RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
CHRNA1-201ENST00000261007 DAD1P61803 113 aa7.4□□□□□ -1.22
CHRNA1-201ENST00000261007 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
CHRNA1-201ENST00000261007 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.23
CHRNA1-201ENST00000261007 H3BQ85 93 aa7.4□□□□□ -1.23
CHRNA1-201ENST00000261007 H7BZZ5 65 aa7.4□□□□□ -1.23
CHRNA1-201ENST00000261007 KLKP1Q107X0 134 aa7.4□□□□□ -1.23
CHRNA1-201ENST00000261007 Q6ZQT0 140 aa7.4□□□□□ -1.23
CHRNA1-201ENST00000261007 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 RBM3P98179 157 aaKnown RBP7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 SPATA3Q8NHX4 192 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 PDE6GP18545 87 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
CHRNA1-201ENST00000261007 Q8NAQ8 132 aa7.38□□□□□ -1.23
CHRNA1-201ENST00000261007 CXCL6P80162 114 aa7.37□□□□□ -1.23
CHRNA1-201ENST00000261007 NF1P21359 2839 aa7.37□□□□□ -1.23
CHRNA1-201ENST00000261007 IGHV4-30-4P0DP06 118 aa7.37□□□□□ -1.23
CHRNA1-201ENST00000261007 MUC7Q8TAX7 377 aa7.37□□□□□ -1.23
CHRNA1-201ENST00000261007 C2CD3Q4AC94 2353 aa7.36□□□□□ -1.23
CHRNA1-201ENST00000261007 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
CHRNA1-201ENST00000261007 LINC01547P58512 204 aaPredicted RBP7.36□□□□□ -1.23
CHRNA1-201ENST00000261007 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
CHRNA1-201ENST00000261007 FN1P02751 2386 aaKnown RBP7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 NDUFC1O43677 76 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 NOTCH3Q9UM47 2321 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 Q6ZVQ6 151 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 PRO0628Q9UI54 55 aa7.35□□□□□ -1.23
CHRNA1-201ENST00000261007 SETD2Q9BYW2 2564 aaPredicted RBP7.34□□□□□ -1.23
CHRNA1-201ENST00000261007 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
CHRNA1-201ENST00000261007 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
CHRNA1-201ENST00000261007 LELP1Q5T871 98 aa7.33□□□□□ -1.24
CHRNA1-201ENST00000261007 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
CHRNA1-201ENST00000261007 LAMTOR3Q9UHA4 124 aa7.33□□□□□ -1.24
CHRNA1-201ENST00000261007 DEFB4AO15263 64 aa7.32□□□□□ -1.24
CHRNA1-201ENST00000261007 HAMPP81172 84 aa7.32□□□□□ -1.24
CHRNA1-201ENST00000261007 HECTD1Q9ULT8 2610 aa7.32□□□□□ -1.24
CHRNA1-201ENST00000261007 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
CHRNA1-201ENST00000261007 TRAV10A0A0B4J240 114 aa7.31□□□□□ -1.24
CHRNA1-201ENST00000261007 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
CHRNA1-201ENST00000261007 CUBNO60494 3623 aa7.31□□□□□ -1.24
CHRNA1-201ENST00000261007 H3BNG1 76 aa7.31□□□□□ -1.24
CHRNA1-201ENST00000261007 EGFEM1PQ0D2K5 195 aa7.31□□□□□ -1.24
CHRNA1-201ENST00000261007 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
CHRNA1-201ENST00000261007 A0A096LPF7 62 aa7.3□□□□□ -1.24
CHRNA1-201ENST00000261007 NOTCH2Q04721 2471 aa7.3□□□□□ -1.24
CHRNA1-201ENST00000261007 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 RMI2Q96E14 147 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 F8WEM9 126 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 M0R2N4 97 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 REG3AQ06141 175 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 LINC00269Q8N2A0 174 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
CHRNA1-201ENST00000261007 KRTAP24-1Q3LI83 254 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 LINC00336Q6ZUF6 198 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 Q8NDZ9 215 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 HTN3P15516 51 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 FP248Q71RG6 208 aaPredicted RBP7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 Q8N3U1 123 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
CHRNA1-201ENST00000261007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.27□□□□□ -1.25
CHRNA1-201ENST00000261007 Q6ZQY7 126 aa7.26□□□□□ -1.25
CHRNA1-201ENST00000261007 A0A0J9YWU9 116 aa7.26□□□□□ -1.25
CHRNA1-201ENST00000261007 TRBV7-6A0A0J9YX20 115 aa7.26□□□□□ -1.25
CHRNA1-201ENST00000261007 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
CHRNA1-201ENST00000261007 CLPSL2Q6UWE3 100 aa7.26□□□□□ -1.25
CHRNA1-201ENST00000261007 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
CHRNA1-201ENST00000261007 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
CHRNA1-201ENST00000261007 NREPQ16612 68 aa7.24□□□□□ -1.25
CHRNA1-201ENST00000261007 TM2D3Q9BRN9 247 aa7.24□□□□□ -1.25
CHRNA1-201ENST00000261007 HIVEP1P15822 2718 aa7.23□□□□□ -1.25
CHRNA1-201ENST00000261007 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
CHRNA1-201ENST00000261007 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
CHRNA1-201ENST00000261007 SPAG11BQ08648 103 aa7.22□□□□□ -1.25
CHRNA1-201ENST00000261007 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
CHRNA1-201ENST00000261007 BPY2O14599 106 aa7.21□□□□□ -1.26
CHRNA1-201ENST00000261007 KPRPQ5T749 579 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-201ENST00000261007 UNQ6190/PRO20217Q6UXQ8 127 aa7.21□□□□□ -1.26
CHRNA1-201ENST00000261007 IGLV10-54A0A075B6I4 117 aa7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 COX7BP24311 80 aa7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 C10orf25Q5T742 122 aa7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 J3QL48 77 aa7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-201ENST00000261007 CYSRT1A8MQ03 144 aa7.19□□□□□ -1.26
CHRNA1-201ENST00000261007 C1orf43Q9BWL3 253 aa7.19□□□□□ -1.26
CHRNA1-201ENST00000261007 RETNQ9HD89 108 aa7.19□□□□□ -1.26
CHRNA1-201ENST00000261007 ZNF73O43830 326 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-201ENST00000261007 TEP1Q99973 2627 aaKnown RBP7.18□□□□□ -1.26
CHRNA1-201ENST00000261007 A0A0U1RQV1 116 aa7.18□□□□□ -1.26
CHRNA1-201ENST00000261007 Q6ZTC4 211 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms