RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 EIF4EBP3O60516 100 aaPredicted RBP17.16■□□□□ 0.34
HDAC3-201ENST00000305264 KRTAP7-1Q8IUC3 87 aa17.16■□□□□ 0.34
HDAC3-201ENST00000305264 CIRBP-AS1Q8TBR5 109 aa17.15■□□□□ 0.34
HDAC3-201ENST00000305264 SERTAD4-AS1Q5TG53 156 aa17.15■□□□□ 0.34
HDAC3-201ENST00000305264 SOSTDC1Q6X4U4 206 aa17.15■□□□□ 0.34
HDAC3-201ENST00000305264 FAM19A5Q7Z5A7 132 aaPredicted RBP17.15■□□□□ 0.34
HDAC3-201ENST00000305264 C2orf91Q6ZV80 131 aa17.14■□□□□ 0.33
HDAC3-201ENST00000305264 Q8NDZ9 215 aa17.14■□□□□ 0.33
HDAC3-201ENST00000305264 SPANXDQ9BXN6 97 aa17.14■□□□□ 0.33
HDAC3-201ENST00000305264 SPANXCQ9NY87 97 aa17.14■□□□□ 0.33
HDAC3-201ENST00000305264 PRO1933Q9H354 126 aa17.13■□□□□ 0.33
HDAC3-201ENST00000305264 XGP55808 180 aa17.13■□□□□ 0.33
HDAC3-201ENST00000305264 LINC00518Q8N0U6 118 aa17.13■□□□□ 0.33
HDAC3-201ENST00000305264 PLAC8Q9NZF1 115 aa17.13■□□□□ 0.33
HDAC3-201ENST00000305264 LINC00308Q8TCZ7 52 aa17.12■□□□□ 0.33
HDAC3-201ENST00000305264 MIEN1Q9BRT3 115 aa17.11■□□□□ 0.33
HDAC3-201ENST00000305264 SPANXB1Q9NS25 103 aaPredicted RBP17.11■□□□□ 0.33
HDAC3-201ENST00000305264 LOC107984156A0A0G2JMH3 177 aa17.1■□□□□ 0.33
HDAC3-201ENST00000305264 ARL17AQ8IVW1 177 aa17.1■□□□□ 0.33
HDAC3-201ENST00000305264 UQCR10Q9UDW1 63 aa17.1■□□□□ 0.33
HDAC3-201ENST00000305264 HIGD1BQ9P298 99 aa17.09■□□□□ 0.33
HDAC3-201ENST00000305264 PLA2G2DQ9UNK4 145 aa17.08■□□□□ 0.33
HDAC3-201ENST00000305264 EPM2AB3EWF7 344 aa17.08■□□□□ 0.32
HDAC3-201ENST00000305264 VPREB1P12018 145 aa17.08■□□□□ 0.32
HDAC3-201ENST00000305264 SRSF9Q13242 221 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC3-201ENST00000305264 BIRC6Q9NR09 4857 aa17.07■□□□□ 0.32
HDAC3-201ENST00000305264 Q6ZVH6 145 aa17.07■□□□□ 0.32
HDAC3-201ENST00000305264 KIAA1109Q2LD37 5005 aa17.07■□□□□ 0.32
HDAC3-201ENST00000305264 M0QXV9 152 aa17.05■□□□□ 0.32
HDAC3-201ENST00000305264 RYR1P21817 5038 aa17.05■□□□□ 0.32
HDAC3-201ENST00000305264 CDK2AP2O75956 126 aa17.04■□□□□ 0.32
HDAC3-201ENST00000305264 MUSTN1Q8IVN3 82 aa17.04■□□□□ 0.32
HDAC3-201ENST00000305264 HIST1H4GQ99525 98 aa17.04■□□□□ 0.32
HDAC3-201ENST00000305264 IFITM1P13164 125 aa17.03■□□□□ 0.32
HDAC3-201ENST00000305264 PRR3P79522 188 aaKnown RBP17.03■□□□□ 0.32
HDAC3-201ENST00000305264 C22orf24Q9Y442 160 aa17.03■□□□□ 0.32
HDAC3-201ENST00000305264 HSPG2P98160 4391 aa17.03■□□□□ 0.32
HDAC3-201ENST00000305264 IGLV5-37A0A075B6J1 123 aa17.02■□□□□ 0.32
HDAC3-201ENST00000305264 RPL24P83731 157 aaKnown RBP17.02■□□□□ 0.32
HDAC3-201ENST00000305264 PHF5AQ7RTV0 110 aaKnown RBP17.02■□□□□ 0.32
HDAC3-201ENST00000305264 NKAPP1Q8N9T2 125 aa17.01■□□□□ 0.31
HDAC3-201ENST00000305264 NCR3O14931 201 aa17■□□□□ 0.31
HDAC3-201ENST00000305264 COPS9Q8WXC6 57 aa16.98■□□□□ 0.31
HDAC3-201ENST00000305264 MRPL55Q7Z7F7 128 aaKnown RBP16.98■□□□□ 0.31
HDAC3-201ENST00000305264 NDUFC2O95298 119 aa16.97■□□□□ 0.31
HDAC3-201ENST00000305264 HNRNPA3P51991 378 aaKnown RBP16.97■□□□□ 0.31
HDAC3-201ENST00000305264 PPDPFQ9H3Y8 114 aa16.97■□□□□ 0.31
HDAC3-201ENST00000305264 GAGE10A6NGK3 116 aa16.97■□□□□ 0.31
HDAC3-201ENST00000305264 TSTD3H0UI37 97 aa16.97■□□□□ 0.31
HDAC3-201ENST00000305264 C7orf33Q8WU49 177 aa16.96■□□□□ 0.31
HDAC3-201ENST00000305264 SMR3BP02814 79 aaPredicted RBP16.94■□□□□ 0.3
HDAC3-201ENST00000305264 LINC00167Q96N53 147 aa16.94■□□□□ 0.3
HDAC3-201ENST00000305264 IGKV2-28A0A075B6P5 120 aa16.93■□□□□ 0.3
HDAC3-201ENST00000305264 IGKV2D-28P01615 120 aa16.93■□□□□ 0.3
HDAC3-201ENST00000305264 KRTAP11-1Q8IUC1 163 aa16.93■□□□□ 0.3
HDAC3-201ENST00000305264 FAT1Q14517 4588 aa16.92■□□□□ 0.3
HDAC3-201ENST00000305264 M0R378 163 aa16.92■□□□□ 0.3
HDAC3-201ENST00000305264 TAL2Q16559 108 aa16.92■□□□□ 0.3
HDAC3-201ENST00000305264 A4D1N5 150 aa16.91■□□□□ 0.3
HDAC3-201ENST00000305264 RPL37AP8A6NKH3 93 aa16.91■□□□□ 0.3
HDAC3-201ENST00000305264 LBHQ53QV2 105 aaPredicted RBP16.91■□□□□ 0.3
HDAC3-201ENST00000305264 HSD52Q0P140 79 aa16.9■□□□□ 0.3
HDAC3-201ENST00000305264 TRBV10-2A0A0K0K1G8 114 aa16.89■□□□□ 0.3
HDAC3-201ENST00000305264 UBE2BP63146 152 aa16.89■□□□□ 0.3
HDAC3-201ENST00000305264 CEND1Q8N111 149 aa16.89■□□□□ 0.3
HDAC3-201ENST00000305264 LINC00528Q8N1L1 170 aa16.87■□□□□ 0.29
HDAC3-201ENST00000305264 LINC00337Q8N6G1 96 aa16.87■□□□□ 0.29
HDAC3-201ENST00000305264 VPS13BQ7Z7G8 4022 aa16.86■□□□□ 0.29
HDAC3-201ENST00000305264 TRBV10-3A0A0K0K1G6 114 aa16.85■□□□□ 0.29
HDAC3-201ENST00000305264 FXYD2P54710 66 aa16.85■□□□□ 0.29
HDAC3-201ENST00000305264 IGLV1-50A0A075B6I6 118 aa16.84■□□□□ 0.29
HDAC3-201ENST00000305264 CTAG1AP78358 180 aa16.84■□□□□ 0.29
HDAC3-201ENST00000305264 DDTP30046 118 aa16.82■□□□□ 0.28
HDAC3-201ENST00000305264 S100A7L2Q5SY68 101 aa16.82■□□□□ 0.28
HDAC3-201ENST00000305264 KRTAP17-1Q9BYP8 105 aa16.82■□□□□ 0.28
HDAC3-201ENST00000305264 IGLV6-57P01721 117 aa16.81■□□□□ 0.28
HDAC3-201ENST00000305264 PSORS1C2Q9UIG4 136 aa16.81■□□□□ 0.28
HDAC3-201ENST00000305264 OR13C6PQ8NH95 151 aa16.8■□□□□ 0.28
HDAC3-201ENST00000305264 A6NDN8 102 aa16.77■□□□□ 0.27
HDAC3-201ENST00000305264 CFC1BP0CG36 223 aa16.77■□□□□ 0.27
HDAC3-201ENST00000305264 CFC1P0CG37 223 aa16.77■□□□□ 0.27
HDAC3-201ENST00000305264 TMEM238LA0A1B0GVL6 79 aa16.76■□□□□ 0.27
HDAC3-201ENST00000305264 A6NJY4 79 aa16.76■□□□□ 0.27
HDAC3-201ENST00000305264 TMEM126AQ9H061 195 aa16.75■□□□□ 0.27
HDAC3-201ENST00000305264 TRAV13-2A0A0B4J235 113 aa16.75■□□□□ 0.27
HDAC3-201ENST00000305264 RPL37AP61513 92 aaKnown RBP16.75■□□□□ 0.27
HDAC3-201ENST00000305264 KCNQ1DNQ9H478 68 aa16.75■□□□□ 0.27
HDAC3-201ENST00000305264 HINT1P49773 126 aaPredicted RBP16.74■□□□□ 0.27
HDAC3-201ENST00000305264 BVES-AS1Q5T3Y7 98 aa16.74■□□□□ 0.27
HDAC3-201ENST00000305264 C1orf137Q5JT78 98 aa16.73■□□□□ 0.27
HDAC3-201ENST00000305264 PRYO14603 147 aa16.72■□□□□ 0.27
HDAC3-201ENST00000305264 Q5VSD8 79 aa16.72■□□□□ 0.27
HDAC3-201ENST00000305264 REG3GQ6UW15 175 aa16.72■□□□□ 0.27
HDAC3-201ENST00000305264 NHP2Q9NX24 153 aaKnown RBP16.72■□□□□ 0.27
HDAC3-201ENST00000305264 TRAV23DV6A0A075B6W5 121 aa16.71■□□□□ 0.27
HDAC3-201ENST00000305264 A0A0B4J2C4 111 aa16.71■□□□□ 0.27
HDAC3-201ENST00000305264 Q8N1X5 172 aa16.71■□□□□ 0.27
HDAC3-201ENST00000305264 HERC2O95714 4834 aa16.71■□□□□ 0.27
HDAC3-201ENST00000305264 FAM229AH3BQW9 127 aa16.7■□□□□ 0.26
HDAC3-201ENST00000305264 KRTAP10-4P60372 401 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms