RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 LINC01556Q5JQF7 62 aa9.46□□□□□ -0.89
ALPK3-201ENST00000258888 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.89
ALPK3-201ENST00000258888 STAB1Q9NY15 2570 aa9.46□□□□□ -0.9
ALPK3-201ENST00000258888 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
ALPK3-201ENST00000258888 MAST4O15021 2626 aa9.45□□□□□ -0.9
ALPK3-201ENST00000258888 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
ALPK3-201ENST00000258888 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
ALPK3-201ENST00000258888 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
ALPK3-201ENST00000258888 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
ALPK3-201ENST00000258888 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
ALPK3-201ENST00000258888 PRLHP81277 87 aa9.44□□□□□ -0.9
ALPK3-201ENST00000258888 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
ALPK3-201ENST00000258888 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
ALPK3-201ENST00000258888 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
ALPK3-201ENST00000258888 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
ALPK3-201ENST00000258888 Q6ZRU5 148 aa9.43□□□□□ -0.9
ALPK3-201ENST00000258888 SPINK1P00995 79 aa9.43□□□□□ -0.9
ALPK3-201ENST00000258888 H0Y9P7 68 aa9.42□□□□□ -0.9
ALPK3-201ENST00000258888 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
ALPK3-201ENST00000258888 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
ALPK3-201ENST00000258888 F8WDY8 70 aa9.39□□□□□ -0.91
ALPK3-201ENST00000258888 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
ALPK3-201ENST00000258888 LINC01561Q8N1V8 128 aa9.39□□□□□ -0.91
ALPK3-201ENST00000258888 Q9UF83 564 aa9.38□□□□□ -0.91
ALPK3-201ENST00000258888 Q8N2B8 174 aa9.38□□□□□ -0.91
ALPK3-201ENST00000258888 LINC00315P59091 139 aa9.37□□□□□ -0.91
ALPK3-201ENST00000258888 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
ALPK3-201ENST00000258888 LIMD2Q9BT23 127 aa9.35□□□□□ -0.91
ALPK3-201ENST00000258888 COL4A2P08572 1712 aa9.34□□□□□ -0.91
ALPK3-201ENST00000258888 SMCPP49901 116 aaPredicted RBP9.34□□□□□ -0.91
ALPK3-201ENST00000258888 FAM218AQ96MZ4 157 aa9.34□□□□□ -0.91
ALPK3-201ENST00000258888 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
ALPK3-201ENST00000258888 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
ALPK3-201ENST00000258888 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
ALPK3-201ENST00000258888 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
ALPK3-201ENST00000258888 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
ALPK3-201ENST00000258888 C1orf64Q8NEQ6 169 aa9.32□□□□□ -0.92
ALPK3-201ENST00000258888 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
ALPK3-201ENST00000258888 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
ALPK3-201ENST00000258888 FHL3Q13643 280 aa9.31□□□□□ -0.92
ALPK3-201ENST00000258888 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
ALPK3-201ENST00000258888 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
ALPK3-201ENST00000258888 SSBP3-AS1Q7Z2R9 100 aa9.3□□□□□ -0.92
ALPK3-201ENST00000258888 H3BS24 57 aa9.3□□□□□ -0.92
ALPK3-201ENST00000258888 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
ALPK3-201ENST00000258888 IGKV2D-30A0A075B6S6 120 aa9.28□□□□□ -0.92
ALPK3-201ENST00000258888 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
ALPK3-201ENST00000258888 FLNAP21333 2647 aaKnown RBP9.27□□□□□ -0.92
ALPK3-201ENST00000258888 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
ALPK3-201ENST00000258888 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
ALPK3-201ENST00000258888 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
ALPK3-201ENST00000258888 IGLV8-61A0A075B6I0 122 aa9.26□□□□□ -0.93
ALPK3-201ENST00000258888 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
ALPK3-201ENST00000258888 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
ALPK3-201ENST00000258888 MOBPQ13875 183 aa9.23□□□□□ -0.93
ALPK3-201ENST00000258888 CD164Q04900 197 aa9.21□□□□□ -0.94
ALPK3-201ENST00000258888 A0A1B0GU69 56 aa9.21□□□□□ -0.94
ALPK3-201ENST00000258888 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.94
ALPK3-201ENST00000258888 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
ALPK3-201ENST00000258888 Q6ZQT0 140 aa9.2□□□□□ -0.94
ALPK3-201ENST00000258888 Q6ZRX8 168 aa9.18□□□□□ -0.94
ALPK3-201ENST00000258888 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
ALPK3-201ENST00000258888 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
ALPK3-201ENST00000258888 LOC110117498A0A087WWA1 95 aa9.17□□□□□ -0.94
ALPK3-201ENST00000258888 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
ALPK3-201ENST00000258888 Q8NBF4 154 aa9.15□□□□□ -0.94
ALPK3-201ENST00000258888 ST20-AS1Q8NBB2 130 aa9.15□□□□□ -0.94
ALPK3-201ENST00000258888 ITPR3Q14573 2671 aa9.15□□□□□ -0.95
ALPK3-201ENST00000258888 LINC00476Q8WZB0 136 aa9.14□□□□□ -0.95
ALPK3-201ENST00000258888 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
ALPK3-201ENST00000258888 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
ALPK3-201ENST00000258888 FSHBP01225 129 aa9.14□□□□□ -0.95
ALPK3-201ENST00000258888 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
ALPK3-201ENST00000258888 LITAFQ99732 161 aa9.14□□□□□ -0.95
ALPK3-201ENST00000258888 PHF5AQ7RTV0 110 aaKnown RBP9.13□□□□□ -0.95
ALPK3-201ENST00000258888 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
ALPK3-201ENST00000258888 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
ALPK3-201ENST00000258888 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
ALPK3-201ENST00000258888 UNC79Q9P2D8 2635 aa9.13□□□□□ -0.95
ALPK3-201ENST00000258888 CFAP46Q8IYW2 2715 aa9.12□□□□□ -0.95
ALPK3-201ENST00000258888 HELZ2Q9BYK8 2649 aaKnown RBP9.11□□□□□ -0.95
ALPK3-201ENST00000258888 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
ALPK3-201ENST00000258888 Q8NAQ8 132 aa9.11□□□□□ -0.95
ALPK3-201ENST00000258888 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
ALPK3-201ENST00000258888 H3BNG1 76 aa9.1□□□□□ -0.95
ALPK3-201ENST00000258888 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
ALPK3-201ENST00000258888 BCE1O60756 84 aa9.09□□□□□ -0.95
ALPK3-201ENST00000258888 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
ALPK3-201ENST00000258888 A0A1B0GW54 56 aa9.08□□□□□ -0.96
ALPK3-201ENST00000258888 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
ALPK3-201ENST00000258888 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
ALPK3-201ENST00000258888 ACYP2P14621 99 aa9.08□□□□□ -0.96
ALPK3-201ENST00000258888 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
ALPK3-201ENST00000258888 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
ALPK3-201ENST00000258888 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
ALPK3-201ENST00000258888 Q6ZRP5 223 aa9.06□□□□□ -0.96
ALPK3-201ENST00000258888 RTL8CO15255 209 aa9.05□□□□□ -0.96
ALPK3-201ENST00000258888 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
ALPK3-201ENST00000258888 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
ALPK3-201ENST00000258888 KRTAP24-1Q3LI83 254 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms