RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 A0A1B0GUV1 79 aa11.21□□□□□ -0.62
SSRP1-202ENST00000293880 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
SSRP1-202ENST00000293880 TLN1Q9Y490 2541 aaKnown RBP11.17□□□□□ -0.62
SSRP1-202ENST00000293880 C16orf95Q9H693 158 aa11.17□□□□□ -0.62
SSRP1-202ENST00000293880 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
SSRP1-202ENST00000293880 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
SSRP1-202ENST00000293880 LINC00167Q96N53 147 aa11.16□□□□□ -0.62
SSRP1-202ENST00000293880 ST20-AS1Q8NBB2 130 aa11.16□□□□□ -0.62
SSRP1-202ENST00000293880 CENPFP49454 3210 aa11.15□□□□□ -0.62
SSRP1-202ENST00000293880 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
SSRP1-202ENST00000293880 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.63
SSRP1-202ENST00000293880 C10orf142B7Z368 130 aa11.14□□□□□ -0.63
SSRP1-202ENST00000293880 AGRNO00468 2067 aa11.14□□□□□ -0.63
SSRP1-202ENST00000293880 KIF25-AS1Q9Y6Z4 181 aa11.14□□□□□ -0.63
SSRP1-202ENST00000293880 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
SSRP1-202ENST00000293880 LINC01546A6NGU7 62 aa11.13□□□□□ -0.63
SSRP1-202ENST00000293880 DOPEY1Q5JWR5 2465 aa11.12□□□□□ -0.63
SSRP1-202ENST00000293880 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
SSRP1-202ENST00000293880 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
SSRP1-202ENST00000293880 APLNQ9ULZ1 77 aa11.11□□□□□ -0.63
SSRP1-202ENST00000293880 F8WDY8 70 aa11.11□□□□□ -0.63
SSRP1-202ENST00000293880 FHL3Q13643 280 aa11.11□□□□□ -0.63
SSRP1-202ENST00000293880 CHD8Q9HCK8 2581 aa11.11□□□□□ -0.63
SSRP1-202ENST00000293880 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
SSRP1-202ENST00000293880 Q6ZQT0 140 aa11.1□□□□□ -0.63
SSRP1-202ENST00000293880 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
SSRP1-202ENST00000293880 LINC00476Q8WZB0 136 aa11.09□□□□□ -0.63
SSRP1-202ENST00000293880 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
SSRP1-202ENST00000293880 CEP295Q9C0D2 2601 aa11.07□□□□□ -0.64
SSRP1-202ENST00000293880 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
SSRP1-202ENST00000293880 CD164Q04900 197 aa11.07□□□□□ -0.64
SSRP1-202ENST00000293880 COA5Q86WW8 74 aa11.06□□□□□ -0.64
SSRP1-202ENST00000293880 ANKRD11Q6UB99 2663 aaPredicted RBP11.06□□□□□ -0.64
SSRP1-202ENST00000293880 ZNF462Q96JM2 2506 aa11.05□□□□□ -0.64
SSRP1-202ENST00000293880 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
SSRP1-202ENST00000293880 LINC00315P59091 139 aa11.04□□□□□ -0.64
SSRP1-202ENST00000293880 MYO9AB2RTY4 2548 aa11.04□□□□□ -0.64
SSRP1-202ENST00000293880 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
SSRP1-202ENST00000293880 LINC00313P59037 77 aa11.04□□□□□ -0.64
SSRP1-202ENST00000293880 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
SSRP1-202ENST00000293880 TP53AIP1Q9HCN2 124 aa11.02□□□□□ -0.64
SSRP1-202ENST00000293880 Q96NJ1 140 aa11.02□□□□□ -0.65
SSRP1-202ENST00000293880 ABCA12Q86UK0 2595 aa11.02□□□□□ -0.65
SSRP1-202ENST00000293880 TRAV22A0A0B4J277 110 aa11.01□□□□□ -0.65
SSRP1-202ENST00000293880 TLN2Q9Y4G6 2542 aa11.01□□□□□ -0.65
SSRP1-202ENST00000293880 CRIPTQ9P021 101 aa11□□□□□ -0.65
SSRP1-202ENST00000293880 LRRK2Q5S007 2527 aa10.99□□□□□ -0.65
SSRP1-202ENST00000293880 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
SSRP1-202ENST00000293880 Q6ZRX8 168 aa10.98□□□□□ -0.65
SSRP1-202ENST00000293880 RTL8CO15255 209 aa10.97□□□□□ -0.65
SSRP1-202ENST00000293880 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
SSRP1-202ENST00000293880 TET2Q6N021 2002 aaPredicted RBP10.97□□□□□ -0.65
SSRP1-202ENST00000293880 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.65
SSRP1-202ENST00000293880 K7EQZ3 153 aa10.96□□□□□ -0.66
SSRP1-202ENST00000293880 C2CD3Q4AC94 2353 aa10.95□□□□□ -0.66
SSRP1-202ENST00000293880 COL27A1Q8IZC6 1860 aaPredicted RBP10.95□□□□□ -0.66
SSRP1-202ENST00000293880 TRBV7-4A0A0J9YYF1 115 aa10.94□□□□□ -0.66
SSRP1-202ENST00000293880 UQCR11O14957 56 aa10.94□□□□□ -0.66
SSRP1-202ENST00000293880 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
SSRP1-202ENST00000293880 LCA10Q71F78 164 aa10.94□□□□□ -0.66
SSRP1-202ENST00000293880 TYMSOSQ8TAI1 123 aa10.94□□□□□ -0.66
SSRP1-202ENST00000293880 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
SSRP1-202ENST00000293880 UTRNP46939 3433 aa10.93□□□□□ -0.66
SSRP1-202ENST00000293880 FN1P02751 2386 aaKnown RBP10.93□□□□□ -0.66
SSRP1-202ENST00000293880 BCE1O60756 84 aa10.93□□□□□ -0.66
SSRP1-202ENST00000293880 Q8NBF4 154 aa10.92□□□□□ -0.66
SSRP1-202ENST00000293880 PTPRBP23467 1997 aa10.92□□□□□ -0.66
SSRP1-202ENST00000293880 IGLV5-45A0A087WSX0 123 aa10.92□□□□□ -0.66
SSRP1-202ENST00000293880 Q6ZRP5 223 aa10.91□□□□□ -0.66
SSRP1-202ENST00000293880 LOC101927531A0A1B0GV80 90 aa10.9□□□□□ -0.66
SSRP1-202ENST00000293880 WIPF1O43516 503 aa10.89□□□□□ -0.67
SSRP1-202ENST00000293880 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
SSRP1-202ENST00000293880 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
SSRP1-202ENST00000293880 CYP4F30PQ9H0H9 118 aa10.89□□□□□ -0.67
SSRP1-202ENST00000293880 H3BS24 57 aa10.89□□□□□ -0.67
SSRP1-202ENST00000293880 USP9XQ93008 2570 aaPredicted RBP10.88□□□□□ -0.67
SSRP1-202ENST00000293880 DSCR10P59022 87 aa10.87□□□□□ -0.67
SSRP1-202ENST00000293880 H3BPC8 53 aa10.87□□□□□ -0.67
SSRP1-202ENST00000293880 IGLV6-57P01721 117 aa10.87□□□□□ -0.67
SSRP1-202ENST00000293880 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
SSRP1-202ENST00000293880 LITAFQ99732 161 aa10.86□□□□□ -0.67
SSRP1-202ENST00000293880 A0A0D9SG42 100 aa10.86□□□□□ -0.67
SSRP1-202ENST00000293880 SETD2Q9BYW2 2564 aaPredicted RBP10.85□□□□□ -0.67
SSRP1-202ENST00000293880 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
SSRP1-202ENST00000293880 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
SSRP1-202ENST00000293880 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
SSRP1-202ENST00000293880 A8MWP4 228 aa10.82□□□□□ -0.68
SSRP1-202ENST00000293880 LINC01554Q52M75 96 aa10.81□□□□□ -0.68
SSRP1-202ENST00000293880 NBDYA0A0U1RRE5 68 aa10.79□□□□□ -0.68
SSRP1-202ENST00000293880 COL4A2P08572 1712 aa10.78□□□□□ -0.68
SSRP1-202ENST00000293880 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
SSRP1-202ENST00000293880 MRPL34Q9BQ48 92 aaKnown RBP10.78□□□□□ -0.68
SSRP1-202ENST00000293880 Q8NAQ8 132 aa10.77□□□□□ -0.69
SSRP1-202ENST00000293880 GVQW2A0A096LPI5 108 aaPredicted RBP10.76□□□□□ -0.69
SSRP1-202ENST00000293880 EIF4EBP3O60516 100 aaPredicted RBP10.76□□□□□ -0.69
SSRP1-202ENST00000293880 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
SSRP1-202ENST00000293880 POLQO75417 2590 aa10.75□□□□□ -0.69
SSRP1-202ENST00000293880 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
SSRP1-202ENST00000293880 IGFL1Q6UW32 110 aa10.74□□□□□ -0.69
SSRP1-202ENST00000293880 H7BZZ5 65 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms