RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PRKDCP78527 4128 aaKnown RBP14.64□□□□□ -0.07
SMAD1-201ENST00000302085 DYNC2H1Q8NCM8 4307 aaKnown RBP14.64□□□□□ -0.07
SMAD1-201ENST00000302085 ETDBQ3ZM63 59 aa14.64□□□□□ -0.07
SMAD1-201ENST00000302085 XAGE1AQ9HD64 81 aa14.64□□□□□ -0.07
SMAD1-201ENST00000302085 NCR3O14931 201 aa14.61□□□□□ -0.07
SMAD1-201ENST00000302085 SLC25A20O43772 301 aa14.61□□□□□ -0.07
SMAD1-201ENST00000302085 SLPIP03973 132 aa14.61□□□□□ -0.07
SMAD1-201ENST00000302085 NDUFC2-KCTD14E9PQ53 114 aa14.6□□□□□ -0.07
SMAD1-201ENST00000302085 LECT2O14960 151 aa14.58□□□□□ -0.07
SMAD1-201ENST00000302085 FAM218AQ96MZ4 157 aa14.58□□□□□ -0.07
SMAD1-201ENST00000302085 TRBV10-2A0A0K0K1G8 114 aa14.58□□□□□ -0.08
SMAD1-201ENST00000302085 TMEM126AQ9H061 195 aa14.58□□□□□ -0.08
SMAD1-201ENST00000302085 DNAH1Q9P2D7 4330 aa14.58□□□□□ -0.08
SMAD1-201ENST00000302085 CSMD3Q7Z407 3707 aa14.57□□□□□ -0.08
SMAD1-201ENST00000302085 Q6ZRP5 223 aa14.57□□□□□ -0.08
SMAD1-201ENST00000302085 M0QXV9 152 aa14.56□□□□□ -0.08
SMAD1-201ENST00000302085 CARD19Q96LW7 228 aa14.56□□□□□ -0.08
SMAD1-201ENST00000302085 RNF151Q2KHN1 245 aa14.56□□□□□ -0.08
SMAD1-201ENST00000302085 GAGE2EQ4V326 116 aa14.56□□□□□ -0.08
SMAD1-201ENST00000302085 GAGE2DQ9UEU5 116 aa14.56□□□□□ -0.08
SMAD1-201ENST00000302085 ANKRD29Q8N6D5 301 aa14.55□□□□□ -0.08
SMAD1-201ENST00000302085 LINC01600Q96MT4 127 aa14.55□□□□□ -0.08
SMAD1-201ENST00000302085 K7ERU9 68 aa14.54□□□□□ -0.08
SMAD1-201ENST00000302085 RPL18AQ02543 176 aaKnown RBP14.54□□□□□ -0.08
SMAD1-201ENST00000302085 H0YGX0 51 aa14.53□□□□□ -0.08
SMAD1-201ENST00000302085 TRACP01848 142 aa14.53□□□□□ -0.08
SMAD1-201ENST00000302085 S100A7L2Q5SY68 101 aa14.53□□□□□ -0.08
SMAD1-201ENST00000302085 TEN1Q86WV5 123 aa14.53□□□□□ -0.08
SMAD1-201ENST00000302085 IGLV6-57P01721 117 aa14.51□□□□□ -0.09
SMAD1-201ENST00000302085 VPREB1P12018 145 aa14.51□□□□□ -0.09
SMAD1-201ENST00000302085 NBDYA0A0U1RRE5 68 aa14.51□□□□□ -0.09
SMAD1-201ENST00000302085 TENM2Q9NT68 2774 aa14.5□□□□□ -0.09
SMAD1-201ENST00000302085 TLX1NBP0CAT3 122 aa14.5□□□□□ -0.09
SMAD1-201ENST00000302085 C9orf129Q5T035 196 aaKnown RBP14.5□□□□□ -0.09
SMAD1-201ENST00000302085 A0A087WYN8 130 aa14.49□□□□□ -0.09
SMAD1-201ENST00000302085 LYSTQ99698 3801 aa14.48□□□□□ -0.09
SMAD1-201ENST00000302085 H3BT86 120 aa14.48□□□□□ -0.09
SMAD1-201ENST00000302085 PSCAO43653 123 aa14.48□□□□□ -0.09
SMAD1-201ENST00000302085 DNAH7Q8WXX0 4024 aa14.48□□□□□ -0.09
SMAD1-201ENST00000302085 TTC32Q5I0X7 151 aa14.47□□□□□ -0.09
SMAD1-201ENST00000302085 TRBV10-3A0A0K0K1G6 114 aa14.46□□□□□ -0.09
SMAD1-201ENST00000302085 PLECQ15149 4684 aaKnown RBP14.46□□□□□ -0.09
SMAD1-201ENST00000302085 C6orf99Q4VX62 202 aa14.45□□□□□ -0.1
SMAD1-201ENST00000302085 PPDPFLQ8WWR9 84 aa14.45□□□□□ -0.1
SMAD1-201ENST00000302085 M0R378 163 aa14.43□□□□□ -0.1
SMAD1-201ENST00000302085 BAALC-AS2P0C853 105 aa14.42□□□□□ -0.1
SMAD1-201ENST00000302085 FBN3Q75N90 2809 aa14.42□□□□□ -0.1
SMAD1-201ENST00000302085 STARD9Q9P2P6 4700 aa14.42□□□□□ -0.1
SMAD1-201ENST00000302085 SERTAD4-AS1Q5TG53 156 aa14.4□□□□□ -0.1
SMAD1-201ENST00000302085 Q6ZRN7 208 aaPredicted RBP14.4□□□□□ -0.1
SMAD1-201ENST00000302085 J3QR89 54 aa14.39□□□□□ -0.11
SMAD1-201ENST00000302085 GAGE2BQ13066 116 aa14.39□□□□□ -0.11
SMAD1-201ENST00000302085 TRAV23DV6A0A075B6W5 121 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 LOC107984640A0A0U1RRK4 108 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 TEX49A0A1B0GTD5 131 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 M0R2N4 97 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 CNBPP62633 177 aaKnown RBP14.38□□□□□ -0.11
SMAD1-201ENST00000302085 C22orf24Q9Y442 160 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 PLA2G2DQ9UNK4 145 aa14.38□□□□□ -0.11
SMAD1-201ENST00000302085 LRCOL1A6NCL2 159 aa14.37□□□□□ -0.11
SMAD1-201ENST00000302085 DNAL4O96015 105 aa14.37□□□□□ -0.11
SMAD1-201ENST00000302085 C14orf177Q52M58 125 aa14.36□□□□□ -0.11
SMAD1-201ENST00000302085 Q8N814 137 aa14.36□□□□□ -0.11
SMAD1-201ENST00000302085 A0A1B0GX51 115 aa14.35□□□□□ -0.11
SMAD1-201ENST00000302085 FAM168BA1KXE4 195 aa14.35□□□□□ -0.11
SMAD1-201ENST00000302085 LINC00575Q6W349 94 aa14.34□□□□□ -0.11
SMAD1-201ENST00000302085 ZNF73O43830 326 aaPredicted RBP14.34□□□□□ -0.11
SMAD1-201ENST00000302085 KRTAP7-1Q8IUC3 87 aa14.34□□□□□ -0.11
SMAD1-201ENST00000302085 LINC00167Q96N53 147 aa14.34□□□□□ -0.11
SMAD1-201ENST00000302085 VPS25Q9BRG1 176 aa14.34□□□□□ -0.11
SMAD1-201ENST00000302085 NKAPP1Q8N9T2 125 aa14.33□□□□□ -0.12
SMAD1-201ENST00000302085 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.33□□□□□ -0.12
SMAD1-201ENST00000302085 C7orf33Q8WU49 177 aa14.33□□□□□ -0.12
SMAD1-201ENST00000302085 DIRC1Q969H9 104 aa14.33□□□□□ -0.12
SMAD1-201ENST00000302085 IGLV5-37A0A075B6J1 123 aa14.32□□□□□ -0.12
SMAD1-201ENST00000302085 DNAH10Q8IVF4 4471 aa14.31□□□□□ -0.12
SMAD1-201ENST00000302085 VPS13DQ5THJ4 4388 aa14.31□□□□□ -0.12
SMAD1-201ENST00000302085 Q6ZR54 194 aa14.3□□□□□ -0.12
SMAD1-201ENST00000302085 ORMDL1Q9P0S3 153 aa14.28□□□□□ -0.12
SMAD1-201ENST00000302085 A0A096LNI7 61 aa14.27□□□□□ -0.12
SMAD1-201ENST00000302085 TRBV7-6A0A0J9YX20 115 aa14.27□□□□□ -0.12
SMAD1-201ENST00000302085 COX7BP24311 80 aa14.27□□□□□ -0.12
SMAD1-201ENST00000302085 hADV29S1A0JD25 119 aa14.27□□□□□ -0.13
SMAD1-201ENST00000302085 WWC2-AS2Q96NR7 200 aa14.27□□□□□ -0.13
SMAD1-201ENST00000302085 KCNQ1DNQ9H478 68 aa14.27□□□□□ -0.13
SMAD1-201ENST00000302085 CBY1Q9Y3M2 126 aa14.27□□□□□ -0.13
SMAD1-201ENST00000302085 C16orf90A8MZG2 172 aa14.25□□□□□ -0.13
SMAD1-201ENST00000302085 SNCGO76070 127 aa14.25□□□□□ -0.13
SMAD1-201ENST00000302085 ELOF1P60002 83 aaKnown RBP14.25□□□□□ -0.13
SMAD1-201ENST00000302085 FAM19A5Q7Z5A7 132 aaPredicted RBP14.25□□□□□ -0.13
SMAD1-201ENST00000302085 RPL37AP8A6NKH3 93 aa14.23□□□□□ -0.13
SMAD1-201ENST00000302085 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
SMAD1-201ENST00000302085 IGKV2-24A0A0C4DH68 120 aa14.22□□□□□ -0.13
SMAD1-201ENST00000302085 C9orf163Q8N9P6 203 aa14.22□□□□□ -0.13
SMAD1-201ENST00000302085 TGP01266 2768 aa14.2□□□□□ -0.14
SMAD1-201ENST00000302085 LY6G6CO95867 125 aa14.2□□□□□ -0.14
SMAD1-201ENST00000302085 MRPL55Q7Z7F7 128 aaKnown RBP14.2□□□□□ -0.14
SMAD1-201ENST00000302085 LINC00528Q8N1L1 170 aa14.2□□□□□ -0.14
SMAD1-201ENST00000302085 CDIP1Q9H305 208 aa14.2□□□□□ -0.14
SMAD1-201ENST00000302085 A0A087WTM6 91 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms