RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
SEC16A-202ENST00000290037 A0A087WSZ3 146 aa10.24□□□□□ -0.77
SEC16A-202ENST00000290037 TRAV22A0A0B4J277 110 aa10.24□□□□□ -0.77
SEC16A-202ENST00000290037 Q6ZRP5 223 aa10.23□□□□□ -0.77
SEC16A-202ENST00000290037 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
SEC16A-202ENST00000290037 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
SEC16A-202ENST00000290037 IGHV6-1A0A0B4J1U7 121 aa10.22□□□□□ -0.77
SEC16A-202ENST00000290037 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
SEC16A-202ENST00000290037 FAM229AH3BQW9 127 aa10.2□□□□□ -0.78
SEC16A-202ENST00000290037 Q6ZRU5 148 aa10.2□□□□□ -0.78
SEC16A-202ENST00000290037 Q6ZSN1 163 aa10.2□□□□□ -0.78
SEC16A-202ENST00000290037 ZNF462Q96JM2 2506 aa10.19□□□□□ -0.78
SEC16A-202ENST00000290037 A0A096LNI7 61 aa10.18□□□□□ -0.78
SEC16A-202ENST00000290037 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
SEC16A-202ENST00000290037 KLKP1Q107X0 134 aa10.18□□□□□ -0.78
SEC16A-202ENST00000290037 CIRBP-AS1Q8TBR5 109 aa10.18□□□□□ -0.78
SEC16A-202ENST00000290037 TLX1NBP0CAT3 122 aa10.16□□□□□ -0.78
SEC16A-202ENST00000290037 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
SEC16A-202ENST00000290037 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
SEC16A-202ENST00000290037 FASNP49327 2511 aaKnown RBP10.16□□□□□ -0.78
SEC16A-202ENST00000290037 CDSNQ15517 529 aa10.15□□□□□ -0.78
SEC16A-202ENST00000290037 SMCR5Q8TEV8 140 aa10.15□□□□□ -0.78
SEC16A-202ENST00000290037 A8MWP4 228 aa10.15□□□□□ -0.79
SEC16A-202ENST00000290037 LY6G6CO95867 125 aa10.15□□□□□ -0.79
SEC16A-202ENST00000290037 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
SEC16A-202ENST00000290037 LRCOL1A6NCL2 159 aa10.14□□□□□ -0.79
SEC16A-202ENST00000290037 EDN2P20800 178 aa10.14□□□□□ -0.79
SEC16A-202ENST00000290037 A0A1W2PPR1 153 aa10.13□□□□□ -0.79
SEC16A-202ENST00000290037 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
SEC16A-202ENST00000290037 A0A1B0GU69 56 aa10.12□□□□□ -0.79
SEC16A-202ENST00000290037 A0A087WVE0 104 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 SPANXA2-OT1Q8N9U9 137 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 LITAFQ99732 161 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 Q8NAQ8 132 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 X6R8D5 127 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 PRB2P02812 416 aaPredicted RBP10.11□□□□□ -0.79
SEC16A-202ENST00000290037 LINC00612Q8N6U2 182 aa10.11□□□□□ -0.79
SEC16A-202ENST00000290037 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
SEC16A-202ENST00000290037 PRR34Q9NV39 138 aa10.1□□□□□ -0.79
SEC16A-202ENST00000290037 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
SEC16A-202ENST00000290037 ACANP16112 2415 aa10.1□□□□□ -0.79
SEC16A-202ENST00000290037 PRR3P79522 188 aaKnown RBP10.08□□□□□ -0.8
SEC16A-202ENST00000290037 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
SEC16A-202ENST00000290037 SMIM29Q86T20 159 aa10.06□□□□□ -0.8
SEC16A-202ENST00000290037 LINC00313P59037 77 aa10.05□□□□□ -0.8
SEC16A-202ENST00000290037 LINC00476Q8WZB0 136 aa10.05□□□□□ -0.8
SEC16A-202ENST00000290037 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
SEC16A-202ENST00000290037 C7orf65Q6ZTY9 151 aa10.03□□□□□ -0.8
SEC16A-202ENST00000290037 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
SEC16A-202ENST00000290037 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
SEC16A-202ENST00000290037 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
SEC16A-202ENST00000290037 RETNLBQ9BQ08 111 aa10.01□□□□□ -0.81
SEC16A-202ENST00000290037 PRLHP81277 87 aa10.01□□□□□ -0.81
SEC16A-202ENST00000290037 PRM2P04554 102 aa10□□□□□ -0.81
SEC16A-202ENST00000290037 MDFIQ99750 246 aa10□□□□□ -0.81
SEC16A-202ENST00000290037 IGLV5-37A0A075B6J1 123 aa9.98□□□□□ -0.81
SEC16A-202ENST00000290037 FAM218AQ96MZ4 157 aa9.98□□□□□ -0.81
SEC16A-202ENST00000290037 POLQO75417 2590 aa9.98□□□□□ -0.81
SEC16A-202ENST00000290037 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
SEC16A-202ENST00000290037 PSPHP1O15172 72 aa9.97□□□□□ -0.81
SEC16A-202ENST00000290037 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.81
SEC16A-202ENST00000290037 PRR4Q16378 134 aa9.96□□□□□ -0.81
SEC16A-202ENST00000290037 CD164Q04900 197 aa9.96□□□□□ -0.82
SEC16A-202ENST00000290037 M0R2N4 97 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 KRTAP10-9P60411 292 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 RETNQ9HD89 108 aa9.95□□□□□ -0.82
SEC16A-202ENST00000290037 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
SEC16A-202ENST00000290037 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
SEC16A-202ENST00000290037 UQCR11O14957 56 aa9.94□□□□□ -0.82
SEC16A-202ENST00000290037 KMT2BQ9UMN6 2715 aaPredicted RBP9.94□□□□□ -0.82
SEC16A-202ENST00000290037 OBSCN-AS1Q96MR7 158 aa9.93□□□□□ -0.82
SEC16A-202ENST00000290037 PCOTHQ58A44 107 aa9.91□□□□□ -0.82
SEC16A-202ENST00000290037 EPG5Q9HCE0 2579 aa9.91□□□□□ -0.82
SEC16A-202ENST00000290037 A8MUN3 132 aa9.91□□□□□ -0.82
SEC16A-202ENST00000290037 PRRC2CQ9Y520 2896 aaKnown RBP9.9□□□□□ -0.82
SEC16A-202ENST00000290037 RTL8CO15255 209 aa9.9□□□□□ -0.82
SEC16A-202ENST00000290037 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
SEC16A-202ENST00000290037 LINC00588Q9Y4M8 146 aa9.89□□□□□ -0.83
SEC16A-202ENST00000290037 CR1P17927 2039 aa9.88□□□□□ -0.83
SEC16A-202ENST00000290037 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
SEC16A-202ENST00000290037 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
SEC16A-202ENST00000290037 USP24Q9UPU5 2620 aa9.87□□□□□ -0.83
SEC16A-202ENST00000290037 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
SEC16A-202ENST00000290037 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
SEC16A-202ENST00000290037 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
SEC16A-202ENST00000290037 FLNAP21333 2647 aaKnown RBP9.86□□□□□ -0.83
SEC16A-202ENST00000290037 ZNF861PO60384 105 aa9.85□□□□□ -0.83
SEC16A-202ENST00000290037 WWC2-AS2Q96NR7 200 aa9.85□□□□□ -0.83
SEC16A-202ENST00000290037 C15orf56Q8N910 161 aa9.85□□□□□ -0.83
SEC16A-202ENST00000290037 IGLV5-48A0A075B6I7 105 aa9.84□□□□□ -0.83
SEC16A-202ENST00000290037 TM2D3Q9BRN9 247 aa9.84□□□□□ -0.83
SEC16A-202ENST00000290037 EP400Q96L91 3159 aa9.84□□□□□ -0.83
SEC16A-202ENST00000290037 LINC00336Q6ZUF6 198 aa9.84□□□□□ -0.83
SEC16A-202ENST00000290037 WIPF1O43516 503 aa9.84□□□□□ -0.83
SEC16A-202ENST00000290037 A0A096LNT2 108 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms