RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 LINC00158P58513 81 aa11.08□□□□□ -0.64
TM6SF1-201ENST00000258909 FAM229BQ4G0N7 80 aa11.08□□□□□ -0.64
TM6SF1-201ENST00000258909 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
TM6SF1-201ENST00000258909 SNAPINO95295 136 aa11.07□□□□□ -0.64
TM6SF1-201ENST00000258909 LINC00304Q8N9R0 145 aa11.06□□□□□ -0.64
TM6SF1-201ENST00000258909 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
TM6SF1-201ENST00000258909 SFTA2Q6UW10 78 aa11.06□□□□□ -0.64
TM6SF1-201ENST00000258909 SVBPQ8N300 66 aa11.06□□□□□ -0.64
TM6SF1-201ENST00000258909 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
TM6SF1-201ENST00000258909 NDUFA5Q16718 116 aa11.05□□□□□ -0.64
TM6SF1-201ENST00000258909 CBLN2Q8IUK8 224 aa11.04□□□□□ -0.64
TM6SF1-201ENST00000258909 IFI27L1Q96BM0 104 aa11.04□□□□□ -0.64
TM6SF1-201ENST00000258909 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
TM6SF1-201ENST00000258909 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
TM6SF1-201ENST00000258909 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
TM6SF1-201ENST00000258909 TRAV12-1A0A0B4J245 112 aa11.02□□□□□ -0.65
TM6SF1-201ENST00000258909 SMIM13P0DJ93 91 aa11.02□□□□□ -0.65
TM6SF1-201ENST00000258909 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
TM6SF1-201ENST00000258909 C3orf22Q8N5N4 141 aa11.01□□□□□ -0.65
TM6SF1-201ENST00000258909 FAM19A2Q8N3H0 131 aa11□□□□□ -0.65
TM6SF1-201ENST00000258909 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
TM6SF1-201ENST00000258909 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
TM6SF1-201ENST00000258909 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
TM6SF1-201ENST00000258909 H0Y8G0 127 aa10.97□□□□□ -0.65
TM6SF1-201ENST00000258909 NCR3O14931 201 aa10.97□□□□□ -0.65
TM6SF1-201ENST00000258909 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
TM6SF1-201ENST00000258909 HSBP1O75506 76 aa10.96□□□□□ -0.65
TM6SF1-201ENST00000258909 SPRR4Q96PI1 79 aa10.95□□□□□ -0.66
TM6SF1-201ENST00000258909 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
TM6SF1-201ENST00000258909 IGLV7-46A0A075B6I9 117 aa10.93□□□□□ -0.66
TM6SF1-201ENST00000258909 PRYO14603 147 aa10.93□□□□□ -0.66
TM6SF1-201ENST00000258909 HERV-K104P63124 156 aa10.93□□□□□ -0.66
TM6SF1-201ENST00000258909 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
TM6SF1-201ENST00000258909 TSPEAR-AS2P59090 65 aa10.91□□□□□ -0.66
TM6SF1-201ENST00000258909 CDIP1Q9H305 208 aa10.91□□□□□ -0.66
TM6SF1-201ENST00000258909 MUC17Q685J3 4493 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 MYMXA0A1B0GTQ4 84 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 TRGC2P03986 189 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 DAND5Q8N907 189 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 KCNQ1DNQ9H478 68 aa10.9□□□□□ -0.66
TM6SF1-201ENST00000258909 SPRR1AP35321 89 aa10.89□□□□□ -0.67
TM6SF1-201ENST00000258909 LINC00310P59036 64 aa10.89□□□□□ -0.67
TM6SF1-201ENST00000258909 LINC00337Q8N6G1 96 aa10.89□□□□□ -0.67
TM6SF1-201ENST00000258909 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
TM6SF1-201ENST00000258909 ETDCA0A1B0GVM5 59 aa10.88□□□□□ -0.67
TM6SF1-201ENST00000258909 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
TM6SF1-201ENST00000258909 TPRXLQ17RH7 258 aa10.88□□□□□ -0.67
TM6SF1-201ENST00000258909 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
TM6SF1-201ENST00000258909 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
TM6SF1-201ENST00000258909 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
TM6SF1-201ENST00000258909 SERF1AO75920 110 aa10.87□□□□□ -0.67
TM6SF1-201ENST00000258909 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
TM6SF1-201ENST00000258909 LEPROTO15243 131 aa10.86□□□□□ -0.67
TM6SF1-201ENST00000258909 CTAG1AP78358 180 aa10.86□□□□□ -0.67
TM6SF1-201ENST00000258909 SPAG11AQ6PDA7 123 aa10.86□□□□□ -0.67
TM6SF1-201ENST00000258909 Q8NBF4 154 aa10.86□□□□□ -0.67
TM6SF1-201ENST00000258909 PMCHL2Q9BQD1 86 aa10.86□□□□□ -0.67
TM6SF1-201ENST00000258909 FABP4P15090 132 aa10.85□□□□□ -0.67
TM6SF1-201ENST00000258909 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
TM6SF1-201ENST00000258909 J3QQQ9 107 aa10.82□□□□□ -0.68
TM6SF1-201ENST00000258909 PLNP26678 52 aa10.82□□□□□ -0.68
TM6SF1-201ENST00000258909 GAGE2AQ6NT46 116 aa10.82□□□□□ -0.68
TM6SF1-201ENST00000258909 B5MCH6 92 aa10.81□□□□□ -0.68
TM6SF1-201ENST00000258909 ERC2-IT1O76042 136 aa10.81□□□□□ -0.68
TM6SF1-201ENST00000258909 DDTP30046 118 aa10.81□□□□□ -0.68
TM6SF1-201ENST00000258909 DPM2O94777 84 aa10.81□□□□□ -0.68
TM6SF1-201ENST00000258909 S100A12P80511 92 aa10.81□□□□□ -0.68
TM6SF1-201ENST00000258909 LOC107984156A0A0G2JMH3 177 aa10.8□□□□□ -0.68
TM6SF1-201ENST00000258909 ARL17AQ8IVW1 177 aa10.8□□□□□ -0.68
TM6SF1-201ENST00000258909 HSPB8Q9UJY1 196 aa10.8□□□□□ -0.68
TM6SF1-201ENST00000258909 HERVK_113P61574 105 aa10.79□□□□□ -0.68
TM6SF1-201ENST00000258909 LINC00483Q53H64 154 aa10.79□□□□□ -0.68
TM6SF1-201ENST00000258909 IGKCP01834 107 aa10.78□□□□□ -0.68
TM6SF1-201ENST00000258909 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
TM6SF1-201ENST00000258909 IGLV9-49A0A0B4J1Y8 123 aa10.77□□□□□ -0.69
TM6SF1-201ENST00000258909 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
TM6SF1-201ENST00000258909 NPC2P61916 151 aa10.77□□□□□ -0.69
TM6SF1-201ENST00000258909 Q9BRP9 147 aa10.77□□□□□ -0.69
TM6SF1-201ENST00000258909 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.69
TM6SF1-201ENST00000258909 MOBPQ13875 183 aa10.76□□□□□ -0.69
TM6SF1-201ENST00000258909 SLC7A5P1Q8MH63 180 aa10.76□□□□□ -0.69
TM6SF1-201ENST00000258909 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
TM6SF1-201ENST00000258909 NMUP48645 174 aa10.75□□□□□ -0.69
TM6SF1-201ENST00000258909 LCE2AQ5TA79 106 aaPredicted RBP10.75□□□□□ -0.69
TM6SF1-201ENST00000258909 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
TM6SF1-201ENST00000258909 EIF4EBP3O60516 100 aaPredicted RBP10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 S100A7L2Q5SY68 101 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 Q6ZRX8 168 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 COLCA2A8K830 154 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 SPINK1P00995 79 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 SOSTDC1Q6X4U4 206 aa10.74□□□□□ -0.69
TM6SF1-201ENST00000258909 IGLV6-57P01721 117 aa10.73□□□□□ -0.69
TM6SF1-201ENST00000258909 KRTAP13-3Q3SY46 172 aa10.72□□□□□ -0.69
TM6SF1-201ENST00000258909 TRAV23DV6A0A075B6W5 121 aa10.71□□□□□ -0.69
TM6SF1-201ENST00000258909 A0A0J9YXY3 114 aa10.71□□□□□ -0.69
TM6SF1-201ENST00000258909 NDUFC2O95298 119 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms