RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PFN2P35080 140 aa10.15□□□□□ -0.79
CCDC90B-201ENST00000260054 TLX1NBP0CAT3 122 aa10.14□□□□□ -0.79
CCDC90B-201ENST00000260054 MEIG1Q5JSS6 88 aa10.14□□□□□ -0.79
CCDC90B-201ENST00000260054 Q6ZRP5 223 aa10.14□□□□□ -0.79
CCDC90B-201ENST00000260054 A0A0U1RRA0 63 aa10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 LOC107984640A0A0U1RRK4 108 aa10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 NDUFC2-KCTD14E9PQ53 114 aa10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 J3QR89 54 aa10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 RPL18AQ02543 176 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 NHP2Q9NX24 153 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-201ENST00000260054 C16orf90A8MZG2 172 aa10.12□□□□□ -0.79
CCDC90B-201ENST00000260054 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
CCDC90B-201ENST00000260054 EPPK1P58107 5090 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-201ENST00000260054 A0A096LNI7 61 aa10.12□□□□□ -0.79
CCDC90B-201ENST00000260054 COX17Q14061 63 aa10.12□□□□□ -0.79
CCDC90B-201ENST00000260054 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 K7ERJ3 54 aa10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 LINC00158P58513 81 aa10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 SCGB1D4Q6XE38 83 aa10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 DYNC1H1Q14204 4646 aaKnown RBP10.11□□□□□ -0.79
CCDC90B-201ENST00000260054 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
CCDC90B-201ENST00000260054 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
CCDC90B-201ENST00000260054 LITAFQ99732 161 aa10.1□□□□□ -0.79
CCDC90B-201ENST00000260054 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
CCDC90B-201ENST00000260054 IGKV2-24A0A0C4DH68 120 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 PANO1I0J062 215 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 ADAMTSL4-AS1Q5T5F5 129 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 DAND5Q8N907 189 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 HIST1H4GQ99525 98 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 SPANXB1Q9NS25 103 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-201ENST00000260054 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
CCDC90B-201ENST00000260054 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
CCDC90B-201ENST00000260054 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
CCDC90B-201ENST00000260054 FAM30AQ9NZY2 134 aa10.08□□□□□ -0.8
CCDC90B-201ENST00000260054 TIMM17BO60830 172 aa10.07□□□□□ -0.8
CCDC90B-201ENST00000260054 CIRBPQ14011 172 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-201ENST00000260054 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-201ENST00000260054 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
CCDC90B-201ENST00000260054 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
CCDC90B-201ENST00000260054 Q6ZSA8 131 aa10.06□□□□□ -0.8
CCDC90B-201ENST00000260054 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
CCDC90B-201ENST00000260054 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
CCDC90B-201ENST00000260054 A6NJY4 79 aa10.04□□□□□ -0.8
CCDC90B-201ENST00000260054 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
CCDC90B-201ENST00000260054 PRO0461Q9UI25 63 aa10.04□□□□□ -0.8
CCDC90B-201ENST00000260054 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
CCDC90B-201ENST00000260054 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.8
CCDC90B-201ENST00000260054 NPC2P61916 151 aa10.02□□□□□ -0.8
CCDC90B-201ENST00000260054 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
CCDC90B-201ENST00000260054 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
CCDC90B-201ENST00000260054 SPANXDQ9BXN6 97 aa10.02□□□□□ -0.81
CCDC90B-201ENST00000260054 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
CCDC90B-201ENST00000260054 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
CCDC90B-201ENST00000260054 H3BMG7 143 aa10.01□□□□□ -0.81
CCDC90B-201ENST00000260054 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
CCDC90B-201ENST00000260054 DPH3Q96FX2 82 aa10.01□□□□□ -0.81
CCDC90B-201ENST00000260054 A0A087WYN8 130 aa10□□□□□ -0.81
CCDC90B-201ENST00000260054 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
CCDC90B-201ENST00000260054 Q8NDZ9 215 aa10□□□□□ -0.81
CCDC90B-201ENST00000260054 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
CCDC90B-201ENST00000260054 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 HAMPP81172 84 aa9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 ETDBQ3ZM63 59 aa9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC90B-201ENST00000260054 SCXQ7RTU7 201 aa9.98□□□□□ -0.81
CCDC90B-201ENST00000260054 FAM19A5Q7Z5A7 132 aaPredicted RBP9.98□□□□□ -0.81
CCDC90B-201ENST00000260054 CIRBP-AS1Q8TBR5 109 aa9.98□□□□□ -0.81
CCDC90B-201ENST00000260054 A0A1B0GV72 72 aa9.97□□□□□ -0.81
CCDC90B-201ENST00000260054 APOBP04114 4563 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-201ENST00000260054 EPM2AB3EWF7 344 aa9.96□□□□□ -0.81
CCDC90B-201ENST00000260054 VPREB1P12018 145 aa9.96□□□□□ -0.81
CCDC90B-201ENST00000260054 MUSTN1Q8IVN3 82 aa9.96□□□□□ -0.81
CCDC90B-201ENST00000260054 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.81
CCDC90B-201ENST00000260054 PLA2G2DQ9UNK4 145 aa9.96□□□□□ -0.81
CCDC90B-201ENST00000260054 IFITM1P13164 125 aa9.96□□□□□ -0.82
CCDC90B-201ENST00000260054 XGP55808 180 aa9.96□□□□□ -0.82
CCDC90B-201ENST00000260054 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-201ENST00000260054 TSPAN13O95857 204 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 TRBV20-1A0A075B6N2 111 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 M0QXV9 152 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
CCDC90B-201ENST00000260054 NDUFC2O95298 119 aa9.92□□□□□ -0.82
CCDC90B-201ENST00000260054 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
CCDC90B-201ENST00000260054 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
CCDC90B-201ENST00000260054 NCR3O14931 201 aa9.91□□□□□ -0.82
CCDC90B-201ENST00000260054 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-201ENST00000260054 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
CCDC90B-201ENST00000260054 MTURNQ8N3F0 131 aa9.9□□□□□ -0.82
CCDC90B-201ENST00000260054 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
CCDC90B-201ENST00000260054 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
CCDC90B-201ENST00000260054 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms