RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 K7EQZ3 153 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 MRGPRG-AS1Q2M3A8 158 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 KCNQ1DNQ9H478 68 aa4.56□□□□□ -1.68
PDGFRA-201ENST00000257290 IGLV8-61A0A075B6I0 122 aa4.55□□□□□ -1.68
PDGFRA-201ENST00000257290 SPTBN2O15020 2390 aa4.55□□□□□ -1.68
PDGFRA-201ENST00000257290 IGKV2D-24A0A075B6R9 120 aa4.54□□□□□ -1.68
PDGFRA-201ENST00000257290 A0A087X002 238 aa4.54□□□□□ -1.68
PDGFRA-201ENST00000257290 MAP1BP46821 2468 aaKnown RBP4.54□□□□□ -1.68
PDGFRA-201ENST00000257290 RIF1Q5UIP0 2472 aaKnown RBP4.54□□□□□ -1.68
PDGFRA-201ENST00000257290 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 SPINK1P00995 79 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 SPART-AS1P0CW21 52 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 CACNA1GO43497 2377 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 MUC6Q6W4X9 2439 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 APC2O95996 2303 aa4.53□□□□□ -1.68
PDGFRA-201ENST00000257290 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
PDGFRA-201ENST00000257290 C10orf99Q6UWK7 81 aa4.52□□□□□ -1.69
PDGFRA-201ENST00000257290 TLX1NBP0CAT3 122 aa4.52□□□□□ -1.69
PDGFRA-201ENST00000257290 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
PDGFRA-201ENST00000257290 MALRD1Q5VYJ5 2156 aa4.52□□□□□ -1.69
PDGFRA-201ENST00000257290 A0A096LNI7 61 aa4.51□□□□□ -1.69
PDGFRA-201ENST00000257290 ROMO1P60602 79 aa4.51□□□□□ -1.69
PDGFRA-201ENST00000257290 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
PDGFRA-201ENST00000257290 PTPRQQ9UMZ3 2332 aa4.51□□□□□ -1.69
PDGFRA-201ENST00000257290 PRO0255Q9UI72 69 aa4.51□□□□□ -1.69
PDGFRA-201ENST00000257290 MUC4Q99102 2169 aa4.5□□□□□ -1.69
PDGFRA-201ENST00000257290 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
PDGFRA-201ENST00000257290 EGFEM1PQ0D2K5 195 aa4.5□□□□□ -1.69
PDGFRA-201ENST00000257290 CREBBPQ92793 2442 aa4.5□□□□□ -1.69
PDGFRA-201ENST00000257290 RAI1Q7Z5J4 1906 aaPredicted RBP4.5□□□□□ -1.69
PDGFRA-201ENST00000257290 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 PRLHP81277 87 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 F8W735 103 aaPredicted RBP4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 M0R2N4 97 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 COL6A6A6NMZ7 2263 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 IGLV1-51P01701 117 aa4.49□□□□□ -1.69
PDGFRA-201ENST00000257290 DEFB135Q30KP9 77 aa4.48□□□□□ -1.69
PDGFRA-201ENST00000257290 GOLGB1Q14789 3259 aaKnown RBP4.48□□□□□ -1.69
PDGFRA-201ENST00000257290 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
PDGFRA-201ENST00000257290 C9orf163Q8N9P6 203 aa4.48□□□□□ -1.69
PDGFRA-201ENST00000257290 ABCA4P78363 2273 aa4.47□□□□□ -1.69
PDGFRA-201ENST00000257290 A8MU10 97 aa4.47□□□□□ -1.69
PDGFRA-201ENST00000257290 TTC28Q96AY4 2481 aa4.47□□□□□ -1.69
PDGFRA-201ENST00000257290 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
PDGFRA-201ENST00000257290 ODF3L2Q3SX64 289 aa4.47□□□□□ -1.69
PDGFRA-201ENST00000257290 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
PDGFRA-201ENST00000257290 NAV3Q8IVL0 2385 aa4.46□□□□□ -1.7
PDGFRA-201ENST00000257290 GVINP1Q7Z2Y8 2422 aa4.45□□□□□ -1.7
PDGFRA-201ENST00000257290 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
PDGFRA-201ENST00000257290 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
PDGFRA-201ENST00000257290 J3QL48 77 aa4.45□□□□□ -1.7
PDGFRA-201ENST00000257290 IGLV6-57P01721 117 aa4.45□□□□□ -1.7
PDGFRA-201ENST00000257290 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 Q6ZSN1 163 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 KLK9Q2XQG4 91 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 SRCAPQ6ZRS2 3230 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 COL27A1Q8IZC6 1860 aaPredicted RBP4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 ATRXP46100 2492 aa4.44□□□□□ -1.7
PDGFRA-201ENST00000257290 ROS1P08922 2347 aa4.43□□□□□ -1.7
PDGFRA-201ENST00000257290 A0A1B0GUV1 79 aa4.43□□□□□ -1.7
PDGFRA-201ENST00000257290 SMR3AQ99954 134 aa4.43□□□□□ -1.7
PDGFRA-201ENST00000257290 DEFB4AO15263 64 aa4.43□□□□□ -1.7
PDGFRA-201ENST00000257290 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
PDGFRA-201ENST00000257290 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
PDGFRA-201ENST00000257290 ANKHD1Q8IWZ3 2542 aaKnown RBP4.41□□□□□ -1.7
PDGFRA-201ENST00000257290 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
PDGFRA-201ENST00000257290 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
PDGFRA-201ENST00000257290 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
PDGFRA-201ENST00000257290 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
PDGFRA-201ENST00000257290 FAM229AH3BQW9 127 aa4.39□□□□□ -1.71
PDGFRA-201ENST00000257290 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
PDGFRA-201ENST00000257290 LINC00528Q8N1L1 170 aa4.39□□□□□ -1.71
PDGFRA-201ENST00000257290 HRES1P13985 223 aa4.38□□□□□ -1.71
PDGFRA-201ENST00000257290 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
PDGFRA-201ENST00000257290 Q6ZR54 194 aa4.38□□□□□ -1.71
PDGFRA-201ENST00000257290 DSCR10P59022 87 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 Q6ZRX8 168 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 LELP1Q5T871 98 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
PDGFRA-201ENST00000257290 C2CD3Q4AC94 2353 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 PCNX1Q96RV3 2341 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 UTRNP46939 3433 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 A0A096LNT2 108 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 TNP2Q05952 138 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 C20orf166-AS1Q96NR2 134 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 C14orf177Q52M58 125 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 C19orf73Q9NVV2 129 aa4.36□□□□□ -1.71
PDGFRA-201ENST00000257290 WNK1Q9H4A3 2382 aa4.35□□□□□ -1.71
PDGFRA-201ENST00000257290 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
PDGFRA-201ENST00000257290 SPTAN1Q13813 2472 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms