RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TRBV10-2A0A0K0K1G8 114 aa4.37□□□□□ -1.71
USP47-201ENST00000305481 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
USP47-201ENST00000305481 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
USP47-201ENST00000305481 FAM218AQ96MZ4 157 aa4.37□□□□□ -1.71
USP47-201ENST00000305481 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
USP47-201ENST00000305481 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
USP47-201ENST00000305481 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
USP47-201ENST00000305481 C6orf48Q9UBA6 75 aa4.36□□□□□ -1.71
USP47-201ENST00000305481 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
USP47-201ENST00000305481 GVQW2A0A096LPI5 108 aaPredicted RBP4.35□□□□□ -1.71
USP47-201ENST00000305481 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
USP47-201ENST00000305481 C15orf53Q8NAA6 179 aa4.35□□□□□ -1.71
USP47-201ENST00000305481 PPDPFLQ8WWR9 84 aa4.35□□□□□ -1.71
USP47-201ENST00000305481 NDUFV3P56181 108 aaKnown RBP4.35□□□□□ -1.71
USP47-201ENST00000305481 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
USP47-201ENST00000305481 NDUFC2O95298 119 aa4.34□□□□□ -1.71
USP47-201ENST00000305481 TEX49A0A1B0GTD5 131 aa4.34□□□□□ -1.71
USP47-201ENST00000305481 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
USP47-201ENST00000305481 J3QR89 54 aa4.34□□□□□ -1.72
USP47-201ENST00000305481 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.72
USP47-201ENST00000305481 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
USP47-201ENST00000305481 IGKV2D-24A0A075B6R9 120 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 A0A087WYN8 130 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 H3BT86 120 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 TRACP01848 142 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 HRCT1Q6UXD1 115 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 PRKDCP78527 4128 aaKnown RBP4.33□□□□□ -1.72
USP47-201ENST00000305481 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 Q6ZRU5 148 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 Q9HAA7 133 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 DNHD1Q96M86 4753 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 NCR3O14931 201 aa4.33□□□□□ -1.72
USP47-201ENST00000305481 MUC7Q8TAX7 377 aa4.32□□□□□ -1.72
USP47-201ENST00000305481 CAMK2N2Q96S95 79 aa4.32□□□□□ -1.72
USP47-201ENST00000305481 DNAH7Q8WXX0 4024 aa4.32□□□□□ -1.72
USP47-201ENST00000305481 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
USP47-201ENST00000305481 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
USP47-201ENST00000305481 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 H0YGX0 51 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 C2orf48Q96LS8 159 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 B9D2Q9BPU9 175 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 UPK3BQ9BT76 320 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
USP47-201ENST00000305481 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 SLPIP03973 132 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 OXTP01178 125 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 IGLV6-57P01721 117 aa4.3□□□□□ -1.72
USP47-201ENST00000305481 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
USP47-201ENST00000305481 LECT2O14960 151 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 Q6ZRP5 223 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
USP47-201ENST00000305481 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 APLNQ9ULZ1 77 aa4.29□□□□□ -1.72
USP47-201ENST00000305481 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 VPREB1P12018 145 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 SYCNQ0VAF6 134 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 S100A7L2Q5SY68 101 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 C9orf129Q5T035 196 aaKnown RBP4.28□□□□□ -1.72
USP47-201ENST00000305481 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
USP47-201ENST00000305481 TTC32Q5I0X7 151 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 Q8N814 137 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 LINC00167Q96N53 147 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 DNAL4O96015 105 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 Q5XG85 94 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 GAGE2BQ13066 116 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 STARD9Q9P2P6 4700 aa4.27□□□□□ -1.73
USP47-201ENST00000305481 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
USP47-201ENST00000305481 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
USP47-201ENST00000305481 TRAV23DV6A0A075B6W5 121 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 A0A1B0GX51 115 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 KRTAP21-3Q3LHN1 58 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 RMI2Q96E14 147 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 OBSCN-AS1Q96MR7 158 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
USP47-201ENST00000305481 M0R378 163 aa4.24□□□□□ -1.73
USP47-201ENST00000305481 ORMDL1Q9P0S3 153 aa4.24□□□□□ -1.73
USP47-201ENST00000305481 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
USP47-201ENST00000305481 J3KT08 172 aa4.24□□□□□ -1.73
USP47-201ENST00000305481 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
USP47-201ENST00000305481 KRTAP7-1Q8IUC3 87 aa4.24□□□□□ -1.73
USP47-201ENST00000305481 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 UBE2DNLQ8IWF7 75 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 hADV29S1A0JD25 119 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 FAM168BA1KXE4 195 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 DIRC1Q969H9 104 aa4.23□□□□□ -1.73
USP47-201ENST00000305481 C14orf132Q9NPU4 83 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms