RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SND1-IT1Q9HBX3 110 aa12.29□□□□□ -0.44
VEGFB-201ENST00000309422 J3QQQ9 107 aa12.28□□□□□ -0.44
VEGFB-201ENST00000309422 HNRNPA3P51991 378 aaKnown RBP12.28□□□□□ -0.44
VEGFB-201ENST00000309422 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
VEGFB-201ENST00000309422 A0A0U1RRA0 63 aa12.27□□□□□ -0.45
VEGFB-201ENST00000309422 KRTAP29-1A8MX34 341 aaPredicted RBP12.27□□□□□ -0.45
VEGFB-201ENST00000309422 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
VEGFB-201ENST00000309422 MYCBP2O75592 4640 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 SMIM13P0DJ93 91 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 KRTAP7-1Q8IUC3 87 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 MIEN1Q9BRT3 115 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
VEGFB-201ENST00000309422 IGLV5-37A0A075B6J1 123 aa12.23□□□□□ -0.45
VEGFB-201ENST00000309422 E9PLD3 99 aa12.23□□□□□ -0.45
VEGFB-201ENST00000309422 IGLV7-43P04211 117 aa12.23□□□□□ -0.45
VEGFB-201ENST00000309422 FLG2Q5D862 2391 aaPredicted RBP12.23□□□□□ -0.45
VEGFB-201ENST00000309422 GAGE10A6NGK3 116 aa12.22□□□□□ -0.45
VEGFB-201ENST00000309422 DIRC1Q969H9 104 aa12.22□□□□□ -0.45
VEGFB-201ENST00000309422 TSPEAR-AS2P59090 65 aa12.21□□□□□ -0.45
VEGFB-201ENST00000309422 MIR7-3HGQ8N6C7 128 aa12.21□□□□□ -0.45
VEGFB-201ENST00000309422 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
VEGFB-201ENST00000309422 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
VEGFB-201ENST00000309422 BOD1L2Q8IYS8 172 aa12.18□□□□□ -0.46
VEGFB-201ENST00000309422 VPREB1P12018 145 aa12.18□□□□□ -0.46
VEGFB-201ENST00000309422 S100A12P80511 92 aa12.18□□□□□ -0.46
VEGFB-201ENST00000309422 IGKV2-28A0A075B6P5 120 aa12.16□□□□□ -0.46
VEGFB-201ENST00000309422 BCE1O60756 84 aa12.16□□□□□ -0.46
VEGFB-201ENST00000309422 IGKV2D-28P01615 120 aa12.16□□□□□ -0.46
VEGFB-201ENST00000309422 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
VEGFB-201ENST00000309422 SRSF9Q13242 221 aaKnown RBP eCLIP12.16□□□□□ -0.46
VEGFB-201ENST00000309422 DMBT1Q9UGM3 2413 aaPredicted RBP12.15□□□□□ -0.46
VEGFB-201ENST00000309422 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
VEGFB-201ENST00000309422 UBE2AP49459 152 aa12.14□□□□□ -0.47
VEGFB-201ENST00000309422 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
VEGFB-201ENST00000309422 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
VEGFB-201ENST00000309422 M0R378 163 aa12.13□□□□□ -0.47
VEGFB-201ENST00000309422 IGKV2D-26A0A0A0MRZ7 120 aa12.12□□□□□ -0.47
VEGFB-201ENST00000309422 HSBP1L1C9JCN9 74 aa12.12□□□□□ -0.47
VEGFB-201ENST00000309422 H0Y9J4 135 aa12.12□□□□□ -0.47
VEGFB-201ENST00000309422 ZNF861PO60384 105 aa12.12□□□□□ -0.47
VEGFB-201ENST00000309422 HIST1H2BLQ99880 126 aa12.12□□□□□ -0.47
VEGFB-201ENST00000309422 FAT3Q8TDW7 4589 aa12.11□□□□□ -0.47
VEGFB-201ENST00000309422 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
VEGFB-201ENST00000309422 SNRPEP62304 92 aaKnown RBP12.11□□□□□ -0.47
VEGFB-201ENST00000309422 DAND5Q8N907 189 aa12.11□□□□□ -0.47
VEGFB-201ENST00000309422 NCR3O14931 201 aa12.1□□□□□ -0.47
VEGFB-201ENST00000309422 IGLV1-50A0A075B6I6 118 aa12.09□□□□□ -0.47
VEGFB-201ENST00000309422 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
VEGFB-201ENST00000309422 LINC01600Q96MT4 127 aa12.09□□□□□ -0.47
VEGFB-201ENST00000309422 ATOH7Q8N100 152 aa12.08□□□□□ -0.48
VEGFB-201ENST00000309422 TIMM17BO60830 172 aa12.06□□□□□ -0.48
VEGFB-201ENST00000309422 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
VEGFB-201ENST00000309422 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
VEGFB-201ENST00000309422 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
VEGFB-201ENST00000309422 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
VEGFB-201ENST00000309422 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
VEGFB-201ENST00000309422 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
VEGFB-201ENST00000309422 PRYO14603 147 aa12.05□□□□□ -0.48
VEGFB-201ENST00000309422 NPC2P61916 151 aa12.05□□□□□ -0.48
VEGFB-201ENST00000309422 S100A7L2Q5SY68 101 aa12.05□□□□□ -0.48
VEGFB-201ENST00000309422 TRBV10-2A0A0K0K1G8 114 aa12.04□□□□□ -0.48
VEGFB-201ENST00000309422 Q8NDZ9 215 aa12.04□□□□□ -0.48
VEGFB-201ENST00000309422 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
VEGFB-201ENST00000309422 LOC107984156A0A0G2JMH3 177 aa12.03□□□□□ -0.48
VEGFB-201ENST00000309422 NDUFC2O95298 119 aa12.03□□□□□ -0.48
VEGFB-201ENST00000309422 ARL17AQ8IVW1 177 aa12.03□□□□□ -0.48
VEGFB-201ENST00000309422 SCGB1D1O95968 90 aa12.02□□□□□ -0.49
VEGFB-201ENST00000309422 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
VEGFB-201ENST00000309422 ETDCA0A1B0GVM5 59 aa12□□□□□ -0.49
VEGFB-201ENST00000309422 DDTP30046 118 aa12□□□□□ -0.49
VEGFB-201ENST00000309422 RPL13AP40429 203 aaKnown RBP12□□□□□ -0.49
VEGFB-201ENST00000309422 C5orf52A6NGY3 159 aa11.99□□□□□ -0.49
VEGFB-201ENST00000309422 PRLHP81277 87 aa11.99□□□□□ -0.49
VEGFB-201ENST00000309422 SPANXCQ9NY87 97 aa11.99□□□□□ -0.49
VEGFB-201ENST00000309422 TRBV10-3A0A0K0K1G6 114 aa11.98□□□□□ -0.49
VEGFB-201ENST00000309422 ADAMTSL4-AS1Q5T5F5 129 aa11.98□□□□□ -0.49
VEGFB-201ENST00000309422 TTTY13Q9BZ97 58 aa11.98□□□□□ -0.49
VEGFB-201ENST00000309422 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
VEGFB-201ENST00000309422 HERC1Q15751 4861 aa11.97□□□□□ -0.49
VEGFB-201ENST00000309422 MT1HL1P0DM35 61 aa11.96□□□□□ -0.49
VEGFB-201ENST00000309422 HIGD2AQ9BW72 106 aa11.96□□□□□ -0.49
VEGFB-201ENST00000309422 KCNQ1DNQ9H478 68 aa11.96□□□□□ -0.49
VEGFB-201ENST00000309422 Q6ZVH6 145 aa11.95□□□□□ -0.5
VEGFB-201ENST00000309422 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
VEGFB-201ENST00000309422 LITAFQ99732 161 aa11.94□□□□□ -0.5
VEGFB-201ENST00000309422 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
VEGFB-201ENST00000309422 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
VEGFB-201ENST00000309422 SOSTDC1Q6X4U4 206 aa11.93□□□□□ -0.5
VEGFB-201ENST00000309422 KRTAP13-1Q8IUC0 172 aa11.93□□□□□ -0.5
VEGFB-201ENST00000309422 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
VEGFB-201ENST00000309422 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
VEGFB-201ENST00000309422 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
VEGFB-201ENST00000309422 ZNF706Q9Y5V0 76 aaPredicted RBP11.93□□□□□ -0.5
VEGFB-201ENST00000309422 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
VEGFB-201ENST00000309422 IFITM1P13164 125 aa11.92□□□□□ -0.5
VEGFB-201ENST00000309422 PRR26Q8N8Z3 221 aa11.92□□□□□ -0.5
VEGFB-201ENST00000309422 CRYGAP11844 174 aa11.91□□□□□ -0.5
VEGFB-201ENST00000309422 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.5
VEGFB-201ENST00000309422 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms