RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 H3BT86 120 aa6.33□□□□□ -1.4
PRDM9-201ENST00000296682 LINC01561Q8N1V8 128 aa6.33□□□□□ -1.4
PRDM9-201ENST00000296682 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
PRDM9-201ENST00000296682 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
PRDM9-201ENST00000296682 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
PRDM9-201ENST00000296682 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
PRDM9-201ENST00000296682 IGKV3D-7A0A0C4DH55 119 aa6.3□□□□□ -1.4
PRDM9-201ENST00000296682 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
PRDM9-201ENST00000296682 DPH3Q96FX2 82 aa6.3□□□□□ -1.4
PRDM9-201ENST00000296682 H0YGX0 51 aa6.29□□□□□ -1.4
PRDM9-201ENST00000296682 RPL28P46779 137 aaKnown RBP6.29□□□□□ -1.4
PRDM9-201ENST00000296682 UBE2DNLQ8IWF7 75 aa6.29□□□□□ -1.4
PRDM9-201ENST00000296682 B5MCH6 92 aa6.29□□□□□ -1.4
PRDM9-201ENST00000296682 KIAA0087Q14695 138 aa6.29□□□□□ -1.4
PRDM9-201ENST00000296682 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
PRDM9-201ENST00000296682 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
PRDM9-201ENST00000296682 HIST1H4AP62805 103 aaKnown RBP6.28□□□□□ -1.4
PRDM9-201ENST00000296682 ANK2Q01484 3957 aa6.28□□□□□ -1.4
PRDM9-201ENST00000296682 PSCAO43653 123 aa6.28□□□□□ -1.4
PRDM9-201ENST00000296682 CXCL5P42830 114 aa6.28□□□□□ -1.4
PRDM9-201ENST00000296682 Q6ZRU5 148 aa6.28□□□□□ -1.4
PRDM9-201ENST00000296682 TRACP01848 142 aa6.27□□□□□ -1.41
PRDM9-201ENST00000296682 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
PRDM9-201ENST00000296682 C6orf48Q9UBA6 75 aa6.27□□□□□ -1.41
PRDM9-201ENST00000296682 SDIM1Q6ZPB5 146 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
PRDM9-201ENST00000296682 IGKV2-24A0A0C4DH68 120 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 RPL37AP8A6NKH3 93 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 Q8NDZ9 215 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 INAFM2P0DMQ5 153 aa6.26□□□□□ -1.41
PRDM9-201ENST00000296682 Q6ZQY7 126 aa6.25□□□□□ -1.41
PRDM9-201ENST00000296682 NKAPP1Q8N9T2 125 aa6.25□□□□□ -1.41
PRDM9-201ENST00000296682 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
PRDM9-201ENST00000296682 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
PRDM9-201ENST00000296682 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
PRDM9-201ENST00000296682 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
PRDM9-201ENST00000296682 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
PRDM9-201ENST00000296682 CASC10Q5T4H9 136 aa6.23□□□□□ -1.41
PRDM9-201ENST00000296682 K7EIL1 84 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 HAMPP81172 84 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 Q8N814 137 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 M0R2N4 97 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 DIRC1Q969H9 104 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 C22orf24Q9Y442 160 aa6.22□□□□□ -1.41
PRDM9-201ENST00000296682 COX17Q14061 63 aa6.21□□□□□ -1.41
PRDM9-201ENST00000296682 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.41
PRDM9-201ENST00000296682 FAM240AA0A1B0GVK7 77 aa6.21□□□□□ -1.42
PRDM9-201ENST00000296682 TRAV23DV6A0A075B6W5 121 aa6.21□□□□□ -1.42
PRDM9-201ENST00000296682 MDFIQ99750 246 aa6.21□□□□□ -1.42
PRDM9-201ENST00000296682 PRR34Q9NV39 138 aa6.21□□□□□ -1.42
PRDM9-201ENST00000296682 LINC00588Q9Y4M8 146 aa6.21□□□□□ -1.42
PRDM9-201ENST00000296682 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
PRDM9-201ENST00000296682 DYNC2H1Q8NCM8 4307 aaKnown RBP6.2□□□□□ -1.42
PRDM9-201ENST00000296682 A0A087WVE0 104 aa6.2□□□□□ -1.42
PRDM9-201ENST00000296682 OBSCN-AS1Q96MR7 158 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
PRDM9-201ENST00000296682 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
PRDM9-201ENST00000296682 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 TMEM256-PLSCR3K7ERE1 68 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 COX7BP24311 80 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 Q6ZRP5 223 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
PRDM9-201ENST00000296682 SMCR5Q8TEV8 140 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 RBM3P98179 157 aaKnown RBP6.18□□□□□ -1.42
PRDM9-201ENST00000296682 EGFEM1PQ0D2K5 195 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 MUC7Q8TAX7 377 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 DSCR8Q96T75 97 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 FAM168BA1KXE4 195 aa6.18□□□□□ -1.42
PRDM9-201ENST00000296682 Q6Q795 121 aa6.17□□□□□ -1.42
PRDM9-201ENST00000296682 C15orf56Q8N910 161 aa6.17□□□□□ -1.42
PRDM9-201ENST00000296682 NDUFC2-KCTD14E9PQ53 114 aa6.17□□□□□ -1.42
PRDM9-201ENST00000296682 H3BNG1 76 aa6.17□□□□□ -1.42
PRDM9-201ENST00000296682 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 NDUFC2O95298 119 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 UBE2BP63146 152 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 ACYP1P07311 99 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 LINC00575Q6W349 94 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 LINC00643Q86TS7 51 aa6.16□□□□□ -1.42
PRDM9-201ENST00000296682 FUSP35637 526 aaKnown RBP eCLIP6.15□□□□□ -1.42
PRDM9-201ENST00000296682 C3orf22Q8N5N4 141 aa6.15□□□□□ -1.43
PRDM9-201ENST00000296682 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
PRDM9-201ENST00000296682 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
PRDM9-201ENST00000296682 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
PRDM9-201ENST00000296682 M0R378 163 aa6.14□□□□□ -1.43
PRDM9-201ENST00000296682 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
PRDM9-201ENST00000296682 A0A096LNI7 61 aa6.13□□□□□ -1.43
PRDM9-201ENST00000296682 JMJD7-PLA2G4BH0Y9G9 81 aa6.13□□□□□ -1.43
PRDM9-201ENST00000296682 NHLRC4P0CG21 123 aaPredicted RBP6.13□□□□□ -1.43
PRDM9-201ENST00000296682 RMI2Q96E14 147 aa6.13□□□□□ -1.43
PRDM9-201ENST00000296682 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
PRDM9-201ENST00000296682 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
PRDM9-201ENST00000296682 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
PRDM9-201ENST00000296682 A0A1B0GX51 115 aa6.11□□□□□ -1.43
PRDM9-201ENST00000296682 VPREB1P12018 145 aa6.11□□□□□ -1.43
PRDM9-201ENST00000296682 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
PRDM9-201ENST00000296682 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms