RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
USP53-201ENST00000274030 TMEM254Q8TBM7 123 aa7.94□□□□□ -1.14
USP53-201ENST00000274030 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
USP53-201ENST00000274030 USP24Q9UPU5 2620 aa7.94□□□□□ -1.14
USP53-201ENST00000274030 FSHBP01225 129 aa7.94□□□□□ -1.14
USP53-201ENST00000274030 F8WDY8 70 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 LINC00167Q96N53 147 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 LINC01561Q8N1V8 128 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 FLNBO75369 2602 aaKnown RBP7.93□□□□□ -1.14
USP53-201ENST00000274030 CRYGAP11844 174 aa7.93□□□□□ -1.14
USP53-201ENST00000274030 SPACA4Q8TDM5 124 aa7.91□□□□□ -1.14
USP53-201ENST00000274030 SPATA3Q8NHX4 192 aa7.91□□□□□ -1.14
USP53-201ENST00000274030 FAM19A4Q96LR4 140 aa7.91□□□□□ -1.14
USP53-201ENST00000274030 MOBPQ13875 183 aa7.9□□□□□ -1.14
USP53-201ENST00000274030 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
USP53-201ENST00000274030 CDIP1Q9H305 208 aa7.9□□□□□ -1.14
USP53-201ENST00000274030 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.15
USP53-201ENST00000274030 PTPRBP23467 1997 aa7.89□□□□□ -1.15
USP53-201ENST00000274030 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
USP53-201ENST00000274030 NHLRC4P0CG21 123 aaPredicted RBP7.89□□□□□ -1.15
USP53-201ENST00000274030 PCNTO95613 3336 aa7.88□□□□□ -1.15
USP53-201ENST00000274030 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
USP53-201ENST00000274030 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
USP53-201ENST00000274030 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
USP53-201ENST00000274030 LINC01546A6NGU7 62 aa7.86□□□□□ -1.15
USP53-201ENST00000274030 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
USP53-201ENST00000274030 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
USP53-201ENST00000274030 DNAH12Q6ZR08 3092 aa7.85□□□□□ -1.15
USP53-201ENST00000274030 MGAM2Q2M2H8 2515 aa7.85□□□□□ -1.15
USP53-201ENST00000274030 CXCL6P80162 114 aa7.85□□□□□ -1.15
USP53-201ENST00000274030 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
USP53-201ENST00000274030 IGLV5-45A0A087WSX0 123 aa7.82□□□□□ -1.16
USP53-201ENST00000274030 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
USP53-201ENST00000274030 CEP350Q5VT06 3117 aa7.82□□□□□ -1.16
USP53-201ENST00000274030 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
USP53-201ENST00000274030 COL27A1Q8IZC6 1860 aaPredicted RBP7.81□□□□□ -1.16
USP53-201ENST00000274030 HECTD1Q9ULT8 2610 aa7.81□□□□□ -1.16
USP53-201ENST00000274030 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
USP53-201ENST00000274030 ELOF1P60002 83 aaKnown RBP7.8□□□□□ -1.16
USP53-201ENST00000274030 Q8NAQ8 132 aa7.8□□□□□ -1.16
USP53-201ENST00000274030 LINC00476Q8WZB0 136 aa7.8□□□□□ -1.16
USP53-201ENST00000274030 BPTFQ12830 3046 aa7.8□□□□□ -1.16
USP53-201ENST00000274030 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
USP53-201ENST00000274030 RPL37AP61513 92 aaKnown RBP7.79□□□□□ -1.16
USP53-201ENST00000274030 RTL8CO15255 209 aa7.79□□□□□ -1.16
USP53-201ENST00000274030 Q6ZRX8 168 aa7.78□□□□□ -1.16
USP53-201ENST00000274030 ATRQ13535 2644 aa7.78□□□□□ -1.16
USP53-201ENST00000274030 PRO0461Q9UI25 63 aa7.77□□□□□ -1.16
USP53-201ENST00000274030 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
USP53-201ENST00000274030 Q6ZQT0 140 aa7.76□□□□□ -1.17
USP53-201ENST00000274030 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
USP53-201ENST00000274030 H3BNG1 76 aa7.76□□□□□ -1.17
USP53-201ENST00000274030 Q6ZRP5 223 aa7.76□□□□□ -1.17
USP53-201ENST00000274030 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
USP53-201ENST00000274030 Q8NBF4 154 aa7.75□□□□□ -1.17
USP53-201ENST00000274030 COL4A2P08572 1712 aa7.75□□□□□ -1.17
USP53-201ENST00000274030 A0A1B0GU69 56 aa7.74□□□□□ -1.17
USP53-201ENST00000274030 C16orf90A8MZG2 172 aa7.73□□□□□ -1.17
USP53-201ENST00000274030 TYMSOSQ8TAI1 123 aa7.73□□□□□ -1.17
USP53-201ENST00000274030 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
USP53-201ENST00000274030 TM2D3Q9BRN9 247 aa7.73□□□□□ -1.17
USP53-201ENST00000274030 TP53AIP1Q9HCN2 124 aa7.71□□□□□ -1.17
USP53-201ENST00000274030 MAST4O15021 2626 aa7.71□□□□□ -1.18
USP53-201ENST00000274030 LINC00313P59037 77 aa7.71□□□□□ -1.18
USP53-201ENST00000274030 ACYP2P14621 99 aa7.7□□□□□ -1.18
USP53-201ENST00000274030 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
USP53-201ENST00000274030 LITAFQ99732 161 aa7.7□□□□□ -1.18
USP53-201ENST00000274030 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
USP53-201ENST00000274030 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
USP53-201ENST00000274030 VPREB1P12018 145 aa7.68□□□□□ -1.18
USP53-201ENST00000274030 LOC110117498A0A087WWA1 95 aa7.68□□□□□ -1.18
USP53-201ENST00000274030 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
USP53-201ENST00000274030 DNAH10OSP0CZ25 163 aa7.68□□□□□ -1.18
USP53-201ENST00000274030 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
USP53-201ENST00000274030 EIF4EBP3O60516 100 aaPredicted RBP7.68□□□□□ -1.18
USP53-201ENST00000274030 Q96NJ1 140 aa7.67□□□□□ -1.18
USP53-201ENST00000274030 BCE1O60756 84 aa7.67□□□□□ -1.18
USP53-201ENST00000274030 TRBV7-4A0A0J9YYF1 115 aa7.66□□□□□ -1.18
USP53-201ENST00000274030 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.19
USP53-201ENST00000274030 IGLV6-57P01721 117 aa7.65□□□□□ -1.19
USP53-201ENST00000274030 K7EQZ3 153 aa7.64□□□□□ -1.19
USP53-201ENST00000274030 PCSK5Q92824 1860 aa7.64□□□□□ -1.19
USP53-201ENST00000274030 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
USP53-201ENST00000274030 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
USP53-201ENST00000274030 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
USP53-201ENST00000274030 A0A1B0GW54 56 aa7.63□□□□□ -1.19
USP53-201ENST00000274030 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
USP53-201ENST00000274030 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
USP53-201ENST00000274030 WWC2-AS2Q96NR7 200 aa7.62□□□□□ -1.19
USP53-201ENST00000274030 K7EIL1 84 aa7.61□□□□□ -1.19
USP53-201ENST00000274030 KLK9Q2XQG4 91 aa7.61□□□□□ -1.19
USP53-201ENST00000274030 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
USP53-201ENST00000274030 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
USP53-201ENST00000274030 A8MWP4 228 aa7.59□□□□□ -1.2
USP53-201ENST00000274030 KRTAP10-3P60369 221 aa7.58□□□□□ -1.2
USP53-201ENST00000274030 GIG44P09565 113 aaPredicted RBP7.58□□□□□ -1.2
USP53-201ENST00000274030 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms