RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 MUC7Q8TAX7 377 aa8.97□□□□□ -0.97
CHMP4C-201ENST00000297265 CASC10Q5T4H9 136 aa8.96□□□□□ -0.97
CHMP4C-201ENST00000297265 Q6ZRU5 148 aa8.96□□□□□ -0.97
CHMP4C-201ENST00000297265 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.98
CHMP4C-201ENST00000297265 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
CHMP4C-201ENST00000297265 C2orf48Q96LS8 159 aa8.96□□□□□ -0.98
CHMP4C-201ENST00000297265 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
CHMP4C-201ENST00000297265 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
CHMP4C-201ENST00000297265 TEN1Q86WV5 123 aa8.95□□□□□ -0.98
CHMP4C-201ENST00000297265 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
CHMP4C-201ENST00000297265 DNAH10Q8IVF4 4471 aa8.94□□□□□ -0.98
CHMP4C-201ENST00000297265 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
CHMP4C-201ENST00000297265 SLPIP03973 132 aa8.93□□□□□ -0.98
CHMP4C-201ENST00000297265 NHLRC4P0CG21 123 aaPredicted RBP8.93□□□□□ -0.98
CHMP4C-201ENST00000297265 OR13C6PQ8NH95 151 aa8.93□□□□□ -0.98
CHMP4C-201ENST00000297265 RNF151Q2KHN1 245 aa8.92□□□□□ -0.98
CHMP4C-201ENST00000297265 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
CHMP4C-201ENST00000297265 STARD9Q9P2P6 4700 aa8.9□□□□□ -0.98
CHMP4C-201ENST00000297265 F8WDY8 70 aa8.9□□□□□ -0.98
CHMP4C-201ENST00000297265 NCR3O14931 201 aa8.9□□□□□ -0.98
CHMP4C-201ENST00000297265 TRACP01848 142 aa8.9□□□□□ -0.98
CHMP4C-201ENST00000297265 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
CHMP4C-201ENST00000297265 A0A087WYN8 130 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 H3BT86 120 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 Q6ZRP5 223 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 NDUFC2-KCTD14E9PQ53 114 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 PPDPFLQ8WWR9 84 aa8.89□□□□□ -0.99
CHMP4C-201ENST00000297265 H0YGX0 51 aa8.88□□□□□ -0.99
CHMP4C-201ENST00000297265 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
CHMP4C-201ENST00000297265 TEX49A0A1B0GTD5 131 aa8.87□□□□□ -0.99
CHMP4C-201ENST00000297265 VPREB1P12018 145 aa8.86□□□□□ -0.99
CHMP4C-201ENST00000297265 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
CHMP4C-201ENST00000297265 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
CHMP4C-201ENST00000297265 RMI2Q96E14 147 aa8.85□□□□□ -0.99
CHMP4C-201ENST00000297265 VPS25Q9BRG1 176 aa8.85□□□□□ -0.99
CHMP4C-201ENST00000297265 VPS13DQ5THJ4 4388 aa8.84□□□□□ -0.99
CHMP4C-201ENST00000297265 J3QR89 54 aa8.84□□□□□ -0.99
CHMP4C-201ENST00000297265 LECT2O14960 151 aa8.84□□□□□ -0.99
CHMP4C-201ENST00000297265 GAGE2EQ4V326 116 aa8.84□□□□□ -0.99
CHMP4C-201ENST00000297265 GAGE2DQ9UEU5 116 aa8.84□□□□□ -0.99
CHMP4C-201ENST00000297265 NUPR2A6NF83 97 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 C6orf99Q4VX62 202 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 TRBV10-3A0A0K0K1G6 114 aa8.83□□□□□ -1
CHMP4C-201ENST00000297265 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
CHMP4C-201ENST00000297265 LINC00167Q96N53 147 aa8.81□□□□□ -1
CHMP4C-201ENST00000297265 CDIP1Q9H305 208 aa8.8□□□□□ -1
CHMP4C-201ENST00000297265 Q8N814 137 aa8.79□□□□□ -1
CHMP4C-201ENST00000297265 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
CHMP4C-201ENST00000297265 KRTAP7-1Q8IUC3 87 aa8.79□□□□□ -1
CHMP4C-201ENST00000297265 A0A1B0GX51 115 aa8.78□□□□□ -1
CHMP4C-201ENST00000297265 M0R378 163 aa8.78□□□□□ -1
CHMP4C-201ENST00000297265 LINC00575Q6W349 94 aa8.78□□□□□ -1
CHMP4C-201ENST00000297265 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
CHMP4C-201ENST00000297265 KMT2AQ03164 3969 aa8.77□□□□□ -1.01
CHMP4C-201ENST00000297265 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
CHMP4C-201ENST00000297265 DNAL4O96015 105 aa8.77□□□□□ -1.01
CHMP4C-201ENST00000297265 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
CHMP4C-201ENST00000297265 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
CHMP4C-201ENST00000297265 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
CHMP4C-201ENST00000297265 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
CHMP4C-201ENST00000297265 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
CHMP4C-201ENST00000297265 OBSCN-AS1Q96MR7 158 aa8.74□□□□□ -1.01
CHMP4C-201ENST00000297265 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
CHMP4C-201ENST00000297265 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
CHMP4C-201ENST00000297265 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 PSCAO43653 123 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 DIRC1Q969H9 104 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 ELOF1P60002 83 aaKnown RBP8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
CHMP4C-201ENST00000297265 TRBV7-6A0A0J9YX20 115 aa8.71□□□□□ -1.01
CHMP4C-201ENST00000297265 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.01
CHMP4C-201ENST00000297265 hADV29S1A0JD25 119 aa8.71□□□□□ -1.01
CHMP4C-201ENST00000297265 KCNQ1DNQ9H478 68 aa8.71□□□□□ -1.01
CHMP4C-201ENST00000297265 TGP01266 2768 aa8.71□□□□□ -1.02
CHMP4C-201ENST00000297265 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
CHMP4C-201ENST00000297265 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
CHMP4C-201ENST00000297265 XGP55808 180 aa8.69□□□□□ -1.02
CHMP4C-201ENST00000297265 LINC00528Q8N1L1 170 aa8.69□□□□□ -1.02
CHMP4C-201ENST00000297265 SIGMAR1Q99720 223 aa8.69□□□□□ -1.02
CHMP4C-201ENST00000297265 COX7BP24311 80 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 A0A096LNI7 61 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 FAM240AA0A1B0GVK7 77 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 TMEM256-PLSCR3K7ERE1 68 aa8.68□□□□□ -1.02
CHMP4C-201ENST00000297265 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.67□□□□□ -1.02
CHMP4C-201ENST00000297265 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
CHMP4C-201ENST00000297265 M0R2N4 97 aa8.67□□□□□ -1.02
CHMP4C-201ENST00000297265 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 Q6ZQY7 126 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 RPL37AP8A6NKH3 93 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms