RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 COX8CQ7Z4L0 72 aa14.41□□□□□ -0.1
KDM3B-201ENST00000314358 TM2D3Q9BRN9 247 aa14.41□□□□□ -0.1
KDM3B-201ENST00000314358 KIF25-AS1Q9Y6Z4 181 aa14.41□□□□□ -0.1
KDM3B-201ENST00000314358 Q96NJ1 140 aa14.4□□□□□ -0.1
KDM3B-201ENST00000314358 SSBP3-AS1Q7Z2R9 100 aa14.4□□□□□ -0.1
KDM3B-201ENST00000314358 LINC01561Q8N1V8 128 aa14.4□□□□□ -0.1
KDM3B-201ENST00000314358 NCOR2Q9Y618 2525 aa14.4□□□□□ -0.11
KDM3B-201ENST00000314358 IGHV3OR16-9A0A0B4J2B5 98 aa14.39□□□□□ -0.11
KDM3B-201ENST00000314358 IGLV5-39A0A0G2JS06 123 aa14.38□□□□□ -0.11
KDM3B-201ENST00000314358 TYMSOSQ8TAI1 123 aa14.38□□□□□ -0.11
KDM3B-201ENST00000314358 EPM2AB3EWF7 344 aa14.37□□□□□ -0.11
KDM3B-201ENST00000314358 TP53AIP1Q9HCN2 124 aa14.36□□□□□ -0.11
KDM3B-201ENST00000314358 IGF2RP11717 2491 aa14.34□□□□□ -0.11
KDM3B-201ENST00000314358 LINC00315P59091 139 aa14.34□□□□□ -0.11
KDM3B-201ENST00000314358 Q6ZQT0 140 aa14.34□□□□□ -0.11
KDM3B-201ENST00000314358 RTL8CO15255 209 aa14.33□□□□□ -0.11
KDM3B-201ENST00000314358 ELOF1P60002 83 aaKnown RBP14.33□□□□□ -0.12
KDM3B-201ENST00000314358 C8orf87E5RJ46 101 aa14.31□□□□□ -0.12
KDM3B-201ENST00000314358 FAM168BA1KXE4 195 aa14.3□□□□□ -0.12
KDM3B-201ENST00000314358 EP400Q96L91 3159 aa14.29□□□□□ -0.12
KDM3B-201ENST00000314358 TRAV22A0A0B4J277 110 aa14.28□□□□□ -0.12
KDM3B-201ENST00000314358 NHLRC4P0CG21 123 aaPredicted RBP14.28□□□□□ -0.12
KDM3B-201ENST00000314358 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
KDM3B-201ENST00000314358 Q6ZRX8 168 aa14.27□□□□□ -0.13
KDM3B-201ENST00000314358 PTPRBP23467 1997 aa14.26□□□□□ -0.13
KDM3B-201ENST00000314358 C16orf90A8MZG2 172 aa14.26□□□□□ -0.13
KDM3B-201ENST00000314358 FAM229AH3BQW9 127 aa14.26□□□□□ -0.13
KDM3B-201ENST00000314358 Q8NBF4 154 aa14.24□□□□□ -0.13
KDM3B-201ENST00000314358 LINC01600Q96MT4 127 aa14.22□□□□□ -0.13
KDM3B-201ENST00000314358 KRTAP24-1Q3LI83 254 aa14.22□□□□□ -0.13
KDM3B-201ENST00000314358 PIEZO1Q92508 2521 aa14.22□□□□□ -0.13
KDM3B-201ENST00000314358 TRBV7-4A0A0J9YYF1 115 aa14.2□□□□□ -0.14
KDM3B-201ENST00000314358 K7EQZ3 153 aa14.2□□□□□ -0.14
KDM3B-201ENST00000314358 LINC01546A6NGU7 62 aa14.2□□□□□ -0.14
KDM3B-201ENST00000314358 A8MUN3 132 aa14.2□□□□□ -0.14
KDM3B-201ENST00000314358 PRO0461Q9UI25 63 aa14.19□□□□□ -0.14
KDM3B-201ENST00000314358 FN1P02751 2386 aaKnown RBP14.19□□□□□ -0.14
KDM3B-201ENST00000314358 JMJD1CQ15652 2540 aa14.18□□□□□ -0.14
KDM3B-201ENST00000314358 Q6ZRP5 223 aa14.18□□□□□ -0.14
KDM3B-201ENST00000314358 WDR87Q6ZQQ6 2873 aa14.18□□□□□ -0.14
KDM3B-201ENST00000314358 LINC00588Q9Y4M8 146 aa14.18□□□□□ -0.14
KDM3B-201ENST00000314358 MYO9AB2RTY4 2548 aa14.17□□□□□ -0.14
KDM3B-201ENST00000314358 FAM19A4Q96LR4 140 aa14.17□□□□□ -0.14
KDM3B-201ENST00000314358 C9orf92A6NGG3 77 aa14.15□□□□□ -0.14
KDM3B-201ENST00000314358 COA5Q86WW8 74 aa14.15□□□□□ -0.14
KDM3B-201ENST00000314358 LRRK2Q5S007 2527 aa14.15□□□□□ -0.14
KDM3B-201ENST00000314358 DSCR10P59022 87 aa14.14□□□□□ -0.15
KDM3B-201ENST00000314358 LOC110117498A0A087WWA1 95 aa14.14□□□□□ -0.15
KDM3B-201ENST00000314358 NBDYA0A0U1RRE5 68 aa14.14□□□□□ -0.15
KDM3B-201ENST00000314358 A0A0G2JQZ4 141 aa14.13□□□□□ -0.15
KDM3B-201ENST00000314358 A0A1W2PNN7 141 aa14.13□□□□□ -0.15
KDM3B-201ENST00000314358 IGLV6-57P01721 117 aa14.12□□□□□ -0.15
KDM3B-201ENST00000314358 COX6B2Q6YFQ2 88 aa14.12□□□□□ -0.15
KDM3B-201ENST00000314358 TLN1Q9Y490 2541 aaKnown RBP14.11□□□□□ -0.15
KDM3B-201ENST00000314358 COL4A2P08572 1712 aa14.11□□□□□ -0.15
KDM3B-201ENST00000314358 IGLV5-45A0A087WSX0 123 aa14.11□□□□□ -0.15
KDM3B-201ENST00000314358 COL27A1Q8IZC6 1860 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-201ENST00000314358 J3QL48 77 aa14.1□□□□□ -0.15
KDM3B-201ENST00000314358 BCE1O60756 84 aa14.1□□□□□ -0.15
KDM3B-201ENST00000314358 H3BPC8 53 aa14.06□□□□□ -0.16
KDM3B-201ENST00000314358 A8MWP4 228 aa14.06□□□□□ -0.16
KDM3B-201ENST00000314358 MRPL34Q9BQ48 92 aaKnown RBP14.05□□□□□ -0.16
KDM3B-201ENST00000314358 ZFYVE26Q68DK2 2539 aa14.04□□□□□ -0.16
KDM3B-201ENST00000314358 DNAH10OSP0CZ25 163 aa14.04□□□□□ -0.16
KDM3B-201ENST00000314358 RPS28P62857 69 aaKnown RBP14.03□□□□□ -0.16
KDM3B-201ENST00000314358 TLN2Q9Y4G6 2542 aa14.03□□□□□ -0.16
KDM3B-201ENST00000314358 ABCA12Q86UK0 2595 aa14.03□□□□□ -0.16
KDM3B-201ENST00000314358 OBSCN-AS1Q96MR7 158 aa14.03□□□□□ -0.16
KDM3B-201ENST00000314358 Q8NAQ8 132 aa14.02□□□□□ -0.17
KDM3B-201ENST00000314358 LINC01554Q52M75 96 aa14.02□□□□□ -0.17
KDM3B-201ENST00000314358 LOC101927531A0A1B0GV80 90 aa14.01□□□□□ -0.17
KDM3B-201ENST00000314358 VPREB1P12018 145 aa14.01□□□□□ -0.17
KDM3B-201ENST00000314358 CRIPTQ9P021 101 aa14.01□□□□□ -0.17
KDM3B-201ENST00000314358 ANAPC11Q9NYG5 84 aa14□□□□□ -0.17
KDM3B-201ENST00000314358 C9orf129Q5T035 196 aaKnown RBP13.99□□□□□ -0.17
KDM3B-201ENST00000314358 GVQW2A0A096LPI5 108 aaPredicted RBP13.98□□□□□ -0.17
KDM3B-201ENST00000314358 A0A0D9SG42 100 aa13.98□□□□□ -0.17
KDM3B-201ENST00000314358 UQCR11O14957 56 aa13.97□□□□□ -0.17
KDM3B-201ENST00000314358 MIR22HGQ0VDD5 57 aa13.97□□□□□ -0.17
KDM3B-201ENST00000314358 SMR3BP02814 79 aaPredicted RBP13.95□□□□□ -0.18
KDM3B-201ENST00000314358 H3BNG1 76 aa13.95□□□□□ -0.18
KDM3B-201ENST00000314358 LITAFQ99732 161 aa13.95□□□□□ -0.18
KDM3B-201ENST00000314358 IGFL1Q6UW32 110 aa13.94□□□□□ -0.18
KDM3B-201ENST00000314358 A0A1B0GW54 56 aa13.94□□□□□ -0.18
KDM3B-201ENST00000314358 IGLV1-50A0A075B6I6 118 aa13.9□□□□□ -0.18
KDM3B-201ENST00000314358 EIF4EBP3O60516 100 aaPredicted RBP13.9□□□□□ -0.18
KDM3B-201ENST00000314358 SETD2Q9BYW2 2564 aaPredicted RBP13.9□□□□□ -0.18
KDM3B-201ENST00000314358 F8P00451 2351 aa13.88□□□□□ -0.19
KDM3B-201ENST00000314358 C8orf17Q9NRJ1 99 aa13.88□□□□□ -0.19
KDM3B-201ENST00000314358 ZNF462Q96JM2 2506 aa13.85□□□□□ -0.19
KDM3B-201ENST00000314358 WWC2-AS2Q96NR7 200 aa13.84□□□□□ -0.19
KDM3B-201ENST00000314358 LINC00304Q8N9R0 145 aa13.83□□□□□ -0.2
KDM3B-201ENST00000314358 C15orf56Q8N910 161 aa13.83□□□□□ -0.2
KDM3B-201ENST00000314358 KRTAP10-11P60412 298 aa13.81□□□□□ -0.2
KDM3B-201ENST00000314358 IGLV5-37A0A075B6J1 123 aa13.81□□□□□ -0.2
KDM3B-201ENST00000314358 PRR15Q8IV56 129 aa13.81□□□□□ -0.2
KDM3B-201ENST00000314358 Q8N1X5 172 aa13.81□□□□□ -0.2
KDM3B-201ENST00000314358 CENPFP49454 3210 aa13.79□□□□□ -0.2
KDM3B-201ENST00000314358 CYP4F30PQ9H0H9 118 aa13.79□□□□□ -0.2
KDM3B-201ENST00000314358 A0A1B0GVX0 72 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms