RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
TRAF4-202ENST00000262396 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
TRAF4-202ENST00000262396 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
TRAF4-202ENST00000262396 IGLV5-39A0A0G2JS06 123 aa7.17□□□□□ -1.26
TRAF4-202ENST00000262396 A0A0U1RRA0 63 aa7.17□□□□□ -1.26
TRAF4-202ENST00000262396 VPREB1P12018 145 aa7.17□□□□□ -1.26
TRAF4-202ENST00000262396 S100A12P80511 92 aa7.16□□□□□ -1.26
TRAF4-202ENST00000262396 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
TRAF4-202ENST00000262396 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
TRAF4-202ENST00000262396 CHTOPQ9Y3Y2 248 aaKnown RBP7.16□□□□□ -1.26
TRAF4-202ENST00000262396 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
TRAF4-202ENST00000262396 C11orf86A6NJI1 115 aa7.15□□□□□ -1.26
TRAF4-202ENST00000262396 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.26
TRAF4-202ENST00000262396 C18orf32Q8TCD1 76 aa7.15□□□□□ -1.26
TRAF4-202ENST00000262396 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
TRAF4-202ENST00000262396 M0R378 163 aa7.13□□□□□ -1.27
TRAF4-202ENST00000262396 A0A096LNJ9 63 aa7.12□□□□□ -1.27
TRAF4-202ENST00000262396 PLEKHB2Q96CS7 222 aa7.12□□□□□ -1.27
TRAF4-202ENST00000262396 ETDCA0A1B0GVM5 59 aa7.11□□□□□ -1.27
TRAF4-202ENST00000262396 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
TRAF4-202ENST00000262396 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
TRAF4-202ENST00000262396 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
TRAF4-202ENST00000262396 MUC2Q02817 5179 aa7.11□□□□□ -1.27
TRAF4-202ENST00000262396 H0Y8G0 127 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 NCR3O14931 201 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 URB1-AS1Q96HZ7 61 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
TRAF4-202ENST00000262396 CTAG1AP78358 180 aa7.09□□□□□ -1.27
TRAF4-202ENST00000262396 TMEM223A0PJW6 202 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 PRYO14603 147 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 HERV-K104P63124 156 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
TRAF4-202ENST00000262396 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
TRAF4-202ENST00000262396 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
TRAF4-202ENST00000262396 MYMXA0A1B0GTQ4 84 aa7.07□□□□□ -1.28
TRAF4-202ENST00000262396 HSBP1O75506 76 aa7.07□□□□□ -1.28
TRAF4-202ENST00000262396 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
TRAF4-202ENST00000262396 Q8NDZ9 215 aa7.07□□□□□ -1.28
TRAF4-202ENST00000262396 SMCR5Q8TEV8 140 aa7.06□□□□□ -1.28
TRAF4-202ENST00000262396 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
TRAF4-202ENST00000262396 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
TRAF4-202ENST00000262396 DAND5Q8N907 189 aa7.05□□□□□ -1.28
TRAF4-202ENST00000262396 COLCA2A8K830 154 aa7.04□□□□□ -1.28
TRAF4-202ENST00000262396 TRGC2P03986 189 aa7.04□□□□□ -1.28
TRAF4-202ENST00000262396 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
TRAF4-202ENST00000262396 Q8NBF4 154 aa7.04□□□□□ -1.28
TRAF4-202ENST00000262396 HERVK_113P61574 105 aa7.03□□□□□ -1.28
TRAF4-202ENST00000262396 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
TRAF4-202ENST00000262396 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
TRAF4-202ENST00000262396 TRBV10-3A0A0K0K1G6 114 aa7.02□□□□□ -1.29
TRAF4-202ENST00000262396 S100A7L2Q5SY68 101 aa7.02□□□□□ -1.29
TRAF4-202ENST00000262396 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
TRAF4-202ENST00000262396 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
TRAF4-202ENST00000262396 SPINK1P00995 79 aa7.01□□□□□ -1.29
TRAF4-202ENST00000262396 DDTP30046 118 aa7.01□□□□□ -1.29
TRAF4-202ENST00000262396 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
TRAF4-202ENST00000262396 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
TRAF4-202ENST00000262396 LEPROTO15243 131 aa6.99□□□□□ -1.29
TRAF4-202ENST00000262396 PLNP26678 52 aa6.99□□□□□ -1.29
TRAF4-202ENST00000262396 MOBPQ13875 183 aa6.99□□□□□ -1.29
TRAF4-202ENST00000262396 SPRR1AP35321 89 aa6.98□□□□□ -1.29
TRAF4-202ENST00000262396 HINT1P49773 126 aaPredicted RBP6.98□□□□□ -1.29
TRAF4-202ENST00000262396 JOSD1Q15040 202 aaPredicted RBP6.98□□□□□ -1.29
TRAF4-202ENST00000262396 C9orf153Q5TBE3 101 aa6.98□□□□□ -1.29
TRAF4-202ENST00000262396 HSPB8Q9UJY1 196 aa6.98□□□□□ -1.29
TRAF4-202ENST00000262396 FABP4P15090 132 aa6.97□□□□□ -1.29
TRAF4-202ENST00000262396 SPANXB1Q9NS25 103 aaPredicted RBP6.97□□□□□ -1.29
TRAF4-202ENST00000262396 TRBV10-2A0A0K0K1G8 114 aa6.96□□□□□ -1.3
TRAF4-202ENST00000262396 B5MCH6 92 aa6.96□□□□□ -1.3
TRAF4-202ENST00000262396 J3QQQ9 107 aa6.96□□□□□ -1.3
TRAF4-202ENST00000262396 DPM2O94777 84 aa6.96□□□□□ -1.3
TRAF4-202ENST00000262396 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
TRAF4-202ENST00000262396 NMUP48645 174 aa6.95□□□□□ -1.3
TRAF4-202ENST00000262396 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
TRAF4-202ENST00000262396 NPC2P61916 151 aa6.95□□□□□ -1.3
TRAF4-202ENST00000262396 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
TRAF4-202ENST00000262396 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
TRAF4-202ENST00000262396 TRAV23DV6A0A075B6W5 121 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 SLC25A20O43772 301 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 SERF1AO75920 110 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 IGKCP01834 107 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
TRAF4-202ENST00000262396 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 LINC01547P58512 204 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
TRAF4-202ENST00000262396 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms