RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 Q6ZTC4 211 aa3.96□□□□□ -1.78
CPSF2-201ENST00000298875 UQCR11O14957 56 aa3.96□□□□□ -1.78
CPSF2-201ENST00000298875 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 FHL2Q14192 279 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 SPATA3Q8NHX4 192 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 BRI3O95415 125 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 SMIM29Q86T20 159 aa3.95□□□□□ -1.78
CPSF2-201ENST00000298875 USP9YO00507 2555 aaPredicted RBP3.94□□□□□ -1.78
CPSF2-201ENST00000298875 FAM229AH3BQW9 127 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 A0A1B0GU69 56 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 JMJD1CQ15652 2540 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 Q6ZSN1 163 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 C4orf26Q17RF5 130 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 C1orf134Q5TEV5 83 aa3.94□□□□□ -1.78
CPSF2-201ENST00000298875 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
CPSF2-201ENST00000298875 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
CPSF2-201ENST00000298875 A0A1B0GUV1 79 aa3.93□□□□□ -1.78
CPSF2-201ENST00000298875 SMR3AQ99954 134 aa3.93□□□□□ -1.78
CPSF2-201ENST00000298875 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
CPSF2-201ENST00000298875 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
CPSF2-201ENST00000298875 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
CPSF2-201ENST00000298875 COL27A1Q8IZC6 1860 aaPredicted RBP3.92□□□□□ -1.78
CPSF2-201ENST00000298875 IGF2RP11717 2491 aa3.92□□□□□ -1.78
CPSF2-201ENST00000298875 Q6ZRU5 148 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 IGLV1-51P01701 117 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 KIAA0087Q14695 138 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 CDSNQ15517 529 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 A0A096LNJ9 63 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 J3QL48 77 aa3.91□□□□□ -1.78
CPSF2-201ENST00000298875 AVPP01185 164 aa3.9□□□□□ -1.78
CPSF2-201ENST00000298875 C16orf95Q9H693 158 aa3.9□□□□□ -1.78
CPSF2-201ENST00000298875 CHD8Q9HCK8 2581 aa3.9□□□□□ -1.78
CPSF2-201ENST00000298875 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
CPSF2-201ENST00000298875 SPINT4Q6UDR6 99 aa3.89□□□□□ -1.79
CPSF2-201ENST00000298875 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
CPSF2-201ENST00000298875 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
CPSF2-201ENST00000298875 SMCR5Q8TEV8 140 aa3.88□□□□□ -1.79
CPSF2-201ENST00000298875 Q1T7F1 81 aa3.88□□□□□ -1.79
CPSF2-201ENST00000298875 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
CPSF2-201ENST00000298875 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
CPSF2-201ENST00000298875 Q8NBF4 154 aa3.87□□□□□ -1.79
CPSF2-201ENST00000298875 PIEZO2Q9H5I5 2752 aa3.87□□□□□ -1.79
CPSF2-201ENST00000298875 Q6ZQT0 140 aa3.87□□□□□ -1.79
CPSF2-201ENST00000298875 FAM19A4Q96LR4 140 aa3.87□□□□□ -1.79
CPSF2-201ENST00000298875 ANKRD17O75179 2603 aaKnown RBP3.87□□□□□ -1.79
CPSF2-201ENST00000298875 CEP295Q9C0D2 2601 aa3.86□□□□□ -1.79
CPSF2-201ENST00000298875 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
CPSF2-201ENST00000298875 SMCPP49901 116 aaPredicted RBP3.86□□□□□ -1.79
CPSF2-201ENST00000298875 RPL37AP61513 92 aaKnown RBP3.86□□□□□ -1.79
CPSF2-201ENST00000298875 TM2D3Q9BRN9 247 aa3.86□□□□□ -1.79
CPSF2-201ENST00000298875 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 LINC00313P59037 77 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 COX6B2Q6YFQ2 88 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 FAM218AQ96MZ4 157 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 COA5Q86WW8 74 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 KRTAP10-9P60411 292 aa3.85□□□□□ -1.79
CPSF2-201ENST00000298875 ZFHX2Q9C0A1 2572 aaPredicted RBP3.84□□□□□ -1.79
CPSF2-201ENST00000298875 FASNP49327 2511 aaKnown RBP3.84□□□□□ -1.79
CPSF2-201ENST00000298875 LINC01600Q96MT4 127 aa3.84□□□□□ -1.79
CPSF2-201ENST00000298875 SSBP3-AS1Q7Z2R9 100 aa3.84□□□□□ -1.79
CPSF2-201ENST00000298875 DMAC1Q96GE9 116 aa3.84□□□□□ -1.8
CPSF2-201ENST00000298875 ANKRD11Q6UB99 2663 aaPredicted RBP3.83□□□□□ -1.8
CPSF2-201ENST00000298875 FHL3Q13643 280 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 LINC00476Q8WZB0 136 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 MDFIQ99750 246 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 LINC00336Q6ZUF6 198 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 COL4A2P08572 1712 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 H7BZZ5 65 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
CPSF2-201ENST00000298875 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
CPSF2-201ENST00000298875 EPG5Q9HCE0 2579 aa3.82□□□□□ -1.8
CPSF2-201ENST00000298875 Q6ZRX8 168 aa3.82□□□□□ -1.8
CPSF2-201ENST00000298875 Q96NJ1 140 aa3.82□□□□□ -1.8
CPSF2-201ENST00000298875 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
CPSF2-201ENST00000298875 PCSK5Q92824 1860 aa3.82□□□□□ -1.8
CPSF2-201ENST00000298875 Q75L30 129 aa3.81□□□□□ -1.8
CPSF2-201ENST00000298875 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
CPSF2-201ENST00000298875 GVQW2A0A096LPI5 108 aaPredicted RBP3.81□□□□□ -1.8
CPSF2-201ENST00000298875 RBM12B-AS1Q9P1G2 102 aa3.81□□□□□ -1.8
CPSF2-201ENST00000298875 IGHV3OR16-9A0A0B4J2B5 98 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 H3BS24 57 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 ST20-AS1Q8NBB2 130 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 A8MWP4 228 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 KIF25-AS1Q9Y6Z4 181 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 RTL8CO15255 209 aa3.8□□□□□ -1.8
CPSF2-201ENST00000298875 TYMSOSQ8TAI1 123 aa3.79□□□□□ -1.8
CPSF2-201ENST00000298875 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
CPSF2-201ENST00000298875 A8MUN3 132 aa3.79□□□□□ -1.8
CPSF2-201ENST00000298875 C16orf90A8MZG2 172 aa3.79□□□□□ -1.8
CPSF2-201ENST00000298875 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
CPSF2-201ENST00000298875 IGLV6-57P01721 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms