RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SPINT4Q6UDR6 99 aa9.49□□□□□ -0.89
CLCN6-201ENST00000312413 ABCA12Q86UK0 2595 aa9.49□□□□□ -0.89
CLCN6-201ENST00000312413 TLN2Q9Y4G6 2542 aa9.49□□□□□ -0.89
CLCN6-201ENST00000312413 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
CLCN6-201ENST00000312413 ELOF1P60002 83 aaKnown RBP9.48□□□□□ -0.89
CLCN6-201ENST00000312413 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
CLCN6-201ENST00000312413 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
CLCN6-201ENST00000312413 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
CLCN6-201ENST00000312413 USP9XQ93008 2570 aaPredicted RBP9.47□□□□□ -0.89
CLCN6-201ENST00000312413 Q8NBF4 154 aa9.47□□□□□ -0.89
CLCN6-201ENST00000312413 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.89
CLCN6-201ENST00000312413 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.9
CLCN6-201ENST00000312413 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
CLCN6-201ENST00000312413 LRP4O75096 1905 aa9.45□□□□□ -0.9
CLCN6-201ENST00000312413 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
CLCN6-201ENST00000312413 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
CLCN6-201ENST00000312413 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
CLCN6-201ENST00000312413 SETD2Q9BYW2 2564 aaPredicted RBP9.44□□□□□ -0.9
CLCN6-201ENST00000312413 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
CLCN6-201ENST00000312413 PKD1L2Q7Z442 2459 aa9.43□□□□□ -0.9
CLCN6-201ENST00000312413 ZFYVE26Q68DK2 2539 aa9.42□□□□□ -0.9
CLCN6-201ENST00000312413 FSHBP01225 129 aa9.42□□□□□ -0.9
CLCN6-201ENST00000312413 MOBPQ13875 183 aa9.42□□□□□ -0.9
CLCN6-201ENST00000312413 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
CLCN6-201ENST00000312413 COL5A1P20908 1838 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-201ENST00000312413 Q6ZRX8 168 aa9.4□□□□□ -0.9
CLCN6-201ENST00000312413 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
CLCN6-201ENST00000312413 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.9
CLCN6-201ENST00000312413 ADAMTS20P59510 1910 aa9.4□□□□□ -0.9
CLCN6-201ENST00000312413 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
CLCN6-201ENST00000312413 FHL3Q13643 280 aa9.37□□□□□ -0.91
CLCN6-201ENST00000312413 LITAFQ99732 161 aa9.36□□□□□ -0.91
CLCN6-201ENST00000312413 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
CLCN6-201ENST00000312413 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-201ENST00000312413 SSBP3-AS1Q7Z2R9 100 aa9.34□□□□□ -0.91
CLCN6-201ENST00000312413 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-201ENST00000312413 F8P00451 2351 aa9.34□□□□□ -0.91
CLCN6-201ENST00000312413 A8MUN3 132 aa9.33□□□□□ -0.92
CLCN6-201ENST00000312413 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
CLCN6-201ENST00000312413 LRRK2Q5S007 2527 aa9.33□□□□□ -0.92
CLCN6-201ENST00000312413 TRBV7-4A0A0J9YYF1 115 aa9.33□□□□□ -0.92
CLCN6-201ENST00000312413 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
CLCN6-201ENST00000312413 RPL37AP61513 92 aaKnown RBP9.33□□□□□ -0.92
CLCN6-201ENST00000312413 H3BNG1 76 aa9.32□□□□□ -0.92
CLCN6-201ENST00000312413 LINC00313P59037 77 aa9.31□□□□□ -0.92
CLCN6-201ENST00000312413 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
CLCN6-201ENST00000312413 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
CLCN6-201ENST00000312413 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-201ENST00000312413 WDR87Q6ZQQ6 2873 aa9.3□□□□□ -0.92
CLCN6-201ENST00000312413 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
CLCN6-201ENST00000312413 COA5Q86WW8 74 aa9.28□□□□□ -0.92
CLCN6-201ENST00000312413 GVQW2A0A096LPI5 108 aaPredicted RBP9.28□□□□□ -0.92
CLCN6-201ENST00000312413 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
CLCN6-201ENST00000312413 K7EQZ3 153 aa9.27□□□□□ -0.92
CLCN6-201ENST00000312413 A8MWP4 228 aa9.27□□□□□ -0.93
CLCN6-201ENST00000312413 MDFIQ99750 246 aa9.27□□□□□ -0.93
CLCN6-201ENST00000312413 LINC01600Q96MT4 127 aa9.26□□□□□ -0.93
CLCN6-201ENST00000312413 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
CLCN6-201ENST00000312413 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
CLCN6-201ENST00000312413 UQCR11O14957 56 aa9.24□□□□□ -0.93
CLCN6-201ENST00000312413 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
CLCN6-201ENST00000312413 Q6ZRP5 223 aa9.23□□□□□ -0.93
CLCN6-201ENST00000312413 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
CLCN6-201ENST00000312413 LINC00336Q6ZUF6 198 aa9.21□□□□□ -0.94
CLCN6-201ENST00000312413 PTPRBP23467 1997 aa9.19□□□□□ -0.94
CLCN6-201ENST00000312413 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
CLCN6-201ENST00000312413 CD164Q04900 197 aa9.18□□□□□ -0.94
CLCN6-201ENST00000312413 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
CLCN6-201ENST00000312413 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
CLCN6-201ENST00000312413 Q8NAQ8 132 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 Q96NJ1 140 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 H7BZZ5 65 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 KLK9Q2XQG4 91 aa9.17□□□□□ -0.94
CLCN6-201ENST00000312413 MTORP42345 2549 aa9.16□□□□□ -0.94
CLCN6-201ENST00000312413 RTL8CO15255 209 aa9.16□□□□□ -0.94
CLCN6-201ENST00000312413 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
CLCN6-201ENST00000312413 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
CLCN6-201ENST00000312413 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
CLCN6-201ENST00000312413 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
CLCN6-201ENST00000312413 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
CLCN6-201ENST00000312413 ANKRD11Q6UB99 2663 aaPredicted RBP9.14□□□□□ -0.95
CLCN6-201ENST00000312413 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
CLCN6-201ENST00000312413 PRR15Q8IV56 129 aa9.14□□□□□ -0.95
CLCN6-201ENST00000312413 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
CLCN6-201ENST00000312413 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
CLCN6-201ENST00000312413 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
CLCN6-201ENST00000312413 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
CLCN6-201ENST00000312413 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
CLCN6-201ENST00000312413 EP400Q96L91 3159 aa9.11□□□□□ -0.95
CLCN6-201ENST00000312413 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
CLCN6-201ENST00000312413 LCA10Q71F78 164 aa9.08□□□□□ -0.96
CLCN6-201ENST00000312413 Q8N377 158 aa9.07□□□□□ -0.96
CLCN6-201ENST00000312413 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
CLCN6-201ENST00000312413 COL27A1Q8IZC6 1860 aaPredicted RBP9.04□□□□□ -0.96
CLCN6-201ENST00000312413 DSCR10P59022 87 aa9.03□□□□□ -0.96
CLCN6-201ENST00000312413 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
CLCN6-201ENST00000312413 ACANP16112 2415 aa9.02□□□□□ -0.97
CLCN6-201ENST00000312413 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms