RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 C8orf87E5RJ46 101 aa5.96□□□□□ -1.46
SNCAIP-201ENST00000261367 LCA10Q71F78 164 aa5.96□□□□□ -1.46
SNCAIP-201ENST00000261367 JMJD1CQ15652 2540 aa5.96□□□□□ -1.46
SNCAIP-201ENST00000261367 F8W735 103 aaPredicted RBP5.96□□□□□ -1.46
SNCAIP-201ENST00000261367 PROK1P58294 105 aa5.96□□□□□ -1.46
SNCAIP-201ENST00000261367 LINC01548A6NM66 108 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 LINC00315P59091 139 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 C7orf65Q6ZTY9 151 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 PLA2G2CQ5R387 149 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 ANKHD1Q8IWZ3 2542 aaKnown RBP5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 USP9XQ93008 2570 aaPredicted RBP5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 SETXQ7Z333 2677 aaKnown RBP5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 IGLV1-40P01703 118 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 A0A1B0GUV1 79 aa5.95□□□□□ -1.46
SNCAIP-201ENST00000261367 TLN2Q9Y4G6 2542 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 RNF223E7ERA6 249 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 SPATA3Q8NHX4 192 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 FN1P02751 2386 aaKnown RBP5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 IGHV4-38-2P0DP08 117 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 CELSR2Q9HCU4 2923 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 C11orf72Q8NBR9 251 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
SNCAIP-201ENST00000261367 SYCNQ0VAF6 134 aa5.93□□□□□ -1.46
SNCAIP-201ENST00000261367 HRNRQ86YZ3 2850 aaPredicted RBP5.93□□□□□ -1.46
SNCAIP-201ENST00000261367 LELP1Q5T871 98 aa5.93□□□□□ -1.46
SNCAIP-201ENST00000261367 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
SNCAIP-201ENST00000261367 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
SNCAIP-201ENST00000261367 DSCAML1Q8TD84 2053 aa5.92□□□□□ -1.46
SNCAIP-201ENST00000261367 Q8N2B8 174 aa5.92□□□□□ -1.46
SNCAIP-201ENST00000261367 SPAG11AQ6PDA7 123 aa5.91□□□□□ -1.46
SNCAIP-201ENST00000261367 TRAV10A0A0B4J240 114 aa5.91□□□□□ -1.46
SNCAIP-201ENST00000261367 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
SNCAIP-201ENST00000261367 MYO9AB2RTY4 2548 aa5.91□□□□□ -1.46
SNCAIP-201ENST00000261367 LY6G6DO95868 133 aa5.9□□□□□ -1.46
SNCAIP-201ENST00000261367 DEFB136Q30KP8 78 aa5.9□□□□□ -1.46
SNCAIP-201ENST00000261367 LMO4P61968 165 aa5.9□□□□□ -1.46
SNCAIP-201ENST00000261367 TM2D3Q9BRN9 247 aa5.9□□□□□ -1.46
SNCAIP-201ENST00000261367 IGHV4-61A0A0C4DH41 118 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 AGRNO00468 2067 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 Q1T7F1 81 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.47
SNCAIP-201ENST00000261367 DEFB113Q30KQ7 82 aa5.89□□□□□ -1.47
SNCAIP-201ENST00000261367 CYSRT1A8MQ03 144 aa5.89□□□□□ -1.47
SNCAIP-201ENST00000261367 KLK9Q2XQG4 91 aa5.89□□□□□ -1.47
SNCAIP-201ENST00000261367 EDN2P20800 178 aa5.89□□□□□ -1.47
SNCAIP-201ENST00000261367 NANOS2P60321 138 aaKnown RBP5.88□□□□□ -1.47
SNCAIP-201ENST00000261367 Q5XG85 94 aa5.88□□□□□ -1.47
SNCAIP-201ENST00000261367 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
SNCAIP-201ENST00000261367 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
SNCAIP-201ENST00000261367 LINC00474Q9P2X8 69 aa5.87□□□□□ -1.47
SNCAIP-201ENST00000261367 SETD2Q9BYW2 2564 aaPredicted RBP5.87□□□□□ -1.47
SNCAIP-201ENST00000261367 OBSCN-AS1Q96MR7 158 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 HIVEP3Q5T1R4 2406 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 C11orf71Q6IPW1 123 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 LINC00167Q96N53 147 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 IGHV4-30-2A0A087WSY4 118 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 IGHV3OR16-9A0A0B4J2B5 98 aa5.86□□□□□ -1.47
SNCAIP-201ENST00000261367 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 ACYP2P14621 99 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 CSPG4Q6UVK1 2322 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 ZANQ9Y493 2812 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 USP9YO00507 2555 aaPredicted RBP5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 Q6YL49 198 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 SPANXA2-OT1Q8N9U9 137 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 POLQO75417 2590 aa5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 RAI1Q7Z5J4 1906 aaPredicted RBP5.85□□□□□ -1.47
SNCAIP-201ENST00000261367 A8MUN3 132 aa5.84□□□□□ -1.47
SNCAIP-201ENST00000261367 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.48
SNCAIP-201ENST00000261367 A0A1B0GU69 56 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 FLNCQ14315 2725 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 Q6ZTC4 211 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 IGKV2-28A0A075B6P5 120 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 IGKV2D-28P01615 120 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 C4orf48Q5BLP8 95 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 IGLV4-60A0A075B6I1 120 aa5.83□□□□□ -1.48
SNCAIP-201ENST00000261367 SORL1Q92673 2214 aa5.82□□□□□ -1.48
SNCAIP-201ENST00000261367 Q8NBF4 154 aa5.82□□□□□ -1.48
SNCAIP-201ENST00000261367 A0A0J9YWU9 116 aa5.82□□□□□ -1.48
SNCAIP-201ENST00000261367 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
SNCAIP-201ENST00000261367 DNAJC9-AS1A6NH13 148 aa5.81□□□□□ -1.48
SNCAIP-201ENST00000261367 PRR3P79522 188 aaKnown RBP5.81□□□□□ -1.48
SNCAIP-201ENST00000261367 Q6ZRU5 148 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 BBC3Q96PG8 261 aaPredicted RBP5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 ITPR1Q14643 2758 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 PRRC2AP48634 2157 aaKnown RBP5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 ADORA2A-AS1P86434 159 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 Q6ZSN1 163 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 GRNP28799 593 aaKnown RBP5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 LYPD5Q6UWN5 251 aa5.8□□□□□ -1.48
SNCAIP-201ENST00000261367 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
SNCAIP-201ENST00000261367 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
SNCAIP-201ENST00000261367 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms