RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
TRAPPC1-201ENST00000303731 LINC00158P58513 81 aa9.78□□□□□ -0.84
TRAPPC1-201ENST00000303731 IGKV2D-26A0A0A0MRZ7 120 aa9.77□□□□□ -0.85
TRAPPC1-201ENST00000303731 TMEM238C9JI98 176 aa9.77□□□□□ -0.85
TRAPPC1-201ENST00000303731 M0R378 163 aa9.77□□□□□ -0.85
TRAPPC1-201ENST00000303731 PRLHP81277 87 aa9.77□□□□□ -0.85
TRAPPC1-201ENST00000303731 LINC00587B1AMM8 73 aa9.76□□□□□ -0.85
TRAPPC1-201ENST00000303731 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
TRAPPC1-201ENST00000303731 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
TRAPPC1-201ENST00000303731 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
TRAPPC1-201ENST00000303731 ATP6V1G1O75348 118 aa9.75□□□□□ -0.85
TRAPPC1-201ENST00000303731 HERV-K104P63124 156 aa9.75□□□□□ -0.85
TRAPPC1-201ENST00000303731 LINC00304Q8N9R0 145 aa9.75□□□□□ -0.85
TRAPPC1-201ENST00000303731 HSBP1O75506 76 aa9.74□□□□□ -0.85
TRAPPC1-201ENST00000303731 CBLN2Q8IUK8 224 aa9.74□□□□□ -0.85
TRAPPC1-201ENST00000303731 Q8NDZ9 215 aa9.73□□□□□ -0.85
TRAPPC1-201ENST00000303731 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
TRAPPC1-201ENST00000303731 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
TRAPPC1-201ENST00000303731 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 PRYO14603 147 aa9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 SMIM13P0DJ93 91 aa9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-201ENST00000303731 MYMXA0A1B0GTQ4 84 aa9.69□□□□□ -0.86
TRAPPC1-201ENST00000303731 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
TRAPPC1-201ENST00000303731 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
TRAPPC1-201ENST00000303731 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
TRAPPC1-201ENST00000303731 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
TRAPPC1-201ENST00000303731 MUC2Q02817 5179 aa9.67□□□□□ -0.86
TRAPPC1-201ENST00000303731 S100A12P80511 92 aa9.67□□□□□ -0.86
TRAPPC1-201ENST00000303731 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
TRAPPC1-201ENST00000303731 LINC00337Q8N6G1 96 aa9.67□□□□□ -0.86
TRAPPC1-201ENST00000303731 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
TRAPPC1-201ENST00000303731 PLNP26678 52 aa9.66□□□□□ -0.86
TRAPPC1-201ENST00000303731 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
TRAPPC1-201ENST00000303731 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
TRAPPC1-201ENST00000303731 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
TRAPPC1-201ENST00000303731 TRGC2P03986 189 aa9.64□□□□□ -0.87
TRAPPC1-201ENST00000303731 SPRR1AP35321 89 aa9.64□□□□□ -0.87
TRAPPC1-201ENST00000303731 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
TRAPPC1-201ENST00000303731 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 H0Y8G0 127 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 NCR3O14931 201 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 LEPROTO15243 131 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 TPRXLQ17RH7 258 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
TRAPPC1-201ENST00000303731 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 SERF1AO75920 110 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 NMUP48645 174 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 HERVK_113P61574 105 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 C3orf22Q8N5N4 141 aa9.62□□□□□ -0.87
TRAPPC1-201ENST00000303731 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 TRBV10-3A0A0K0K1G6 114 aa9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 TRBV10-2A0A0K0K1G8 114 aa9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 DPM2O94777 84 aa9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 C4orf48Q5BLP8 95 aa9.6□□□□□ -0.87
TRAPPC1-201ENST00000303731 J3QQQ9 107 aa9.59□□□□□ -0.87
TRAPPC1-201ENST00000303731 MIEN1Q9BRT3 115 aa9.59□□□□□ -0.87
TRAPPC1-201ENST00000303731 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
TRAPPC1-201ENST00000303731 LINC00310P59036 64 aa9.58□□□□□ -0.88
TRAPPC1-201ENST00000303731 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
TRAPPC1-201ENST00000303731 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC1-201ENST00000303731 SMCR5Q8TEV8 140 aa9.58□□□□□ -0.88
TRAPPC1-201ENST00000303731 IGKCP01834 107 aa9.57□□□□□ -0.88
TRAPPC1-201ENST00000303731 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
TRAPPC1-201ENST00000303731 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC1-201ENST00000303731 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC1-201ENST00000303731 DDTP30046 118 aa9.56□□□□□ -0.88
TRAPPC1-201ENST00000303731 LINC00483Q53H64 154 aa9.56□□□□□ -0.88
TRAPPC1-201ENST00000303731 NDUFC2O95298 119 aa9.55□□□□□ -0.88
TRAPPC1-201ENST00000303731 FABP4P15090 132 aa9.55□□□□□ -0.88
TRAPPC1-201ENST00000303731 B5MCH6 92 aa9.54□□□□□ -0.88
TRAPPC1-201ENST00000303731 SPINK1P00995 79 aa9.54□□□□□ -0.88
TRAPPC1-201ENST00000303731 DAND5Q8N907 189 aa9.54□□□□□ -0.88
TRAPPC1-201ENST00000303731 PPDPFQ9H3Y8 114 aa9.54□□□□□ -0.88
TRAPPC1-201ENST00000303731 Q8NBF4 154 aa9.53□□□□□ -0.88
TRAPPC1-201ENST00000303731 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
TRAPPC1-201ENST00000303731 Q6ZRX8 168 aa9.52□□□□□ -0.89
TRAPPC1-201ENST00000303731 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
TRAPPC1-201ENST00000303731 COLCA2A8K830 154 aa9.51□□□□□ -0.89
TRAPPC1-201ENST00000303731 JOSD1Q15040 202 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC1-201ENST00000303731 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
TRAPPC1-201ENST00000303731 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
TRAPPC1-201ENST00000303731 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
TRAPPC1-201ENST00000303731 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
TRAPPC1-201ENST00000303731 E9PLD3 99 aa9.49□□□□□ -0.89
TRAPPC1-201ENST00000303731 RPS29P62273 56 aaKnown RBP9.49□□□□□ -0.89
TRAPPC1-201ENST00000303731 SSBP3-AS1Q7Z2R9 100 aa9.49□□□□□ -0.89
TRAPPC1-201ENST00000303731 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
TRAPPC1-201ENST00000303731 A0A0J9YXY3 114 aa9.47□□□□□ -0.89
TRAPPC1-201ENST00000303731 Q9BRP9 147 aa9.47□□□□□ -0.89
TRAPPC1-201ENST00000303731 SLC7A5P1Q8MH63 180 aa9.46□□□□□ -0.9
TRAPPC1-201ENST00000303731 IGLV9-49A0A0B4J1Y8 123 aa9.45□□□□□ -0.9
TRAPPC1-201ENST00000303731 C5orf52A6NGY3 159 aa9.45□□□□□ -0.9
TRAPPC1-201ENST00000303731 ZNF73O43830 326 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC1-201ENST00000303731 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
TRAPPC1-201ENST00000303731 HINT1P49773 126 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms