RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 TRACP01848 142 aa12.91□□□□□ -0.34
BRAF-201ENST00000288602 BAALC-AS2P0C853 105 aa12.9□□□□□ -0.34
BRAF-201ENST00000288602 C15orf53Q8NAA6 179 aa12.9□□□□□ -0.34
BRAF-201ENST00000288602 TTC32Q5I0X7 151 aa12.89□□□□□ -0.35
BRAF-201ENST00000288602 KRTAP26-1Q6PEX3 210 aa12.89□□□□□ -0.35
BRAF-201ENST00000288602 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
BRAF-201ENST00000288602 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
BRAF-201ENST00000288602 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
BRAF-201ENST00000288602 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
BRAF-201ENST00000288602 LECT2O14960 151 aa12.86□□□□□ -0.35
BRAF-201ENST00000288602 ZNF561-AS1K7EIQ3 104 aa12.86□□□□□ -0.35
BRAF-201ENST00000288602 NDUFC2O95298 119 aa12.86□□□□□ -0.35
BRAF-201ENST00000288602 XAGE1AQ9HD64 81 aa12.86□□□□□ -0.35
BRAF-201ENST00000288602 IGKV2D-24A0A075B6R9 120 aa12.85□□□□□ -0.35
BRAF-201ENST00000288602 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
BRAF-201ENST00000288602 H0YGX0 51 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 DNAL4O96015 105 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 SLPIP03973 132 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 Q6Q795 121 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 LYSTQ99698 3801 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 TRAV10A0A0B4J240 114 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 C1orf43Q9BWL3 253 aa12.84□□□□□ -0.35
BRAF-201ENST00000288602 CAMK2N2Q96S95 79 aa12.83□□□□□ -0.36
BRAF-201ENST00000288602 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
BRAF-201ENST00000288602 MDFIQ99750 246 aa12.82□□□□□ -0.36
BRAF-201ENST00000288602 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
BRAF-201ENST00000288602 S100A7L2Q5SY68 101 aa12.81□□□□□ -0.36
BRAF-201ENST00000288602 Q6ZRU5 148 aa12.81□□□□□ -0.36
BRAF-201ENST00000288602 RPL18AQ02543 176 aaKnown RBP12.81□□□□□ -0.36
BRAF-201ENST00000288602 GVQW2A0A096LPI5 108 aaPredicted RBP12.8□□□□□ -0.36
BRAF-201ENST00000288602 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
BRAF-201ENST00000288602 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
BRAF-201ENST00000288602 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
BRAF-201ENST00000288602 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
BRAF-201ENST00000288602 MUC7Q8TAX7 377 aa12.74□□□□□ -0.37
BRAF-201ENST00000288602 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
BRAF-201ENST00000288602 FAM240AA0A1B0GVK7 77 aa12.72□□□□□ -0.37
BRAF-201ENST00000288602 Q8N814 137 aa12.72□□□□□ -0.37
BRAF-201ENST00000288602 TRBV10-3A0A0K0K1G6 114 aa12.71□□□□□ -0.37
BRAF-201ENST00000288602 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
BRAF-201ENST00000288602 DNAH1Q9P2D7 4330 aa12.71□□□□□ -0.38
BRAF-201ENST00000288602 C2orf48Q96LS8 159 aa12.7□□□□□ -0.38
BRAF-201ENST00000288602 ORMDL1Q9P0S3 153 aa12.7□□□□□ -0.38
BRAF-201ENST00000288602 Q6ZRP5 223 aa12.7□□□□□ -0.38
BRAF-201ENST00000288602 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
BRAF-201ENST00000288602 DNAH9Q9NYC9 4486 aa12.69□□□□□ -0.38
BRAF-201ENST00000288602 SMIM20Q8N5G0 67 aa12.69□□□□□ -0.38
BRAF-201ENST00000288602 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
BRAF-201ENST00000288602 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
BRAF-201ENST00000288602 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
BRAF-201ENST00000288602 TRBV7-7A0A0K0K1E9 115 aa12.67□□□□□ -0.38
BRAF-201ENST00000288602 VPREB1P12018 145 aa12.66□□□□□ -0.38
BRAF-201ENST00000288602 INAFM2P0DMQ5 153 aa12.66□□□□□ -0.38
BRAF-201ENST00000288602 LINC00575Q6W349 94 aa12.65□□□□□ -0.38
BRAF-201ENST00000288602 LINC00167Q96N53 147 aa12.65□□□□□ -0.38
BRAF-201ENST00000288602 TRAV23DV6A0A075B6W5 121 aa12.65□□□□□ -0.38
BRAF-201ENST00000288602 CSMD3Q7Z407 3707 aa12.64□□□□□ -0.39
BRAF-201ENST00000288602 SMCR5Q8TEV8 140 aa12.64□□□□□ -0.39
BRAF-201ENST00000288602 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
BRAF-201ENST00000288602 FAM236AA0A1B0GUQ0 79 aa12.63□□□□□ -0.39
BRAF-201ENST00000288602 FAM236BA0A1B0GV22 79 aa12.63□□□□□ -0.39
BRAF-201ENST00000288602 A0A1B0GX51 115 aa12.62□□□□□ -0.39
BRAF-201ENST00000288602 DNAH7Q8WXX0 4024 aa12.62□□□□□ -0.39
BRAF-201ENST00000288602 DNAH10Q8IVF4 4471 aa12.62□□□□□ -0.39
BRAF-201ENST00000288602 TENM2Q9NT68 2774 aa12.62□□□□□ -0.39
BRAF-201ENST00000288602 OBSCN-AS1Q96MR7 158 aa12.62□□□□□ -0.39
BRAF-201ENST00000288602 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
BRAF-201ENST00000288602 ACYP1P07311 99 aa12.61□□□□□ -0.39
BRAF-201ENST00000288602 ZNF73O43830 326 aaPredicted RBP12.6□□□□□ -0.39
BRAF-201ENST00000288602 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
BRAF-201ENST00000288602 TMEM256-PLSCR3K7ERE1 68 aa12.59□□□□□ -0.39
BRAF-201ENST00000288602 UPK3BQ9BT76 320 aa12.59□□□□□ -0.39
BRAF-201ENST00000288602 M0R378 163 aa12.57□□□□□ -0.4
BRAF-201ENST00000288602 SERTAD4-AS1Q5TG53 156 aa12.57□□□□□ -0.4
BRAF-201ENST00000288602 KRTAP1-5Q9BYS1 174 aa12.57□□□□□ -0.4
BRAF-201ENST00000288602 IMUPQ9GZP8 106 aa12.56□□□□□ -0.4
BRAF-201ENST00000288602 Q6ZQY7 126 aa12.56□□□□□ -0.4
BRAF-201ENST00000288602 LINC00643Q86TS7 51 aa12.55□□□□□ -0.4
BRAF-201ENST00000288602 F8WDY8 70 aa12.55□□□□□ -0.4
BRAF-201ENST00000288602 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
BRAF-201ENST00000288602 COX7BP24311 80 aa12.53□□□□□ -0.4
BRAF-201ENST00000288602 RMI2Q96E14 147 aa12.53□□□□□ -0.4
BRAF-201ENST00000288602 B9D2Q9BPU9 175 aa12.53□□□□□ -0.4
BRAF-201ENST00000288602 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.41
BRAF-201ENST00000288602 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
BRAF-201ENST00000288602 LINC00846Q9NV44 126 aa12.51□□□□□ -0.41
BRAF-201ENST00000288602 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
BRAF-201ENST00000288602 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
BRAF-201ENST00000288602 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
BRAF-201ENST00000288602 JMJD7-PLA2G4BH0Y9G9 81 aa12.5□□□□□ -0.41
BRAF-201ENST00000288602 C9orf153Q5TBE3 101 aa12.5□□□□□ -0.41
BRAF-201ENST00000288602 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
BRAF-201ENST00000288602 LAMTOR3Q9UHA4 124 aa12.49□□□□□ -0.41
BRAF-201ENST00000288602 C3orf22Q8N5N4 141 aa12.49□□□□□ -0.41
BRAF-201ENST00000288602 PLECQ15149 4684 aaKnown RBP12.48□□□□□ -0.41
BRAF-201ENST00000288602 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
BRAF-201ENST00000288602 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
BRAF-201ENST00000288602 RPL37AP8A6NKH3 93 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms