RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FAM229BQ4G0N7 80 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 C3orf22Q8N5N4 141 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 SCGB3A1Q96QR1 104 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 IGLV5-39A0A0G2JS06 123 aa5.12□□□□□ -1.59
TPM3-201ENST00000271850 M0R378 163 aa5.12□□□□□ -1.59
TPM3-201ENST00000271850 UBE2AP49459 152 aa5.12□□□□□ -1.59
TPM3-201ENST00000271850 PAPPA-AS1Q5QFB9 102 aa5.12□□□□□ -1.59
TPM3-201ENST00000271850 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
TPM3-201ENST00000271850 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
TPM3-201ENST00000271850 TMEM126AQ9H061 195 aa5.11□□□□□ -1.59
TPM3-201ENST00000271850 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 ZNF22P17026 224 aaPredicted RBP5.1□□□□□ -1.59
TPM3-201ENST00000271850 PMVKQ15126 192 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 PLEKHB2Q96CS7 222 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
TPM3-201ENST00000271850 PFN2P35080 140 aa5.09□□□□□ -1.59
TPM3-201ENST00000271850 FAM19A1Q7Z5A9 133 aa5.09□□□□□ -1.59
TPM3-201ENST00000271850 G0S2P27469 103 aa5.08□□□□□ -1.6
TPM3-201ENST00000271850 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
TPM3-201ENST00000271850 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
TPM3-201ENST00000271850 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
TPM3-201ENST00000271850 ERG28Q9UKR5 140 aa5.08□□□□□ -1.6
TPM3-201ENST00000271850 IGKV2D-26A0A0A0MRZ7 120 aa5.07□□□□□ -1.6
TPM3-201ENST00000271850 ATP5LO75964 103 aa5.07□□□□□ -1.6
TPM3-201ENST00000271850 GNB1LQ9BYB4 327 aa5.07□□□□□ -1.6
TPM3-201ENST00000271850 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 TMEM218A2RU14 115 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 C11orf86A6NJI1 115 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 KRTAP13-3Q3SY46 172 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 CLLU1Q5K131 121 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 SPRR4Q96PI1 79 aa5.06□□□□□ -1.6
TPM3-201ENST00000271850 RAB14P61106 215 aa5.05□□□□□ -1.6
TPM3-201ENST00000271850 CTAG1AP78358 180 aa5.05□□□□□ -1.6
TPM3-201ENST00000271850 IFITM2Q01629 132 aa5.05□□□□□ -1.6
TPM3-201ENST00000271850 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
TPM3-201ENST00000271850 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
TPM3-201ENST00000271850 H3BRM9 83 aa5.04□□□□□ -1.6
TPM3-201ENST00000271850 FA2HQ7L5A8 372 aa5.04□□□□□ -1.6
TPM3-201ENST00000271850 CBLN2Q8IUK8 224 aa5.04□□□□□ -1.6
TPM3-201ENST00000271850 DAND5Q8N907 189 aa5.04□□□□□ -1.6
TPM3-201ENST00000271850 HIGD2AQ9BW72 106 aa5.04□□□□□ -1.6
TPM3-201ENST00000271850 LINC01549A6NIU2 74 aa5.03□□□□□ -1.6
TPM3-201ENST00000271850 SPRR1AP35321 89 aa5.03□□□□□ -1.6
TPM3-201ENST00000271850 FABP9Q0Z7S8 132 aa5.03□□□□□ -1.6
TPM3-201ENST00000271850 COX17Q14061 63 aa5.03□□□□□ -1.6
TPM3-201ENST00000271850 C18orf32Q8TCD1 76 aa5.03□□□□□ -1.6
TPM3-201ENST00000271850 NDUFA6P56556 154 aa5.02□□□□□ -1.61
TPM3-201ENST00000271850 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
TPM3-201ENST00000271850 ASB16-AS1Q495Z4 193 aa5.02□□□□□ -1.61
TPM3-201ENST00000271850 Q8NBF4 154 aa5.02□□□□□ -1.61
TPM3-201ENST00000271850 SMCR5Q8TEV8 140 aa5.02□□□□□ -1.61
TPM3-201ENST00000271850 A0A0U1RRA0 63 aa5.01□□□□□ -1.61
TPM3-201ENST00000271850 C10orf91Q5T1B1 145 aa5.01□□□□□ -1.61
TPM3-201ENST00000271850 UQCC3Q6UW78 93 aa5.01□□□□□ -1.61
TPM3-201ENST00000271850 FP248Q71RG6 208 aaPredicted RBP5.01□□□□□ -1.61
TPM3-201ENST00000271850 SEC11CQ9BY50 192 aa5.01□□□□□ -1.61
TPM3-201ENST00000271850 SMCO4Q9NRQ5 59 aa5.01□□□□□ -1.61
TPM3-201ENST00000271850 TMEM223A0PJW6 202 aa5□□□□□ -1.61
TPM3-201ENST00000271850 HBDP02042 147 aa5□□□□□ -1.61
TPM3-201ENST00000271850 LINC00614P0C842 121 aa5□□□□□ -1.61
TPM3-201ENST00000271850 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
TPM3-201ENST00000271850 LINC00483Q53H64 154 aa5□□□□□ -1.61
TPM3-201ENST00000271850 SPAG11AQ6PDA7 123 aa5□□□□□ -1.61
TPM3-201ENST00000271850 BAGE3Q86Y29 109 aa5□□□□□ -1.61
TPM3-201ENST00000271850 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 NCR3O14931 201 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 SMIM13P0DJ93 91 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 S100PP25815 95 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 TMEM170BQ5T4T1 132 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
TPM3-201ENST00000271850 PRYO14603 147 aa4.98□□□□□ -1.61
TPM3-201ENST00000271850 LINC00158P58513 81 aa4.98□□□□□ -1.61
TPM3-201ENST00000271850 COX19Q49B96 90 aa4.98□□□□□ -1.61
TPM3-201ENST00000271850 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
TPM3-201ENST00000271850 TRBV10-3A0A0K0K1G6 114 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 TSPEAR-AS2P59090 65 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 Q8N377 158 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 MIR7-3HGQ8N6C7 128 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 Q9BRP9 147 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
TPM3-201ENST00000271850 TRAPPC1Q9Y5R8 145 aa4.97□□□□□ -1.61
TPM3-201ENST00000271850 B5MCH6 92 aa4.96□□□□□ -1.62
TPM3-201ENST00000271850 SFTA2Q6UW10 78 aa4.96□□□□□ -1.62
TPM3-201ENST00000271850 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
TPM3-201ENST00000271850 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
TPM3-201ENST00000271850 RPS10P5Q9NQ39 176 aa4.96□□□□□ -1.62
TPM3-201ENST00000271850 TRAV12-1A0A0B4J245 112 aa4.95□□□□□ -1.62
TPM3-201ENST00000271850 SPINK1P00995 79 aa4.95□□□□□ -1.62
TPM3-201ENST00000271850 MOBPQ13875 183 aa4.95□□□□□ -1.62
TPM3-201ENST00000271850 RHEBQ15382 184 aa4.95□□□□□ -1.62
TPM3-201ENST00000271850 YPEL4Q96NS1 127 aa4.95□□□□□ -1.62
TPM3-201ENST00000271850 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
TPM3-201ENST00000271850 GAGE2AQ6NT46 116 aa4.94□□□□□ -1.62
TPM3-201ENST00000271850 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
TPM3-201ENST00000271850 IFI27L1Q96BM0 104 aa4.93□□□□□ -1.62
TPM3-201ENST00000271850 LOC107984156A0A0G2JMH3 177 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms