RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 MEIG1Q5JSS6 88 aa10.39□□□□□ -0.75
NDUFA3-201ENST00000303553 NDUFA12Q9UI09 145 aa10.39□□□□□ -0.75
NDUFA3-201ENST00000303553 PMCHL2Q9BQD1 86 aa10.38□□□□□ -0.75
NDUFA3-201ENST00000303553 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
NDUFA3-201ENST00000303553 NMUP48645 174 aa10.37□□□□□ -0.75
NDUFA3-201ENST00000303553 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
NDUFA3-201ENST00000303553 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
NDUFA3-201ENST00000303553 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
NDUFA3-201ENST00000303553 J3QQQ9 107 aa10.36□□□□□ -0.75
NDUFA3-201ENST00000303553 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
NDUFA3-201ENST00000303553 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
NDUFA3-201ENST00000303553 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
NDUFA3-201ENST00000303553 LINC01600Q96MT4 127 aa10.34□□□□□ -0.75
NDUFA3-201ENST00000303553 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
NDUFA3-201ENST00000303553 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
NDUFA3-201ENST00000303553 VPREB1P12018 145 aa10.33□□□□□ -0.76
NDUFA3-201ENST00000303553 LRP1Q07954 4544 aaKnown RBP10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 C20orf202A1L168 122 aa10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 RPL37AP8A6NKH3 93 aa10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 E9PLD3 99 aa10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 TSPEAR-AS2P59090 65 aa10.32□□□□□ -0.76
NDUFA3-201ENST00000303553 H0Y9J4 135 aa10.31□□□□□ -0.76
NDUFA3-201ENST00000303553 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
NDUFA3-201ENST00000303553 KRTDAPP60985 99 aa10.31□□□□□ -0.76
NDUFA3-201ENST00000303553 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
NDUFA3-201ENST00000303553 BCE1O60756 84 aa10.3□□□□□ -0.76
NDUFA3-201ENST00000303553 AKR1D1P51857 326 aa10.3□□□□□ -0.76
NDUFA3-201ENST00000303553 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
NDUFA3-201ENST00000303553 ZNF861PO60384 105 aa10.29□□□□□ -0.76
NDUFA3-201ENST00000303553 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
NDUFA3-201ENST00000303553 IGKV2-28A0A075B6P5 120 aa10.28□□□□□ -0.76
NDUFA3-201ENST00000303553 IGKV2D-28P01615 120 aa10.28□□□□□ -0.76
NDUFA3-201ENST00000303553 MT1HL1P0DM35 61 aa10.28□□□□□ -0.76
NDUFA3-201ENST00000303553 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
NDUFA3-201ENST00000303553 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
NDUFA3-201ENST00000303553 MIEN1Q9BRT3 115 aa10.27□□□□□ -0.77
NDUFA3-201ENST00000303553 HERC1Q15751 4861 aa10.27□□□□□ -0.77
NDUFA3-201ENST00000303553 IGKV2D-26A0A0A0MRZ7 120 aa10.26□□□□□ -0.77
NDUFA3-201ENST00000303553 M0R378 163 aa10.26□□□□□ -0.77
NDUFA3-201ENST00000303553 S100A2P29034 98 aa10.26□□□□□ -0.77
NDUFA3-201ENST00000303553 S100A6P06703 90 aa10.25□□□□□ -0.77
NDUFA3-201ENST00000303553 UBE2AP49459 152 aa10.24□□□□□ -0.77
NDUFA3-201ENST00000303553 Q8NDZ9 215 aa10.24□□□□□ -0.77
NDUFA3-201ENST00000303553 A0A0J9YXY3 114 aa10.23□□□□□ -0.77
NDUFA3-201ENST00000303553 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
NDUFA3-201ENST00000303553 LOC107984156A0A0G2JMH3 177 aa10.22□□□□□ -0.77
NDUFA3-201ENST00000303553 S100A12P80511 92 aa10.22□□□□□ -0.77
NDUFA3-201ENST00000303553 ARL17AQ8IVW1 177 aa10.22□□□□□ -0.77
NDUFA3-201ENST00000303553 DAND5Q8N907 189 aa10.22□□□□□ -0.77
NDUFA3-201ENST00000303553 HIST3H2BBQ8N257 126 aa10.21□□□□□ -0.77
NDUFA3-201ENST00000303553 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
NDUFA3-201ENST00000303553 NCR3O14931 201 aa10.2□□□□□ -0.78
NDUFA3-201ENST00000303553 KRTAP10-8P60410 259 aa10.2□□□□□ -0.78
NDUFA3-201ENST00000303553 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
NDUFA3-201ENST00000303553 PRYO14603 147 aa10.19□□□□□ -0.78
NDUFA3-201ENST00000303553 TIMM17BO60830 172 aa10.19□□□□□ -0.78
NDUFA3-201ENST00000303553 FAM19A1Q7Z5A9 133 aa10.19□□□□□ -0.78
NDUFA3-201ENST00000303553 HIST1H2BLQ99880 126 aa10.19□□□□□ -0.78
NDUFA3-201ENST00000303553 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
NDUFA3-201ENST00000303553 NDUFC2O95298 119 aa10.18□□□□□ -0.78
NDUFA3-201ENST00000303553 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
NDUFA3-201ENST00000303553 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
NDUFA3-201ENST00000303553 SPANXB1Q9NS25 103 aaPredicted RBP10.18□□□□□ -0.78
NDUFA3-201ENST00000303553 KRTAP1-4P0C5Y4 121 aa10.17□□□□□ -0.78
NDUFA3-201ENST00000303553 SNRPEP62304 92 aaKnown RBP10.17□□□□□ -0.78
NDUFA3-201ENST00000303553 PRLHP81277 87 aa10.15□□□□□ -0.78
NDUFA3-201ENST00000303553 ATOH7Q8N100 152 aa10.15□□□□□ -0.78
NDUFA3-201ENST00000303553 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
NDUFA3-201ENST00000303553 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
NDUFA3-201ENST00000303553 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
NDUFA3-201ENST00000303553 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
NDUFA3-201ENST00000303553 TRBV10-3A0A0K0K1G6 114 aa10.13□□□□□ -0.79
NDUFA3-201ENST00000303553 DDTP30046 118 aa10.13□□□□□ -0.79
NDUFA3-201ENST00000303553 NPC2P61916 151 aa10.13□□□□□ -0.79
NDUFA3-201ENST00000303553 S100A7L2Q5SY68 101 aa10.13□□□□□ -0.79
NDUFA3-201ENST00000303553 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 ANKRD39Q53RE8 183 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 COPS9Q8WXC6 57 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 LITAFQ99732 161 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
NDUFA3-201ENST00000303553 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
NDUFA3-201ENST00000303553 SPRR1AP35321 89 aa10.11□□□□□ -0.79
NDUFA3-201ENST00000303553 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
NDUFA3-201ENST00000303553 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
NDUFA3-201ENST00000303553 CRYGAP11844 174 aa10.1□□□□□ -0.79
NDUFA3-201ENST00000303553 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
NDUFA3-201ENST00000303553 HIGD2AQ9BW72 106 aa10.1□□□□□ -0.79
NDUFA3-201ENST00000303553 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
NDUFA3-201ENST00000303553 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
NDUFA3-201ENST00000303553 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
NDUFA3-201ENST00000303553 TNXBP22105 4242 aa10.07□□□□□ -0.8
NDUFA3-201ENST00000303553 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
NDUFA3-201ENST00000303553 Q6ZVH6 145 aa10.07□□□□□ -0.8
NDUFA3-201ENST00000303553 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
NDUFA3-201ENST00000303553 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
NDUFA3-201ENST00000303553 EIF4EBP3O60516 100 aaPredicted RBP10.06□□□□□ -0.8
NDUFA3-201ENST00000303553 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms