RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CRYGAP11844 174 aa9.51□□□□□ -0.89
USE1-201ENST00000263897 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
USE1-201ENST00000263897 SERF1AO75920 110 aa9.5□□□□□ -0.89
USE1-201ENST00000263897 LINC00310P59036 64 aa9.5□□□□□ -0.89
USE1-201ENST00000263897 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
USE1-201ENST00000263897 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
USE1-201ENST00000263897 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
USE1-201ENST00000263897 COLCA2A8K830 154 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 H0Y8G0 127 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 M0R378 163 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 ATP6V1G1O75348 118 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 HERV-K104P63124 156 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 FAM19A1Q7Z5A9 133 aa9.48□□□□□ -0.89
USE1-201ENST00000263897 PRLHP81277 87 aa9.47□□□□□ -0.89
USE1-201ENST00000263897 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
USE1-201ENST00000263897 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
USE1-201ENST00000263897 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
USE1-201ENST00000263897 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
USE1-201ENST00000263897 LINC00587B1AMM8 73 aa9.45□□□□□ -0.9
USE1-201ENST00000263897 TSPAN13O95857 204 aa9.45□□□□□ -0.9
USE1-201ENST00000263897 FABP4P15090 132 aa9.45□□□□□ -0.9
USE1-201ENST00000263897 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
USE1-201ENST00000263897 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
USE1-201ENST00000263897 BOD1L2Q8IYS8 172 aa9.44□□□□□ -0.9
USE1-201ENST00000263897 MIR7-3HGQ8N6C7 128 aa9.44□□□□□ -0.9
USE1-201ENST00000263897 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
USE1-201ENST00000263897 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
USE1-201ENST00000263897 LEPROTO15243 131 aa9.43□□□□□ -0.9
USE1-201ENST00000263897 PLNP26678 52 aa9.43□□□□□ -0.9
USE1-201ENST00000263897 PRR4Q16378 134 aa9.43□□□□□ -0.9
USE1-201ENST00000263897 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
USE1-201ENST00000263897 MAP1LC3CQ9BXW4 147 aa9.42□□□□□ -0.9
USE1-201ENST00000263897 DPM2O94777 84 aa9.41□□□□□ -0.9
USE1-201ENST00000263897 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
USE1-201ENST00000263897 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.9
USE1-201ENST00000263897 IGKV2D-26A0A0A0MRZ7 120 aa9.39□□□□□ -0.91
USE1-201ENST00000263897 J3QQQ9 107 aa9.39□□□□□ -0.91
USE1-201ENST00000263897 IGKCP01834 107 aa9.39□□□□□ -0.91
USE1-201ENST00000263897 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
USE1-201ENST00000263897 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 PRYO14603 147 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 NCR3O14931 201 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 HERVK_113P61574 105 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 KCNQ1DNQ9H478 68 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 LPAP08519 4548 aa9.38□□□□□ -0.91
USE1-201ENST00000263897 SPRR1AP35321 89 aa9.36□□□□□ -0.91
USE1-201ENST00000263897 NMUP48645 174 aa9.36□□□□□ -0.91
USE1-201ENST00000263897 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
USE1-201ENST00000263897 DAND5Q8N907 189 aa9.36□□□□□ -0.91
USE1-201ENST00000263897 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
USE1-201ENST00000263897 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
USE1-201ENST00000263897 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
USE1-201ENST00000263897 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BKO60814 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BJP06899 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BOP23527 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BBP33778 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BDP58876 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BCP62807 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST2H2BEQ16778 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BHQ93079 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
USE1-201ENST00000263897 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
USE1-201ENST00000263897 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
USE1-201ENST00000263897 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
USE1-201ENST00000263897 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
USE1-201ENST00000263897 CTAG1AP78358 180 aa9.32□□□□□ -0.92
USE1-201ENST00000263897 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
USE1-201ENST00000263897 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
USE1-201ENST00000263897 S100A12P80511 92 aa9.31□□□□□ -0.92
USE1-201ENST00000263897 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
USE1-201ENST00000263897 E9PLD3 99 aa9.3□□□□□ -0.92
USE1-201ENST00000263897 DDTP30046 118 aa9.3□□□□□ -0.92
USE1-201ENST00000263897 MIEN1Q9BRT3 115 aa9.3□□□□□ -0.92
USE1-201ENST00000263897 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
USE1-201ENST00000263897 NDUFC2O95298 119 aa9.29□□□□□ -0.92
USE1-201ENST00000263897 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
USE1-201ENST00000263897 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
USE1-201ENST00000263897 B5MCH6 92 aa9.28□□□□□ -0.92
USE1-201ENST00000263897 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
USE1-201ENST00000263897 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
USE1-201ENST00000263897 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 SPAG11AQ6PDA7 123 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
USE1-201ENST00000263897 S100A7L2Q5SY68 101 aa9.25□□□□□ -0.93
USE1-201ENST00000263897 NPC2P61916 151 aa9.24□□□□□ -0.93
USE1-201ENST00000263897 ERC2-IT1O76042 136 aa9.23□□□□□ -0.93
USE1-201ENST00000263897 LINC00483Q53H64 154 aa9.23□□□□□ -0.93
USE1-201ENST00000263897 Q6ZRX8 168 aa9.23□□□□□ -0.93
USE1-201ENST00000263897 C3orf79P0CE67 100 aa9.22□□□□□ -0.93
USE1-201ENST00000263897 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
USE1-201ENST00000263897 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms