RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
SRSF1-201ENST00000258962 F8WDY8 70 aa11.47□□□□□ -0.57
SRSF1-201ENST00000258962 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
SRSF1-201ENST00000258962 H7C2G1 150 aa11.46□□□□□ -0.57
SRSF1-201ENST00000258962 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
SRSF1-201ENST00000258962 SND1-IT1Q9HBX3 110 aa11.46□□□□□ -0.57
SRSF1-201ENST00000258962 EPPK1P58107 5090 aaKnown RBP11.46□□□□□ -0.58
SRSF1-201ENST00000258962 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
SRSF1-201ENST00000258962 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
SRSF1-201ENST00000258962 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
SRSF1-201ENST00000258962 TNP2Q05952 138 aa11.45□□□□□ -0.58
SRSF1-201ENST00000258962 Q6ZRU5 148 aa11.44□□□□□ -0.58
SRSF1-201ENST00000258962 A0A1B0GVY2 172 aa11.43□□□□□ -0.58
SRSF1-201ENST00000258962 H3BMG7 143 aa11.43□□□□□ -0.58
SRSF1-201ENST00000258962 FRAS1Q86XX4 4008 aa11.42□□□□□ -0.58
SRSF1-201ENST00000258962 ATXN8Q156A1 80 aa11.41□□□□□ -0.58
SRSF1-201ENST00000258962 DNAH2Q9P225 4427 aa11.4□□□□□ -0.58
SRSF1-201ENST00000258962 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.59
SRSF1-201ENST00000258962 LECT2O14960 151 aa11.4□□□□□ -0.59
SRSF1-201ENST00000258962 NDUFC2O95298 119 aa11.4□□□□□ -0.59
SRSF1-201ENST00000258962 IGKV2D-28P01615 120 aa11.4□□□□□ -0.59
SRSF1-201ENST00000258962 TRIAP1O43715 76 aa11.39□□□□□ -0.59
SRSF1-201ENST00000258962 TCL1BO95988 128 aa11.39□□□□□ -0.59
SRSF1-201ENST00000258962 SLPIP03973 132 aa11.39□□□□□ -0.59
SRSF1-201ENST00000258962 SYCNQ0VAF6 134 aa11.39□□□□□ -0.59
SRSF1-201ENST00000258962 WFDC2Q14508 124 aa11.39□□□□□ -0.59
SRSF1-201ENST00000258962 Q6ZRN7 208 aaPredicted RBP11.39□□□□□ -0.59
SRSF1-201ENST00000258962 PSCAO43653 123 aa11.37□□□□□ -0.59
SRSF1-201ENST00000258962 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
SRSF1-201ENST00000258962 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
SRSF1-201ENST00000258962 Q8NDZ9 215 aa11.36□□□□□ -0.59
SRSF1-201ENST00000258962 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
SRSF1-201ENST00000258962 K7ERU9 68 aa11.35□□□□□ -0.59
SRSF1-201ENST00000258962 RPL28P46779 137 aaKnown RBP11.35□□□□□ -0.59
SRSF1-201ENST00000258962 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
SRSF1-201ENST00000258962 FAT2Q9NYQ8 4349 aa11.33□□□□□ -0.6
SRSF1-201ENST00000258962 BIRC6Q9NR09 4857 aa11.33□□□□□ -0.6
SRSF1-201ENST00000258962 M0QXV9 152 aa11.33□□□□□ -0.6
SRSF1-201ENST00000258962 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
SRSF1-201ENST00000258962 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
SRSF1-201ENST00000258962 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
SRSF1-201ENST00000258962 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
SRSF1-201ENST00000258962 H0YGX0 51 aa11.31□□□□□ -0.6
SRSF1-201ENST00000258962 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
SRSF1-201ENST00000258962 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
SRSF1-201ENST00000258962 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
SRSF1-201ENST00000258962 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 J3QR89 54 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 Q6ZRP5 223 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 TMEM126AQ9H061 195 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 A0A087WTM6 91 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 LST1O00453 97 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 TLX1NBP0CAT3 122 aa11.3□□□□□ -0.6
SRSF1-201ENST00000258962 HECTD4Q9Y4D8 3996 aa11.29□□□□□ -0.6
SRSF1-201ENST00000258962 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
SRSF1-201ENST00000258962 C9JAW5 83 aa11.29□□□□□ -0.6
SRSF1-201ENST00000258962 NCR3O14931 201 aa11.28□□□□□ -0.6
SRSF1-201ENST00000258962 SLC25A20O43772 301 aa11.28□□□□□ -0.6
SRSF1-201ENST00000258962 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
SRSF1-201ENST00000258962 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
SRSF1-201ENST00000258962 TRBV10-2A0A0K0K1G8 114 aa11.27□□□□□ -0.61
SRSF1-201ENST00000258962 KRTAP10-2P60368 255 aa11.26□□□□□ -0.61
SRSF1-201ENST00000258962 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
SRSF1-201ENST00000258962 SMIM11BQ8TCY0 68 aa11.26□□□□□ -0.61
SRSF1-201ENST00000258962 LINC01600Q96MT4 127 aa11.26□□□□□ -0.61
SRSF1-201ENST00000258962 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
SRSF1-201ENST00000258962 H3BT86 120 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 TRACP01848 142 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
SRSF1-201ENST00000258962 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 SNCGO76070 127 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 VPREB1P12018 145 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
SRSF1-201ENST00000258962 ETDBQ3ZM63 59 aa11.25□□□□□ -0.61
SRSF1-201ENST00000258962 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
SRSF1-201ENST00000258962 ANKRD29Q8N6D5 301 aa11.24□□□□□ -0.61
SRSF1-201ENST00000258962 PKD1P98161 4303 aa11.24□□□□□ -0.61
SRSF1-201ENST00000258962 MTURNQ8N3F0 131 aa11.23□□□□□ -0.61
SRSF1-201ENST00000258962 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-201ENST00000258962 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
SRSF1-201ENST00000258962 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
SRSF1-201ENST00000258962 Q8N814 137 aa11.2□□□□□ -0.62
SRSF1-201ENST00000258962 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
SRSF1-201ENST00000258962 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
SRSF1-201ENST00000258962 A0A1B0GX51 115 aa11.19□□□□□ -0.62
SRSF1-201ENST00000258962 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.622e-8■■□□□ 12.8
SRSF1-201ENST00000258962 DNAL4O96015 105 aa11.19□□□□□ -0.62
SRSF1-201ENST00000258962 IGLV6-57P01721 117 aa11.19□□□□□ -0.62
SRSF1-201ENST00000258962 IGLV5-52A0A0A0MRZ9 124 aa11.18□□□□□ -0.62
SRSF1-201ENST00000258962 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
SRSF1-201ENST00000258962 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
SRSF1-201ENST00000258962 M0R378 163 aa11.17□□□□□ -0.62
SRSF1-201ENST00000258962 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
SRSF1-201ENST00000258962 DNAH11Q96DT5 4516 aa11.16□□□□□ -0.62
SRSF1-201ENST00000258962 TRBV10-3A0A0K0K1G6 114 aa11.15□□□□□ -0.62
SRSF1-201ENST00000258962 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
SRSF1-201ENST00000258962 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
SRSF1-201ENST00000258962 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms