RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 EP400Q96L91 3159 aa5.1□□□□□ -1.59
SSR1-201ENST00000244763 IGLV5-39A0A0G2JS06 123 aa5.1□□□□□ -1.59
SSR1-201ENST00000244763 LINC00167Q96N53 147 aa5.1□□□□□ -1.59
SSR1-201ENST00000244763 H3BPC8 53 aa5.1□□□□□ -1.59
SSR1-201ENST00000244763 LINC01546A6NGU7 62 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 NBDYA0A0U1RRE5 68 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 LINC00313P59037 77 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 MOBPQ13875 183 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 PCOTHQ58A44 107 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 C7orf65Q6ZTY9 151 aa5.09□□□□□ -1.59
SSR1-201ENST00000244763 SPACA4Q8TDM5 124 aa5.08□□□□□ -1.6
SSR1-201ENST00000244763 Q8NBF4 154 aa5.08□□□□□ -1.6
SSR1-201ENST00000244763 C1orf64Q8NEQ6 169 aa5.08□□□□□ -1.6
SSR1-201ENST00000244763 RTL8CO15255 209 aa5.08□□□□□ -1.6
SSR1-201ENST00000244763 KRTAP24-1Q3LI83 254 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 COL4A2P08572 1712 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 PCSK5Q92824 1860 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 LINC00315P59091 139 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 C1orf195Q5TG92 126 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
SSR1-201ENST00000244763 FLNBO75369 2602 aaKnown RBP5.06□□□□□ -1.6
SSR1-201ENST00000244763 CCDC179H3BU77 68 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 SPINK1P00995 79 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 DEFB116Q30KQ4 102 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 A0A096LNJ9 63 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 RETNLBQ9BQ08 111 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 C6orf48Q9UBA6 75 aa5.06□□□□□ -1.6
SSR1-201ENST00000244763 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
SSR1-201ENST00000244763 DNAH10OSP0CZ25 163 aa5.05□□□□□ -1.6
SSR1-201ENST00000244763 LINC00310P59036 64 aa5.05□□□□□ -1.6
SSR1-201ENST00000244763 GVQW2A0A096LPI5 108 aaPredicted RBP5.05□□□□□ -1.6
SSR1-201ENST00000244763 C8orf87E5RJ46 101 aa5.05□□□□□ -1.6
SSR1-201ENST00000244763 LINC00846Q9NV44 126 aa5.05□□□□□ -1.6
SSR1-201ENST00000244763 A0A1B0GU69 56 aa5.05□□□□□ -1.6
SSR1-201ENST00000244763 Q8NAQ8 132 aa5.04□□□□□ -1.6
SSR1-201ENST00000244763 A8MTW9 85 aa5.04□□□□□ -1.6
SSR1-201ENST00000244763 SPATA3Q8NHX4 192 aa5.04□□□□□ -1.6
SSR1-201ENST00000244763 SPAG11AQ6PDA7 123 aa5.04□□□□□ -1.6
SSR1-201ENST00000244763 ANKRD17O75179 2603 aaKnown RBP5.04□□□□□ -1.6
SSR1-201ENST00000244763 ATP11AUNQ6ZP68 121 aa5.04□□□□□ -1.6
SSR1-201ENST00000244763 Q6ZRX8 168 aa5.03□□□□□ -1.6
SSR1-201ENST00000244763 A0A087WVE0 104 aa5.03□□□□□ -1.6
SSR1-201ENST00000244763 J3QL48 77 aa5.03□□□□□ -1.6
SSR1-201ENST00000244763 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
SSR1-201ENST00000244763 LINC00588Q9Y4M8 146 aa5.03□□□□□ -1.6
SSR1-201ENST00000244763 LINC00476Q8WZB0 136 aa5.02□□□□□ -1.61
SSR1-201ENST00000244763 KLK9Q2XQG4 91 aa5.02□□□□□ -1.61
SSR1-201ENST00000244763 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
SSR1-201ENST00000244763 RPL37AP61513 92 aaKnown RBP5.02□□□□□ -1.61
SSR1-201ENST00000244763 LOC110117498A0A087WWA1 95 aa5.01□□□□□ -1.61
SSR1-201ENST00000244763 ACANP16112 2415 aa5.01□□□□□ -1.61
SSR1-201ENST00000244763 MAST4O15021 2626 aa5□□□□□ -1.61
SSR1-201ENST00000244763 EPM2AB3EWF7 344 aa5□□□□□ -1.61
SSR1-201ENST00000244763 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
SSR1-201ENST00000244763 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
SSR1-201ENST00000244763 USP24Q9UPU5 2620 aa5□□□□□ -1.61
SSR1-201ENST00000244763 SMIM29Q86T20 159 aa5□□□□□ -1.61
SSR1-201ENST00000244763 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
SSR1-201ENST00000244763 LOC101927531A0A1B0GV80 90 aa4.98□□□□□ -1.61
SSR1-201ENST00000244763 LINC00336Q6ZUF6 198 aa4.98□□□□□ -1.61
SSR1-201ENST00000244763 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SSR1-201ENST00000244763 Q6ZQT0 140 aa4.97□□□□□ -1.61
SSR1-201ENST00000244763 Q96NJ1 140 aa4.97□□□□□ -1.61
SSR1-201ENST00000244763 PRRC2CQ9Y520 2896 aaKnown RBP4.96□□□□□ -1.62
SSR1-201ENST00000244763 A8MWP4 228 aa4.96□□□□□ -1.62
SSR1-201ENST00000244763 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
SSR1-201ENST00000244763 CHTF8P0CG12 524 aa4.96□□□□□ -1.62
SSR1-201ENST00000244763 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
SSR1-201ENST00000244763 ST20-AS1Q8NBB2 130 aa4.94□□□□□ -1.62
SSR1-201ENST00000244763 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
SSR1-201ENST00000244763 ZNF861PO60384 105 aa4.94□□□□□ -1.62
SSR1-201ENST00000244763 CENPEQ02224 2701 aa4.93□□□□□ -1.62
SSR1-201ENST00000244763 PLA2G2DQ9UNK4 145 aa4.93□□□□□ -1.62
SSR1-201ENST00000244763 ATRQ13535 2644 aa4.93□□□□□ -1.62
SSR1-201ENST00000244763 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
SSR1-201ENST00000244763 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
SSR1-201ENST00000244763 CSNK1G2-AS1Q8NCQ2 148 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 CENPFP49454 3210 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 K7EIL1 84 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
SSR1-201ENST00000244763 TLX1NBP0CAT3 122 aa4.91□□□□□ -1.62
SSR1-201ENST00000244763 PRR34Q9NV39 138 aa4.91□□□□□ -1.62
SSR1-201ENST00000244763 TM2D3Q9BRN9 247 aa4.9□□□□□ -1.62
SSR1-201ENST00000244763 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.62
SSR1-201ENST00000244763 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
SSR1-201ENST00000244763 C9orf163Q8N9P6 203 aa4.89□□□□□ -1.63
SSR1-201ENST00000244763 FAM218AQ96MZ4 157 aa4.89□□□□□ -1.63
SSR1-201ENST00000244763 A0A087WTM6 91 aa4.89□□□□□ -1.63
SSR1-201ENST00000244763 Q9UF83 564 aa4.89□□□□□ -1.63
SSR1-201ENST00000244763 CYP4F30PQ9H0H9 118 aa4.87□□□□□ -1.63
SSR1-201ENST00000244763 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
SSR1-201ENST00000244763 LINC00528Q8N1L1 170 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms