RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TMEM256-PLSCR3K7ERE1 68 aa14.8□□□□□ -0.04
RNF39-201ENST00000244360 SPAG11BQ08648 103 aa14.8□□□□□ -0.04
RNF39-201ENST00000244360 C9orf116Q5BN46 136 aaPredicted RBP14.78□□□□□ -0.04
RNF39-201ENST00000244360 LINC00846Q9NV44 126 aa14.78□□□□□ -0.04
RNF39-201ENST00000244360 ATOX1O00244 68 aa14.78□□□□□ -0.04
RNF39-201ENST00000244360 KPRPQ5T749 579 aaPredicted RBP14.78□□□□□ -0.04
RNF39-201ENST00000244360 CMYA5Q8N3K9 4069 aa14.77□□□□□ -0.04
RNF39-201ENST00000244360 CCKP06307 115 aa14.77□□□□□ -0.04
RNF39-201ENST00000244360 A0A0J9YWU9 116 aa14.77□□□□□ -0.05
RNF39-201ENST00000244360 C3orf56Q8N813 242 aa14.77□□□□□ -0.05
RNF39-201ENST00000244360 Q6ZTC4 211 aa14.76□□□□□ -0.05
RNF39-201ENST00000244360 PRR3P79522 188 aaKnown RBP14.76□□□□□ -0.05
RNF39-201ENST00000244360 S100A7L2Q5SY68 101 aa14.76□□□□□ -0.05
RNF39-201ENST00000244360 C10orf25Q5T742 122 aa14.76□□□□□ -0.05
RNF39-201ENST00000244360 UNQ6190/PRO20217Q6UXQ8 127 aa14.75□□□□□ -0.05
RNF39-201ENST00000244360 C6orf223Q8N319 242 aa14.75□□□□□ -0.05
RNF39-201ENST00000244360 C9orf153Q5TBE3 101 aa14.74□□□□□ -0.05
RNF39-201ENST00000244360 LINC00526Q96FQ7 95 aa14.74□□□□□ -0.05
RNF39-201ENST00000244360 GVQW2A0A096LPI5 108 aaPredicted RBP14.73□□□□□ -0.05
RNF39-201ENST00000244360 CYSRT1A8MQ03 144 aa14.73□□□□□ -0.05
RNF39-201ENST00000244360 WFDC10BQ8IUB3 73 aa14.73□□□□□ -0.05
RNF39-201ENST00000244360 DNAH3Q8TD57 4116 aa14.72□□□□□ -0.05
RNF39-201ENST00000244360 COX7CP15954 63 aa14.72□□□□□ -0.05
RNF39-201ENST00000244360 Q8NDZ9 215 aa14.72□□□□□ -0.05
RNF39-201ENST00000244360 FLNBO75369 2602 aaKnown RBP14.7□□□□□ -0.06
RNF39-201ENST00000244360 RPL18AQ02543 176 aaKnown RBP14.7□□□□□ -0.06
RNF39-201ENST00000244360 C6orf99Q4VX62 202 aa14.7□□□□□ -0.06
RNF39-201ENST00000244360 FBN1P35555 2871 aaKnown RBP14.7□□□□□ -0.06
RNF39-201ENST00000244360 IGKV3D-7A0A0C4DH55 119 aa14.69□□□□□ -0.06
RNF39-201ENST00000244360 ATP5EP2Q5VTU8 51 aa14.69□□□□□ -0.06
RNF39-201ENST00000244360 KRTAP26-1Q6PEX3 210 aa14.68□□□□□ -0.06
RNF39-201ENST00000244360 LINC00575Q6W349 94 aa14.68□□□□□ -0.06
RNF39-201ENST00000244360 SVIPQ8NHG7 77 aa14.68□□□□□ -0.06
RNF39-201ENST00000244360 STAB1Q9NY15 2570 aa14.67□□□□□ -0.06
RNF39-201ENST00000244360 ANK2Q01484 3957 aa14.67□□□□□ -0.06
RNF39-201ENST00000244360 C2orf48Q96LS8 159 aa14.66□□□□□ -0.06
RNF39-201ENST00000244360 PKD1L1Q8TDX9 2849 aa14.66□□□□□ -0.06
RNF39-201ENST00000244360 ESRGQ1W209 222 aa14.65□□□□□ -0.06
RNF39-201ENST00000244360 C6orf48Q9UBA6 75 aa14.65□□□□□ -0.06
RNF39-201ENST00000244360 H3BQ85 93 aa14.64□□□□□ -0.07
RNF39-201ENST00000244360 CRYGAP11844 174 aa14.64□□□□□ -0.07
RNF39-201ENST00000244360 hADV29S1A0JD25 119 aa14.63□□□□□ -0.07
RNF39-201ENST00000244360 IGLV6-57P01721 117 aa14.63□□□□□ -0.07
RNF39-201ENST00000244360 SMIM20Q8N5G0 67 aa14.63□□□□□ -0.07
RNF39-201ENST00000244360 TENM3Q9P273 2699 aa14.63□□□□□ -0.07
RNF39-201ENST00000244360 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
RNF39-201ENST00000244360 C11orf45Q8TAV5 145 aa14.62□□□□□ -0.07
RNF39-201ENST00000244360 ZNF561-AS1K7EIQ3 104 aa14.61□□□□□ -0.07
RNF39-201ENST00000244360 LINC01556Q5JQF7 62 aa14.6□□□□□ -0.07
RNF39-201ENST00000244360 MAST4O15021 2626 aa14.59□□□□□ -0.07
RNF39-201ENST00000244360 SERP2Q8N6R1 65 aa14.58□□□□□ -0.07
RNF39-201ENST00000244360 UBL5Q9BZL1 73 aa14.58□□□□□ -0.07
RNF39-201ENST00000244360 LOC110117498A0A087WWA1 95 aa14.58□□□□□ -0.08
RNF39-201ENST00000244360 RBM3P98179 157 aaKnown RBP14.58□□□□□ -0.08
RNF39-201ENST00000244360 TRBV10-3A0A0K0K1G6 114 aa14.57□□□□□ -0.08
RNF39-201ENST00000244360 USP17L23D6RBM5 183 aa14.57□□□□□ -0.08
RNF39-201ENST00000244360 A0A087WVE0 104 aa14.57□□□□□ -0.08
RNF39-201ENST00000244360 C15orf56Q8N910 161 aa14.57□□□□□ -0.08
RNF39-201ENST00000244360 HIGD2BQ4VC39 106 aa14.56□□□□□ -0.08
RNF39-201ENST00000244360 Q6ZQT0 140 aa14.55□□□□□ -0.08
RNF39-201ENST00000244360 CAMK2N2Q96S95 79 aa14.55□□□□□ -0.08
RNF39-201ENST00000244360 DIRC1Q969H9 104 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 TRAV23DV6A0A075B6W5 121 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 GHRHP01286 108 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 PDE6GP18545 87 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 C1orf43Q9BWL3 253 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 LAMTOR3Q9UHA4 124 aa14.53□□□□□ -0.08
RNF39-201ENST00000244360 XAGE1AQ9HD64 81 aa14.51□□□□□ -0.09
RNF39-201ENST00000244360 DNAH10OSP0CZ25 163 aa14.51□□□□□ -0.09
RNF39-201ENST00000244360 Q6ZRU5 148 aa14.51□□□□□ -0.09
RNF39-201ENST00000244360 F8WDY8 70 aa14.5□□□□□ -0.09
RNF39-201ENST00000244360 BAHCC1Q9P281 2608 aa14.49□□□□□ -0.09
RNF39-201ENST00000244360 TRBV7-6A0A0J9YX20 115 aa14.49□□□□□ -0.09
RNF39-201ENST00000244360 Q6ZQY7 126 aa14.49□□□□□ -0.09
RNF39-201ENST00000244360 DSCR8Q96T75 97 aa14.49□□□□□ -0.09
RNF39-201ENST00000244360 TM2D3Q9BRN9 247 aa14.49□□□□□ -0.09
RNF39-201ENST00000244360 TRAV10A0A0B4J240 114 aa14.48□□□□□ -0.09
RNF39-201ENST00000244360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.47□□□□□ -0.09
RNF39-201ENST00000244360 VPREB1P12018 145 aa14.47□□□□□ -0.09
RNF39-201ENST00000244360 NDUFC2-KCTD14E9PQ53 114 aa14.46□□□□□ -0.09
RNF39-201ENST00000244360 UPK3BQ9BT76 320 aa14.46□□□□□ -0.09
RNF39-201ENST00000244360 NOTCH1P46531 2555 aa14.46□□□□□ -0.09
RNF39-201ENST00000244360 IGKV2D-24A0A075B6R9 120 aa14.46□□□□□ -0.1
RNF39-201ENST00000244360 ZNF73O43830 326 aaPredicted RBP14.46□□□□□ -0.1
RNF39-201ENST00000244360 COX7BP24311 80 aa14.45□□□□□ -0.1
RNF39-201ENST00000244360 ELOF1P60002 83 aaKnown RBP14.43□□□□□ -0.1
RNF39-201ENST00000244360 TMEM258P61165 79 aa14.43□□□□□ -0.1
RNF39-201ENST00000244360 K7EIL1 84 aa14.42□□□□□ -0.1
RNF39-201ENST00000244360 PRB2P02812 416 aaPredicted RBP14.42□□□□□ -0.1
RNF39-201ENST00000244360 FAM19A1Q7Z5A9 133 aa14.42□□□□□ -0.1
RNF39-201ENST00000244360 COL6A5A8TX70 2615 aa14.41□□□□□ -0.1
RNF39-201ENST00000244360 J3KT08 172 aa14.41□□□□□ -0.1
RNF39-201ENST00000244360 M0R378 163 aa14.41□□□□□ -0.1
RNF39-201ENST00000244360 BCE1O60756 84 aa14.41□□□□□ -0.1
RNF39-201ENST00000244360 LINC00588Q9Y4M8 146 aa14.41□□□□□ -0.1
RNF39-201ENST00000244360 SYCNQ0VAF6 134 aa14.39□□□□□ -0.11
RNF39-201ENST00000244360 HUWE1Q7Z6Z7 4374 aaKnown RBP14.39□□□□□ -0.11
RNF39-201ENST00000244360 Q6ZRP5 223 aa14.38□□□□□ -0.11
RNF39-201ENST00000244360 RPS28P62857 69 aaKnown RBP14.38□□□□□ -0.11
RNF39-201ENST00000244360 Q6ZVQ6 151 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms