RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 EPM2AB3EWF7 344 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 SNURFQ9Y675 71 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 LINC00208Q96KT6 92 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 C6orf48Q9UBA6 75 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 ATP5EP2Q5VTU8 51 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 MAST4O15021 2626 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 ATRQ13535 2644 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 YPEL4Q96NS1 127 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 hDV103S1A0JD37 113 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 LINC00575Q6W349 94 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 AMELXQ99217 191 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
RAG1-201ENST00000299440 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
RAG1-201ENST00000299440 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
RAG1-201ENST00000299440 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
RAG1-201ENST00000299440 J3KT08 172 aa4.85□□□□□ -1.63
RAG1-201ENST00000299440 Q9UF83 564 aa4.85□□□□□ -1.63
RAG1-201ENST00000299440 Q96NJ1 140 aa4.85□□□□□ -1.63
RAG1-201ENST00000299440 C19orf73Q9NVV2 129 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 HELZ2Q9BYK8 2649 aaKnown RBP4.84□□□□□ -1.63
RAG1-201ENST00000299440 KIAA0087Q14695 138 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 LINC01561Q8N1V8 128 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 NDUFC2O95298 119 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 C7orf65Q6ZTY9 151 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 A0A087WTM6 91 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 Q8NBF4 154 aa4.84□□□□□ -1.63
RAG1-201ENST00000299440 A0A096LNT2 108 aa4.83□□□□□ -1.64
RAG1-201ENST00000299440 KRTAP1-3Q8IUG1 177 aa4.83□□□□□ -1.64
RAG1-201ENST00000299440 COL27A1Q8IZC6 1860 aaPredicted RBP4.83□□□□□ -1.64
RAG1-201ENST00000299440 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
RAG1-201ENST00000299440 LINC00528Q8N1L1 170 aa4.83□□□□□ -1.64
RAG1-201ENST00000299440 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
RAG1-201ENST00000299440 BCE1O60756 84 aa4.82□□□□□ -1.64
RAG1-201ENST00000299440 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
RAG1-201ENST00000299440 IGHV3OR16-9A0A0B4J2B5 98 aa4.82□□□□□ -1.64
RAG1-201ENST00000299440 CASC10Q5T4H9 136 aa4.82□□□□□ -1.64
RAG1-201ENST00000299440 LINC00313P59037 77 aa4.81□□□□□ -1.64
RAG1-201ENST00000299440 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
RAG1-201ENST00000299440 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
RAG1-201ENST00000299440 SETXQ7Z333 2677 aaKnown RBP4.81□□□□□ -1.64
RAG1-201ENST00000299440 H0Y9P7 68 aa4.81□□□□□ -1.64
RAG1-201ENST00000299440 KRTAP1-1Q07627 177 aa4.81□□□□□ -1.64
RAG1-201ENST00000299440 MT-ATP8P03928 68 aa4.8□□□□□ -1.64
RAG1-201ENST00000299440 A6NED7 52 aa4.8□□□□□ -1.64
RAG1-201ENST00000299440 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
RAG1-201ENST00000299440 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
RAG1-201ENST00000299440 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
RAG1-201ENST00000299440 APLNQ9ULZ1 77 aa4.79□□□□□ -1.64
RAG1-201ENST00000299440 FAM19A4Q96LR4 140 aa4.78□□□□□ -1.64
RAG1-201ENST00000299440 UTRNP46939 3433 aa4.77□□□□□ -1.65
RAG1-201ENST00000299440 TNP2Q05952 138 aa4.77□□□□□ -1.65
RAG1-201ENST00000299440 C2orf91Q6ZV80 131 aa4.77□□□□□ -1.65
RAG1-201ENST00000299440 Q6ZRX8 168 aa4.77□□□□□ -1.65
RAG1-201ENST00000299440 M0R2T5 61 aa4.76□□□□□ -1.65
RAG1-201ENST00000299440 URB1-AS1Q96HZ7 61 aa4.76□□□□□ -1.65
RAG1-201ENST00000299440 CSNK1G2-AS1Q8NCQ2 148 aa4.76□□□□□ -1.65
RAG1-201ENST00000299440 ANAPC11Q9NYG5 84 aa4.76□□□□□ -1.65
RAG1-201ENST00000299440 A0A087WVE0 104 aa4.76□□□□□ -1.65
RAG1-201ENST00000299440 A0A0U1RQV1 116 aa4.75□□□□□ -1.65
RAG1-201ENST00000299440 PCSK5Q92824 1860 aa4.75□□□□□ -1.65
RAG1-201ENST00000299440 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
RAG1-201ENST00000299440 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
RAG1-201ENST00000299440 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
RAG1-201ENST00000299440 UQCRQO14949 82 aa4.74□□□□□ -1.65
RAG1-201ENST00000299440 C1orf64Q8NEQ6 169 aa4.73□□□□□ -1.65
RAG1-201ENST00000299440 OBSCN-AS1Q96MR7 158 aa4.73□□□□□ -1.65
RAG1-201ENST00000299440 ZNF861PO60384 105 aa4.73□□□□□ -1.65
RAG1-201ENST00000299440 SPAG11AQ6PDA7 123 aa4.73□□□□□ -1.65
RAG1-201ENST00000299440 V9GYY9 64 aa4.73□□□□□ -1.65
RAG1-201ENST00000299440 ELOF1P60002 83 aaKnown RBP4.72□□□□□ -1.65
RAG1-201ENST00000299440 NDUFC1O43677 76 aa4.72□□□□□ -1.65
RAG1-201ENST00000299440 CFAP46Q8IYW2 2715 aa4.72□□□□□ -1.65
RAG1-201ENST00000299440 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
RAG1-201ENST00000299440 A0A096LNJ9 63 aa4.71□□□□□ -1.65
RAG1-201ENST00000299440 ITPR3Q14573 2671 aa4.71□□□□□ -1.65
RAG1-201ENST00000299440 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 C9orf163Q8N9P6 203 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 DSCR10P59022 87 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 CEP350Q5VT06 3117 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
RAG1-201ENST00000299440 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
RAG1-201ENST00000299440 FAM240AA0A1B0GVK7 77 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 SMIM29Q86T20 159 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 C15orf56Q8N910 161 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 PSORS1C2Q9UIG4 136 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
RAG1-201ENST00000299440 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
RAG1-201ENST00000299440 GIG44P09565 113 aaPredicted RBP4.69□□□□□ -1.66
RAG1-201ENST00000299440 IGLV1-50A0A075B6I6 118 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 VPREB1P12018 145 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
RAG1-201ENST00000299440 BPTFQ12830 3046 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 LINC00310P59036 64 aa4.68□□□□□ -1.66
RAG1-201ENST00000299440 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
RAG1-201ENST00000299440 TP53AIP1Q9HCN2 124 aa4.67□□□□□ -1.66
RAG1-201ENST00000299440 Q6ZSA8 131 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms