RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.41
MSH4-201ENST00000263187 FAM110AQ9BQ89 295 aa6.21□□□□□ -1.41
MSH4-201ENST00000263187 LAMTOR3Q9UHA4 124 aa6.21□□□□□ -1.41
MSH4-201ENST00000263187 M0R2N4 97 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 LINC01561Q8N1V8 128 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 PPDPFQ9H3Y8 114 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 LY6G6DO95868 133 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
MSH4-201ENST00000263187 TMEM126AQ9H061 195 aa6.2□□□□□ -1.42
MSH4-201ENST00000263187 UQCRQO14949 82 aa6.2□□□□□ -1.42
MSH4-201ENST00000263187 ANK2Q01484 3957 aa6.2□□□□□ -1.42
MSH4-201ENST00000263187 NBEAL1Q6ZS30 2694 aa6.19□□□□□ -1.42
MSH4-201ENST00000263187 LINC00612Q8N6U2 182 aa6.19□□□□□ -1.42
MSH4-201ENST00000263187 RETNQ9HD89 108 aa6.19□□□□□ -1.42
MSH4-201ENST00000263187 CCKP06307 115 aa6.19□□□□□ -1.42
MSH4-201ENST00000263187 COX7CP15954 63 aa6.19□□□□□ -1.42
MSH4-201ENST00000263187 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
MSH4-201ENST00000263187 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
MSH4-201ENST00000263187 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
MSH4-201ENST00000263187 COL6A5A8TX70 2615 aa6.18□□□□□ -1.42
MSH4-201ENST00000263187 Q6ZQY7 126 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 HAMPP81172 84 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 SCXQ7RTU7 201 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 TMEM256-PLSCR3K7ERE1 68 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 ATOX1O00244 68 aa6.17□□□□□ -1.42
MSH4-201ENST00000263187 TRBV10-3A0A0K0K1G6 114 aa6.16□□□□□ -1.42
MSH4-201ENST00000263187 Q6JHZ5 121 aa6.16□□□□□ -1.42
MSH4-201ENST00000263187 SMIM9A6NGZ8 99 aa6.15□□□□□ -1.42
MSH4-201ENST00000263187 C9orf66Q5T8R8 295 aa6.15□□□□□ -1.42
MSH4-201ENST00000263187 LINC00575Q6W349 94 aa6.15□□□□□ -1.42
MSH4-201ENST00000263187 WFDC10BQ8IUB3 73 aa6.15□□□□□ -1.42
MSH4-201ENST00000263187 Q8NAQ8 132 aa6.15□□□□□ -1.42
MSH4-201ENST00000263187 IGHV4-30-4P0DP06 118 aa6.15□□□□□ -1.43
MSH4-201ENST00000263187 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 APOC4P55056 127 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
MSH4-201ENST00000263187 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 GHRHP01286 108 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 OXLD1Q5BKU9 147 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 C6orf48Q9UBA6 75 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 COX17Q14061 63 aa6.14□□□□□ -1.43
MSH4-201ENST00000263187 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
MSH4-201ENST00000263187 NDUFC2O95298 119 aa6.13□□□□□ -1.43
MSH4-201ENST00000263187 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
MSH4-201ENST00000263187 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
MSH4-201ENST00000263187 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
MSH4-201ENST00000263187 LELP1Q5T871 98 aa6.12□□□□□ -1.43
MSH4-201ENST00000263187 LYPD5Q6UWN5 251 aa6.12□□□□□ -1.43
MSH4-201ENST00000263187 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
MSH4-201ENST00000263187 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
MSH4-201ENST00000263187 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
MSH4-201ENST00000263187 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
MSH4-201ENST00000263187 CRYGAP11844 174 aa6.1□□□□□ -1.43
MSH4-201ENST00000263187 Q6ZQT0 140 aa6.1□□□□□ -1.43
MSH4-201ENST00000263187 Q6ZTC4 211 aa6.1□□□□□ -1.43
MSH4-201ENST00000263187 MIFP14174 115 aa6.09□□□□□ -1.43
MSH4-201ENST00000263187 KPRPQ5T749 579 aaPredicted RBP6.09□□□□□ -1.43
MSH4-201ENST00000263187 Q6ZRU5 148 aa6.09□□□□□ -1.43
MSH4-201ENST00000263187 ZNF73O43830 326 aaPredicted RBP6.09□□□□□ -1.43
MSH4-201ENST00000263187 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
MSH4-201ENST00000263187 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
MSH4-201ENST00000263187 Q8N9L7 120 aa6.09□□□□□ -1.43
MSH4-201ENST00000263187 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
MSH4-201ENST00000263187 TRAV10A0A0B4J240 114 aa6.08□□□□□ -1.44
MSH4-201ENST00000263187 IGKV2D-24A0A075B6R9 120 aa6.08□□□□□ -1.44
MSH4-201ENST00000263187 Q6ZVQ6 151 aa6.08□□□□□ -1.44
MSH4-201ENST00000263187 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
MSH4-201ENST00000263187 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
MSH4-201ENST00000263187 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
MSH4-201ENST00000263187 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
MSH4-201ENST00000263187 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
MSH4-201ENST00000263187 PRB2P02812 416 aaPredicted RBP6.07□□□□□ -1.44
MSH4-201ENST00000263187 COX7BP24311 80 aa6.07□□□□□ -1.44
MSH4-201ENST00000263187 J3KT08 172 aa6.06□□□□□ -1.44
MSH4-201ENST00000263187 OXTP01178 125 aa6.06□□□□□ -1.44
MSH4-201ENST00000263187 ESRGQ1W209 222 aa6.06□□□□□ -1.44
MSH4-201ENST00000263187 MUC7Q8TAX7 377 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 TENM2Q9NT68 2774 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 MGAM2Q2M2H8 2515 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 C3orf84H3BNL1 204 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 Q6ZRP5 223 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 DPH3Q96FX2 82 aa6.05□□□□□ -1.44
MSH4-201ENST00000263187 SRRM2Q9UQ35 2752 aaKnown RBP6.05□□□□□ -1.44
MSH4-201ENST00000263187 KRTAP10-11P60412 298 aa6.04□□□□□ -1.44
MSH4-201ENST00000263187 VPREB1P12018 145 aa6.03□□□□□ -1.44
MSH4-201ENST00000263187 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
MSH4-201ENST00000263187 C1orf43Q9BWL3 253 aa6.03□□□□□ -1.44
MSH4-201ENST00000263187 RMI2Q96E14 147 aa6.03□□□□□ -1.44
MSH4-201ENST00000263187 LYSTQ99698 3801 aa6.02□□□□□ -1.45
MSH4-201ENST00000263187 FAM168BA1KXE4 195 aa6.02□□□□□ -1.45
MSH4-201ENST00000263187 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
MSH4-201ENST00000263187 ELOF1P60002 83 aaKnown RBP6.01□□□□□ -1.45
MSH4-201ENST00000263187 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms