RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TCL1BO95988 128 aa10.29□□□□□ -0.76
HERPUD1-201ENST00000300302 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
HERPUD1-201ENST00000300302 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
HERPUD1-201ENST00000300302 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
HERPUD1-201ENST00000300302 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
HERPUD1-201ENST00000300302 XAGE1AQ9HD64 81 aa10.28□□□□□ -0.76
HERPUD1-201ENST00000300302 SLPIP03973 132 aa10.27□□□□□ -0.77
HERPUD1-201ENST00000300302 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
HERPUD1-201ENST00000300302 RPL28P46779 137 aaKnown RBP10.27□□□□□ -0.77
HERPUD1-201ENST00000300302 F8W1H4 67 aa10.26□□□□□ -0.77
HERPUD1-201ENST00000300302 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-201ENST00000300302 ATXN8Q156A1 80 aa10.26□□□□□ -0.77
HERPUD1-201ENST00000300302 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
HERPUD1-201ENST00000300302 NCR3O14931 201 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 Q6ZRP5 223 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 TGP01266 2768 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
HERPUD1-201ENST00000300302 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 WFDC2Q14508 124 aa10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 OCIAD2Q56VL3 154 aa10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 S100A7L2Q5SY68 101 aa10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 Q8NDZ9 215 aa10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
HERPUD1-201ENST00000300302 M0R2N4 97 aa10.23□□□□□ -0.77
HERPUD1-201ENST00000300302 MTURNQ8N3F0 131 aa10.23□□□□□ -0.77
HERPUD1-201ENST00000300302 VPS13DQ5THJ4 4388 aa10.23□□□□□ -0.77
HERPUD1-201ENST00000300302 CNBPP62633 177 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-201ENST00000300302 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.77
HERPUD1-201ENST00000300302 Q6ZRN7 208 aaPredicted RBP10.21□□□□□ -0.77
HERPUD1-201ENST00000300302 CLEC2BQ92478 149 aa10.21□□□□□ -0.77
HERPUD1-201ENST00000300302 LOC107984640A0A0U1RRK4 108 aa10.21□□□□□ -0.78
HERPUD1-201ENST00000300302 C3orf84H3BNL1 204 aa10.21□□□□□ -0.78
HERPUD1-201ENST00000300302 LST1O00453 97 aa10.2□□□□□ -0.78
HERPUD1-201ENST00000300302 VPREB1P12018 145 aa10.2□□□□□ -0.78
HERPUD1-201ENST00000300302 LRCOL1A6NCL2 159 aa10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 H0YGX0 51 aa10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 LY6G6CO95867 125 aa10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 Q6ZR54 194 aa10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
HERPUD1-201ENST00000300302 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
HERPUD1-201ENST00000300302 C9JAW5 83 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 M0R378 163 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 K7ERU9 68 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 LINC00476Q8WZB0 136 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 PLA2G2DQ9UNK4 145 aa10.17□□□□□ -0.78
HERPUD1-201ENST00000300302 ETDBQ3ZM63 59 aa10.16□□□□□ -0.78
HERPUD1-201ENST00000300302 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.78
HERPUD1-201ENST00000300302 CBY1Q9Y3M2 126 aa10.15□□□□□ -0.78
HERPUD1-201ENST00000300302 SLC25A20O43772 301 aa10.15□□□□□ -0.79
HERPUD1-201ENST00000300302 TRACP01848 142 aa10.15□□□□□ -0.79
HERPUD1-201ENST00000300302 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.79
HERPUD1-201ENST00000300302 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
HERPUD1-201ENST00000300302 M0QXV9 152 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 C1orf134Q5TEV5 83 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 TRAV23DV6A0A075B6W5 121 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 Q8N814 137 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 FAM218AQ96MZ4 157 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
HERPUD1-201ENST00000300302 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
HERPUD1-201ENST00000300302 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
HERPUD1-201ENST00000300302 ANKRD29Q8N6D5 301 aa10.11□□□□□ -0.79
HERPUD1-201ENST00000300302 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
HERPUD1-201ENST00000300302 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
HERPUD1-201ENST00000300302 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 A0A087WTM6 91 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 DNAL4O96015 105 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 H3BT86 120 aa10.1□□□□□ -0.79
HERPUD1-201ENST00000300302 A0A087WYN8 130 aa10.09□□□□□ -0.79
HERPUD1-201ENST00000300302 SNCGO76070 127 aa10.09□□□□□ -0.79
HERPUD1-201ENST00000300302 TEN1Q86WV5 123 aa10.09□□□□□ -0.79
HERPUD1-201ENST00000300302 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
HERPUD1-201ENST00000300302 A0A096LNI7 61 aa10.08□□□□□ -0.8
HERPUD1-201ENST00000300302 A0A1B0GX51 115 aa10.08□□□□□ -0.8
HERPUD1-201ENST00000300302 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-201ENST00000300302 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
HERPUD1-201ENST00000300302 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
HERPUD1-201ENST00000300302 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
HERPUD1-201ENST00000300302 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
HERPUD1-201ENST00000300302 TRBV7-6A0A0J9YX20 115 aa10.06□□□□□ -0.8
HERPUD1-201ENST00000300302 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
HERPUD1-201ENST00000300302 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
HERPUD1-201ENST00000300302 MRPL55Q7Z7F7 128 aaKnown RBP10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 PPDPFLQ8WWR9 84 aa10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 KCNQ1DNQ9H478 68 aa10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 LINC00575Q6W349 94 aa10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
HERPUD1-201ENST00000300302 BAALC-AS2P0C853 105 aa10.03□□□□□ -0.8
HERPUD1-201ENST00000300302 COX7BP24311 80 aa10.03□□□□□ -0.8
HERPUD1-201ENST00000300302 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
HERPUD1-201ENST00000300302 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
HERPUD1-201ENST00000300302 DNAH2Q9P225 4427 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms