RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TRIAP1O43715 76 aa9.28□□□□□ -0.92
SDF2-201ENST00000247020 SCGB1C2P0DMR2 95 aa9.28□□□□□ -0.92
SDF2-201ENST00000247020 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.92
SDF2-201ENST00000247020 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
SDF2-201ENST00000247020 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
SDF2-201ENST00000247020 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.93
SDF2-201ENST00000247020 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
SDF2-201ENST00000247020 SLPIP03973 132 aa9.26□□□□□ -0.93
SDF2-201ENST00000247020 Q6ZR54 194 aa9.25□□□□□ -0.93
SDF2-201ENST00000247020 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
SDF2-201ENST00000247020 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
SDF2-201ENST00000247020 Q6ZRP5 223 aa9.24□□□□□ -0.93
SDF2-201ENST00000247020 LECT2O14960 151 aa9.24□□□□□ -0.93
SDF2-201ENST00000247020 TCL1BO95988 128 aa9.24□□□□□ -0.93
SDF2-201ENST00000247020 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 LRCOL1A6NCL2 159 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 WFDC2Q14508 124 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 PKIGQ9Y2B9 76 aa9.23□□□□□ -0.93
SDF2-201ENST00000247020 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
SDF2-201ENST00000247020 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
SDF2-201ENST00000247020 F8W1H4 67 aa9.21□□□□□ -0.93
SDF2-201ENST00000247020 H3BMG7 143 aa9.21□□□□□ -0.93
SDF2-201ENST00000247020 VPREB1P12018 145 aa9.21□□□□□ -0.93
SDF2-201ENST00000247020 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.93
SDF2-201ENST00000247020 Q8NDZ9 215 aa9.21□□□□□ -0.93
SDF2-201ENST00000247020 SMIM11BQ8TCY0 68 aa9.21□□□□□ -0.93
SDF2-201ENST00000247020 GAGE2EQ4V326 116 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 GAGE2DQ9UEU5 116 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 CBY1Q9Y3M2 126 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 H0YGX0 51 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 M0R2N4 97 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 NCR3O14931 201 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
SDF2-201ENST00000247020 M0R378 163 aa9.19□□□□□ -0.94
SDF2-201ENST00000247020 LST1O00453 97 aa9.19□□□□□ -0.94
SDF2-201ENST00000247020 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
SDF2-201ENST00000247020 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
SDF2-201ENST00000247020 LY6G6CO95867 125 aa9.18□□□□□ -0.94
SDF2-201ENST00000247020 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
SDF2-201ENST00000247020 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
SDF2-201ENST00000247020 LINC01620Q4KN68 170 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 M0QXV9 152 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 TRACP01848 142 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 Q8N814 137 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
SDF2-201ENST00000247020 TGP01266 2768 aa9.15□□□□□ -0.94
SDF2-201ENST00000247020 DNAH10Q8IVF4 4471 aa9.15□□□□□ -0.94
SDF2-201ENST00000247020 C16orf90A8MZG2 172 aa9.15□□□□□ -0.95
SDF2-201ENST00000247020 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.95
SDF2-201ENST00000247020 LINC01600Q96MT4 127 aa9.15□□□□□ -0.95
SDF2-201ENST00000247020 ALMS1Q8TCU4 4167 aa9.15□□□□□ -0.95
SDF2-201ENST00000247020 A0A087WTM6 91 aa9.14□□□□□ -0.95
SDF2-201ENST00000247020 A0A1B0GX51 115 aa9.14□□□□□ -0.95
SDF2-201ENST00000247020 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
SDF2-201ENST00000247020 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
SDF2-201ENST00000247020 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
SDF2-201ENST00000247020 TRAV23DV6A0A075B6W5 121 aa9.12□□□□□ -0.95
SDF2-201ENST00000247020 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
SDF2-201ENST00000247020 C9JAW5 83 aa9.12□□□□□ -0.95
SDF2-201ENST00000247020 H3BT86 120 aa9.12□□□□□ -0.95
SDF2-201ENST00000247020 SLC25A20O43772 301 aa9.11□□□□□ -0.95
SDF2-201ENST00000247020 C6orf99Q4VX62 202 aa9.11□□□□□ -0.95
SDF2-201ENST00000247020 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
SDF2-201ENST00000247020 A0A096LNI7 61 aa9.1□□□□□ -0.95
SDF2-201ENST00000247020 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
SDF2-201ENST00000247020 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
SDF2-201ENST00000247020 SNCGO76070 127 aa9.09□□□□□ -0.95
SDF2-201ENST00000247020 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
SDF2-201ENST00000247020 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
SDF2-201ENST00000247020 ZNF73O43830 326 aaPredicted RBP9.08□□□□□ -0.96
SDF2-201ENST00000247020 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
SDF2-201ENST00000247020 KMT2AQ03164 3969 aa9.08□□□□□ -0.96
SDF2-201ENST00000247020 DNAL4O96015 105 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 MTURNQ8N3F0 131 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 C22orf24Q9Y442 160 aa9.07□□□□□ -0.96
SDF2-201ENST00000247020 A0A087WYN8 130 aa9.06□□□□□ -0.96
SDF2-201ENST00000247020 PRYO14603 147 aa9.06□□□□□ -0.96
SDF2-201ENST00000247020 MRPL55Q7Z7F7 128 aaKnown RBP9.06□□□□□ -0.96
SDF2-201ENST00000247020 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
SDF2-201ENST00000247020 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
SDF2-201ENST00000247020 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
SDF2-201ENST00000247020 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
SDF2-201ENST00000247020 LINC00575Q6W349 94 aa9.05□□□□□ -0.96
SDF2-201ENST00000247020 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
SDF2-201ENST00000247020 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
SDF2-201ENST00000247020 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
SDF2-201ENST00000247020 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
SDF2-201ENST00000247020 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
SDF2-201ENST00000247020 RTL8CO15255 209 aa9.03□□□□□ -0.96
SDF2-201ENST00000247020 COX7BP24311 80 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms