□□□ -0.28
ZNF554-201ENST00000317243 UBL5Q9BZL1 73 aa13.32□□□□□ -0.28
ZNF554-201ENST00000317243 H7BZZ5 65 aa13.31□□□□□ -0.28
ZNF554-201ENST00000317243 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
ZNF554-201ENST00000317243 TENM3Q9P273 2699 aa13.3□□□□□ -0.28
ZNF554-201ENST00000317243 LINC00336Q6ZUF6 198 aa13.3□□□□□ -0.28
ZNF554-201ENST00000317243 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
ZNF554-201ENST00000317243 TMEM256-PLSCR3K7ERE1 68 aa13.29□□□□□ -0.28
ZNF554-201ENST00000317243 NANOS2P60321 138 aaKnown RBP13.29□□□□□ -0.28
ZNF554-201ENST00000317243 MRAPQ8TCY5 172 aa13.28□□□□□ -0.28
ZNF554-201ENST00000317243 LINC00167Q96N53 147 aa13.28□□□□□ -0.28
ZNF554-201ENST00000317243 SNURFQ9Y675 71 aa13.27□□□□□ -0.28
ZNF554-201ENST00000317243 MAST4O15021 2626 aa13.27□□□□□ -0.28
ZNF554-201ENST00000317243 NOTCH1P46531 2555 aa13.26□□□□□ -0.29
ZNF554-201ENST00000317243 SERP1Q9Y6X1 66 aa13.26□□□□□ -0.29
ZNF554-201ENST00000317243 IGHV4-28A0A0C4DH34 117 aa13.26□□□□□ -0.29
ZNF554-201ENST00000317243 LINC00612Q8N6U2 182 aa13.26□□□□□ -0.29
ZNF554-201ENST00000317243 HTN3P15516 51 aa13.25□□□□□ -0.29
ZNF554-201ENST00000317243 C9orf66Q5T8R8 295 aa13.25□□□□□ -0.29
ZNF554-201ENST00000317243 CMYA5Q8N3K9 4069 aa13.24□□□□□ -0.29
ZNF554-201ENST00000317243 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
ZNF554-201ENST00000317243 TRBV10-3A0A0K0K1G6 114 aa13.24□□□□□ -0.29
ZNF554-201ENST00000317243 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
ZNF554-201ENST00000317243 M0R2N4 97 aa13.24□□□□□ -0.29
ZNF554-201ENST00000317243 EPM2AB3EWF7 344 aa13.23□□□□□ -0.29
ZNF554-201ENST00000317243 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
ZNF554-201ENST00000317243 RMI2Q96E14 147 aa13.23□□□□□ -0.29
ZNF554-201ENST00000317243 TRAV7A0A075B6U4 112 aa13.23□□□□□ -0.29
ZNF554-201ENST00000317243 HAMPP81172 84 aa13.23□□□□□ -0.29
ZNF554-201ENST00000317243 Q8IZM0 81 aa13.22□□□□□ -0.29
ZNF554-201ENST00000317243 PRO0255Q9UI72 69 aa13.22□□□□□ -0.29
ZNF554-201ENST00000317243 PRO0628Q9UI54 55 aa13.21□□□□□ -0.29
ZNF554-201ENST00000317243 C6orf99Q4VX62 202 aa13.2□□□□□ -0.3
ZNF554-201ENST00000317243 LINC01547P58512 204 aaPredicted RBP13.19□□□□□ -0.3
ZNF554-201ENST00000317243 LINC00269Q8N2A0 174 aa13.19□□□□□ -0.3
ZNF554-201ENST00000317243 Q6ZQT0 140 aa13.19□□□□□ -0.3
ZNF554-201ENST00000317243 F8WEM9 126 aa13.18□□□□□ -0.3
ZNF554-201ENST00000317243 RBM3P98179 157 aaKnown RBP13.18□□□□□ -0.3
ZNF554-201ENST00000317243 FP248Q71RG6 208 aaPredicted RBP13.18□□□□□ -0.3
ZNF554-201ENST00000317243 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
ZNF554-201ENST00000317243 OXLD1Q5BKU9 147 aa13.18□□□□□ -0.3
ZNF554-201ENST00000317243 KLKP1Q107X0 134 aa13.17□□□□□ -0.3
ZNF554-201ENST00000317243 LAMTOR3Q9UHA4 124 aa13.17□□□□□ -0.3
ZNF554-201ENST00000317243 IGHV4-30-4P0DP06 118 aa13.17□□□□□ -0.3
ZNF554-201ENST00000317243 Q8NAQ8 132 aa13.17□□□□□ -0.3
ZNF554-201ENST00000317243 DAD1P61803 113 aa13.16□□□□□ -0.3
ZNF554-201ENST00000317243 RETNQ9HD89 108 aa13.16□□□□□ -0.3
ZNF554-201ENST00000317243 A0A1B0GUV1 79 aa13.15□□□□□ -0.3
ZNF554-201ENST00000317243 Q6ZVQ6 151 aa13.15□□□□□ -0.3
ZNF554-201ENST00000317243 Q8NDZ9 215 aa13.15□□□□□ -0.3
ZNF554-201ENST00000317243 LINC00474Q9P2X8 69 aa13.14□□□□□ -0.31
ZNF554-201ENST00000317243 ANGP03950 147 aaKnown RBP13.14□□□□□ -0.31
ZNF554-201ENST00000317243 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
ZNF554-201ENST00000317243 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
ZNF554-201ENST00000317243 CHCHD10Q8WYQ3 142 aaPredicted RBP13.13□□□□□ -0.31
ZNF554-201ENST00000317243 SMIM26A0A096LP01 95 aa13.12□□□□□ -0.31
ZNF554-201ENST00000317243 LINC00575Q6W349 94 aa13.12□□□□□ -0.31
ZNF554-201ENST00000317243 COL6A5A8TX70 2615 aa13.12□□□□□ -0.31
ZNF554-201ENST00000317243 LYRM9A8MSI8 78 aa13.12□□□□□ -0.31
ZNF554-201ENST00000317243 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
ZNF554-201ENST00000317243 APOC4P55056 127 aa13.11□□□□□ -0.31
ZNF554-201ENST00000317243 BCE1O60756 84 aa13.1□□□□□ -0.31
ZNF554-201ENST00000317243 CD164L2Q6UWJ8 174 aa13.1□□□□□ -0.31
ZNF554-201ENST00000317243 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
ZNF554-201ENST00000317243 NBEAL1Q6ZS30 2694 aa13.1□□□□□ -0.31
ZNF554-201ENST00000317243 ZNF561-AS1K7EIQ3 104 aa13.09□□□□□ -0.31
ZNF554-201ENST00000317243 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
ZNF554-201ENST00000317243 REG3AQ06141 175 aa13.09□□□□□ -0.31
ZNF554-201ENST00000317243 LOC110117498A0A087WWA1 95 aa13.08□□□□□ -0.32
ZNF554-201ENST00000317243 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
ZNF554-201ENST00000317243 KRTAP10-11P60412 298 aa13.07□□□□□ -0.32
ZNF554-201ENST00000317243 COX17Q14061 63 aa13.07□□□□□ -0.32
ZNF554-201ENST00000317243 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
ZNF554-201ENST00000317243 UNQ6190/PRO20217Q6UXQ8 127 aa13.06□□□□□ -0.32
ZNF554-201ENST00000317243 Q6ZQY7 126 aa13.04□□□□□ -0.32
ZNF554-201ENST00000317243 SPART-AS1P0CW21 52 aa13.02□□□□□ -0.32
ZNF554-201ENST00000317243 MIFP14174 115 aa13.02□□□□□ -0.32
ZNF554-201ENST00000317243 BRK1Q8WUW1 75 aa13.02□□□□□ -0.32
ZNF554-201ENST00000317243 KLK12Q9UKR0 248 aa13.02□□□□□ -0.32
ZNF554-201ENST00000317243 CXCL6P80162 114 aa13.02□□□□□ -0.33
ZNF554-201ENST00000317243 TRBV7-4A0A0J9YYF1 115 aa13.01□□□□□ -0.33
ZNF554-201ENST00000317243 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
ZNF554-201ENST00000317243 A0A0U1RQV1 116 aa13□□□□□ -0.33
ZNF554-201ENST00000317243 KRTAP24-1Q3LI83 254 aa12.99□□□□□ -0.33
ZNF554-201ENST00000317243 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
ZNF554-201ENST00000317243 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
ZNF554-201ENST00000317243 NREPQ16612 68 aa12.97□□□□□ -0.33
ZNF554-201ENST00000317243 FAM229BQ4G0N7 80 aa12.97□□□□□ -0.33
ZNF554-201ENST00000317243 MPLKIPQ8TAP9 179 aa12.97□□□□□ -0.33
ZNF554-201ENST00000317243 NDUFC1O43677 76 aa12.97□□□□□ -0.33
ZNF554-201ENST00000317243 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms