RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 A0A087WVE0 104 aa8.79□□□□□ -1
HIF3A-204ENST00000300862 Q8NDZ9 215 aa8.79□□□□□ -1
HIF3A-204ENST00000300862 PRO0628Q9UI54 55 aa8.79□□□□□ -1
HIF3A-204ENST00000300862 PKD1L1Q8TDX9 2849 aa8.79□□□□□ -1
HIF3A-204ENST00000300862 NCR3O14931 201 aa8.79□□□□□ -1
HIF3A-204ENST00000300862 NANOS2P60321 138 aaKnown RBP8.78□□□□□ -1
HIF3A-204ENST00000300862 C10orf25Q5T742 122 aa8.78□□□□□ -1
HIF3A-204ENST00000300862 IGHV4-30-4P0DP06 118 aa8.78□□□□□ -1
HIF3A-204ENST00000300862 KLK12Q9UKR0 248 aa8.77□□□□□ -1
HIF3A-204ENST00000300862 SPART-AS1P0CW21 52 aa8.77□□□□□ -1.01
HIF3A-204ENST00000300862 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
HIF3A-204ENST00000300862 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
HIF3A-204ENST00000300862 MIFP14174 115 aa8.76□□□□□ -1.01
HIF3A-204ENST00000300862 UPK3BQ9BT76 320 aa8.75□□□□□ -1.01
HIF3A-204ENST00000300862 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
HIF3A-204ENST00000300862 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
HIF3A-204ENST00000300862 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
HIF3A-204ENST00000300862 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
HIF3A-204ENST00000300862 LELP1Q5T871 98 aa8.73□□□□□ -1.01
HIF3A-204ENST00000300862 RETNQ9HD89 108 aa8.73□□□□□ -1.01
HIF3A-204ENST00000300862 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
HIF3A-204ENST00000300862 F8P00451 2351 aa8.73□□□□□ -1.01
HIF3A-204ENST00000300862 CYSRT1A8MQ03 144 aa8.72□□□□□ -1.01
HIF3A-204ENST00000300862 COX17Q14061 63 aa8.72□□□□□ -1.01
HIF3A-204ENST00000300862 C6orf99Q4VX62 202 aa8.72□□□□□ -1.01
HIF3A-204ENST00000300862 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
HIF3A-204ENST00000300862 ENHOQ6UWT2 76 aa8.72□□□□□ -1.01
HIF3A-204ENST00000300862 ZNF561-AS1K7EIQ3 104 aa8.71□□□□□ -1.02
HIF3A-204ENST00000300862 NDUFC2O95298 119 aa8.71□□□□□ -1.02
HIF3A-204ENST00000300862 Q8N814 137 aa8.71□□□□□ -1.02
HIF3A-204ENST00000300862 TENM3Q9P273 2699 aa8.71□□□□□ -1.02
HIF3A-204ENST00000300862 STAB1Q9NY15 2570 aa8.71□□□□□ -1.02
HIF3A-204ENST00000300862 TMEM258P61165 79 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 HRCT1Q6UXD1 115 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 OXTP01178 125 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 CCKP06307 115 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 LYPD5Q6UWN5 251 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 WFDC9Q8NEX5 89 aa8.7□□□□□ -1.02
HIF3A-204ENST00000300862 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
HIF3A-204ENST00000300862 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
HIF3A-204ENST00000300862 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
HIF3A-204ENST00000300862 LINC00167Q96N53 147 aa8.69□□□□□ -1.02
HIF3A-204ENST00000300862 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
HIF3A-204ENST00000300862 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
HIF3A-204ENST00000300862 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
HIF3A-204ENST00000300862 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
HIF3A-204ENST00000300862 ANK2Q01484 3957 aa8.67□□□□□ -1.02
HIF3A-204ENST00000300862 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
HIF3A-204ENST00000300862 Q5XG85 94 aa8.66□□□□□ -1.02
HIF3A-204ENST00000300862 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
HIF3A-204ENST00000300862 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
HIF3A-204ENST00000300862 NOTCH1P46531 2555 aa8.65□□□□□ -1.02
HIF3A-204ENST00000300862 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-204ENST00000300862 Q6ZTC4 211 aa8.65□□□□□ -1.02
HIF3A-204ENST00000300862 A0A0J9YWU9 116 aa8.65□□□□□ -1.03
HIF3A-204ENST00000300862 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.03
HIF3A-204ENST00000300862 PKIGQ9Y2B9 76 aa8.65□□□□□ -1.03
HIF3A-204ENST00000300862 FBN1P35555 2871 aaKnown RBP8.64□□□□□ -1.03
HIF3A-204ENST00000300862 TMEM256-PLSCR3K7ERE1 68 aa8.64□□□□□ -1.03
HIF3A-204ENST00000300862 GHRHP01286 108 aa8.64□□□□□ -1.03
HIF3A-204ENST00000300862 LINC00575Q6W349 94 aa8.64□□□□□ -1.03
HIF3A-204ENST00000300862 MAST4O15021 2626 aa8.63□□□□□ -1.03
HIF3A-204ENST00000300862 TRAV23DV6A0A075B6W5 121 aa8.63□□□□□ -1.03
HIF3A-204ENST00000300862 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
HIF3A-204ENST00000300862 ATP5EP2Q5VTU8 51 aa8.63□□□□□ -1.03
HIF3A-204ENST00000300862 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
HIF3A-204ENST00000300862 IGLV6-57P01721 117 aa8.61□□□□□ -1.03
HIF3A-204ENST00000300862 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
HIF3A-204ENST00000300862 LINC00336Q6ZUF6 198 aa8.61□□□□□ -1.03
HIF3A-204ENST00000300862 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
HIF3A-204ENST00000300862 ESRGQ1W209 222 aa8.59□□□□□ -1.03
HIF3A-204ENST00000300862 Q6ZQY7 126 aa8.59□□□□□ -1.03
HIF3A-204ENST00000300862 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
HIF3A-204ENST00000300862 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
HIF3A-204ENST00000300862 KRTAP26-1Q6PEX3 210 aa8.58□□□□□ -1.04
HIF3A-204ENST00000300862 Q6ZRU5 148 aa8.58□□□□□ -1.04
HIF3A-204ENST00000300862 M0R2N4 97 aa8.57□□□□□ -1.04
HIF3A-204ENST00000300862 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
HIF3A-204ENST00000300862 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 Q6ZQT0 140 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 MUC7Q8TAX7 377 aa8.56□□□□□ -1.04
HIF3A-204ENST00000300862 RBM3P98179 157 aaKnown RBP8.55□□□□□ -1.04
HIF3A-204ENST00000300862 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
HIF3A-204ENST00000300862 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
HIF3A-204ENST00000300862 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
HIF3A-204ENST00000300862 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
HIF3A-204ENST00000300862 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
HIF3A-204ENST00000300862 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
HIF3A-204ENST00000300862 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
HIF3A-204ENST00000300862 H3BNG1 76 aa8.53□□□□□ -1.04
HIF3A-204ENST00000300862 VPREB1P12018 145 aa8.53□□□□□ -1.04
HIF3A-204ENST00000300862 COL6A5A8TX70 2615 aa8.52□□□□□ -1.04
HIF3A-204ENST00000300862 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
HIF3A-204ENST00000300862 NBEAL1Q6ZS30 2694 aa8.52□□□□□ -1.05
HIF3A-204ENST00000300862 LOC110117498A0A087WWA1 95 aa8.52□□□□□ -1.05
HIF3A-204ENST00000300862 PRB2P02812 416 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms