RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RPL24P83731 157 aaKnown RBP7.76□□□□□ -1.17
VPREB3-201ENST00000248948 LINC00167Q96N53 147 aa7.76□□□□□ -1.17
VPREB3-201ENST00000248948 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 BCE1O60756 84 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 IGKCP01834 107 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 VPREB1P12018 145 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 NDUFA12Q9UI09 145 aa7.75□□□□□ -1.17
VPREB3-201ENST00000248948 MYMXA0A1B0GTQ4 84 aa7.74□□□□□ -1.17
VPREB3-201ENST00000248948 LEPROTO15243 131 aa7.74□□□□□ -1.17
VPREB3-201ENST00000248948 ZNF861PO60384 105 aa7.74□□□□□ -1.17
VPREB3-201ENST00000248948 LINC00158P58513 81 aa7.74□□□□□ -1.17
VPREB3-201ENST00000248948 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
VPREB3-201ENST00000248948 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
VPREB3-201ENST00000248948 GAGE10A6NGK3 116 aa7.73□□□□□ -1.17
VPREB3-201ENST00000248948 NMUP48645 174 aa7.73□□□□□ -1.17
VPREB3-201ENST00000248948 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
VPREB3-201ENST00000248948 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
VPREB3-201ENST00000248948 RPL37AP8A6NKH3 93 aa7.72□□□□□ -1.17
VPREB3-201ENST00000248948 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
VPREB3-201ENST00000248948 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
VPREB3-201ENST00000248948 PMCHL2Q9BQD1 86 aa7.72□□□□□ -1.17
VPREB3-201ENST00000248948 J3QQQ9 107 aa7.71□□□□□ -1.18
VPREB3-201ENST00000248948 ATP6V1G1O75348 118 aa7.71□□□□□ -1.18
VPREB3-201ENST00000248948 SMIM13P0DJ93 91 aa7.71□□□□□ -1.18
VPREB3-201ENST00000248948 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 IGKV2-28A0A075B6P5 120 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 IGKV2D-28P01615 120 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 KRTAP1-4P0C5Y4 121 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 Q8NDZ9 215 aa7.7□□□□□ -1.18
VPREB3-201ENST00000248948 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 E9PLD3 99 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 LGALS3P17931 250 aaKnown RBP7.69□□□□□ -1.18
VPREB3-201ENST00000248948 S100A1P23297 94 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 LINC01545Q5VT33 79 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 PET117Q6UWS5 81 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
VPREB3-201ENST00000248948 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
VPREB3-201ENST00000248948 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
VPREB3-201ENST00000248948 UBE2AP49459 152 aa7.67□□□□□ -1.18
VPREB3-201ENST00000248948 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
VPREB3-201ENST00000248948 TMEM126AQ9H061 195 aa7.67□□□□□ -1.18
VPREB3-201ENST00000248948 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
VPREB3-201ENST00000248948 M0R378 163 aa7.66□□□□□ -1.18
VPREB3-201ENST00000248948 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
VPREB3-201ENST00000248948 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
VPREB3-201ENST00000248948 C3orf79P0CE67 100 aa7.65□□□□□ -1.18
VPREB3-201ENST00000248948 C20orf202A1L168 122 aa7.64□□□□□ -1.19
VPREB3-201ENST00000248948 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
VPREB3-201ENST00000248948 PRYO14603 147 aa7.64□□□□□ -1.19
VPREB3-201ENST00000248948 MIEN1Q9BRT3 115 aa7.64□□□□□ -1.19
VPREB3-201ENST00000248948 NCR3O14931 201 aa7.63□□□□□ -1.19
VPREB3-201ENST00000248948 AKR1D1P51857 326 aa7.63□□□□□ -1.19
VPREB3-201ENST00000248948 KRTDAPP60985 99 aa7.63□□□□□ -1.19
VPREB3-201ENST00000248948 PRLHP81277 87 aa7.63□□□□□ -1.19
VPREB3-201ENST00000248948 FAM19A1Q7Z5A9 133 aa7.63□□□□□ -1.19
VPREB3-201ENST00000248948 A0A0J9YXY3 114 aa7.62□□□□□ -1.19
VPREB3-201ENST00000248948 TRBV10-2A0A0K0K1G8 114 aa7.62□□□□□ -1.19
VPREB3-201ENST00000248948 DAND5Q8N907 189 aa7.62□□□□□ -1.19
VPREB3-201ENST00000248948 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
VPREB3-201ENST00000248948 NDUFC2O95298 119 aa7.61□□□□□ -1.19
VPREB3-201ENST00000248948 S100A12P80511 92 aa7.61□□□□□ -1.19
VPREB3-201ENST00000248948 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 TIMM17BO60830 172 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 SPRR1AP35321 89 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 FAM229BQ4G0N7 80 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 KCNQ1DNQ9H478 68 aa7.6□□□□□ -1.19
VPREB3-201ENST00000248948 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
VPREB3-201ENST00000248948 A0A087X002 238 aa7.58□□□□□ -1.2
VPREB3-201ENST00000248948 ZNF815PA8K554 130 aa7.58□□□□□ -1.2
VPREB3-201ENST00000248948 CRYGAP11844 174 aa7.58□□□□□ -1.2
VPREB3-201ENST00000248948 DDTP30046 118 aa7.57□□□□□ -1.2
VPREB3-201ENST00000248948 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
VPREB3-201ENST00000248948 LITAFQ99732 161 aa7.57□□□□□ -1.2
VPREB3-201ENST00000248948 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
VPREB3-201ENST00000248948 S100A2P29034 98 aa7.56□□□□□ -1.2
VPREB3-201ENST00000248948 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
VPREB3-201ENST00000248948 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
VPREB3-201ENST00000248948 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
VPREB3-201ENST00000248948 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
VPREB3-201ENST00000248948 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
VPREB3-201ENST00000248948 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
VPREB3-201ENST00000248948 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
VPREB3-201ENST00000248948 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
VPREB3-201ENST00000248948 S100A6P06703 90 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 NPC2P61916 151 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 SNRPEP62304 92 aaKnown RBP7.54□□□□□ -1.2
VPREB3-201ENST00000248948 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 TYMSOSQ8TAI1 123 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 CBY1Q9Y3M2 126 aa7.54□□□□□ -1.2
VPREB3-201ENST00000248948 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
VPREB3-201ENST00000248948 LRP2P98164 4655 aa7.53□□□□□ -1.2
VPREB3-201ENST00000248948 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
VPREB3-201ENST00000248948 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
VPREB3-201ENST00000248948 TRAV23DV6A0A075B6W5 121 aa7.52□□□□□ -1.21
VPREB3-201ENST00000248948 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
VPREB3-201ENST00000248948 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms