RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 Q6JHZ5 121 aa9.76□□□□□ -0.85
HIF3A-202ENST00000244303 LINC00167Q96N53 147 aa9.76□□□□□ -0.85
HIF3A-202ENST00000244303 Q8N814 137 aa9.76□□□□□ -0.85
HIF3A-202ENST00000244303 CRYGAP11844 174 aa9.75□□□□□ -0.85
HIF3A-202ENST00000244303 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
HIF3A-202ENST00000244303 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
HIF3A-202ENST00000244303 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
HIF3A-202ENST00000244303 KLK12Q9UKR0 248 aa9.75□□□□□ -0.85
HIF3A-202ENST00000244303 A0A087WVE0 104 aa9.74□□□□□ -0.85
HIF3A-202ENST00000244303 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
HIF3A-202ENST00000244303 C6orf99Q4VX62 202 aa9.73□□□□□ -0.85
HIF3A-202ENST00000244303 J3KT08 172 aa9.72□□□□□ -0.85
HIF3A-202ENST00000244303 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
HIF3A-202ENST00000244303 CYSRT1A8MQ03 144 aa9.72□□□□□ -0.85
HIF3A-202ENST00000244303 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
HIF3A-202ENST00000244303 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
HIF3A-202ENST00000244303 ENHOQ6UWT2 76 aa9.71□□□□□ -0.85
HIF3A-202ENST00000244303 F8P00451 2351 aa9.71□□□□□ -0.85
HIF3A-202ENST00000244303 TMEM256-PLSCR3K7ERE1 68 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 CCKP06307 115 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 A0A0J9YWU9 116 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
HIF3A-202ENST00000244303 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
HIF3A-202ENST00000244303 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
HIF3A-202ENST00000244303 JMJD7-PLA2G4BH0Y9G9 81 aa9.68□□□□□ -0.86
HIF3A-202ENST00000244303 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
HIF3A-202ENST00000244303 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
HIF3A-202ENST00000244303 CYSTM1Q9H1C7 97 aa9.67□□□□□ -0.86
HIF3A-202ENST00000244303 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
HIF3A-202ENST00000244303 IGLV6-57P01721 117 aa9.65□□□□□ -0.86
HIF3A-202ENST00000244303 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-202ENST00000244303 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.87
HIF3A-202ENST00000244303 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.87
HIF3A-202ENST00000244303 RETNQ9HD89 108 aa9.65□□□□□ -0.87
HIF3A-202ENST00000244303 TMEM258P61165 79 aa9.64□□□□□ -0.87
HIF3A-202ENST00000244303 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
HIF3A-202ENST00000244303 ANK2Q01484 3957 aa9.63□□□□□ -0.87
HIF3A-202ENST00000244303 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
HIF3A-202ENST00000244303 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
HIF3A-202ENST00000244303 KPRPQ5T749 579 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-202ENST00000244303 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
HIF3A-202ENST00000244303 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
HIF3A-202ENST00000244303 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
HIF3A-202ENST00000244303 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
HIF3A-202ENST00000244303 UBL5Q9BZL1 73 aa9.61□□□□□ -0.87
HIF3A-202ENST00000244303 PKD1L1Q8TDX9 2849 aa9.61□□□□□ -0.87
HIF3A-202ENST00000244303 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
HIF3A-202ENST00000244303 FLNBO75369 2602 aaKnown RBP9.6□□□□□ -0.87
HIF3A-202ENST00000244303 GHRHP01286 108 aa9.6□□□□□ -0.87
HIF3A-202ENST00000244303 Q6ZTC4 211 aa9.6□□□□□ -0.87
HIF3A-202ENST00000244303 DPH3Q96FX2 82 aa9.6□□□□□ -0.87
HIF3A-202ENST00000244303 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
HIF3A-202ENST00000244303 FAM19A1Q7Z5A9 133 aa9.59□□□□□ -0.87
HIF3A-202ENST00000244303 H3BNG1 76 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 Q6ZQY7 126 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
HIF3A-202ENST00000244303 DSCR8Q96T75 97 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 LAMTOR3Q9UHA4 124 aa9.58□□□□□ -0.88
HIF3A-202ENST00000244303 CMYA5Q8N3K9 4069 aa9.57□□□□□ -0.88
HIF3A-202ENST00000244303 Q6ZQT0 140 aa9.57□□□□□ -0.88
HIF3A-202ENST00000244303 DIRC1Q969H9 104 aa9.57□□□□□ -0.88
HIF3A-202ENST00000244303 ESRGQ1W209 222 aa9.55□□□□□ -0.88
HIF3A-202ENST00000244303 C5orf47Q569G3 176 aa9.55□□□□□ -0.88
HIF3A-202ENST00000244303 Q6ZRU5 148 aa9.55□□□□□ -0.88
HIF3A-202ENST00000244303 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
HIF3A-202ENST00000244303 ZNF73O43830 326 aaPredicted RBP9.54□□□□□ -0.88
HIF3A-202ENST00000244303 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
HIF3A-202ENST00000244303 VPREB1P12018 145 aa9.54□□□□□ -0.88
HIF3A-202ENST00000244303 TENM3Q9P273 2699 aa9.53□□□□□ -0.88
HIF3A-202ENST00000244303 M0R2N4 97 aa9.53□□□□□ -0.88
HIF3A-202ENST00000244303 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
HIF3A-202ENST00000244303 COX7BP24311 80 aa9.52□□□□□ -0.89
HIF3A-202ENST00000244303 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
HIF3A-202ENST00000244303 C20orf197Q8N268 126 aa9.52□□□□□ -0.89
HIF3A-202ENST00000244303 STAB1Q9NY15 2570 aa9.52□□□□□ -0.89
HIF3A-202ENST00000244303 NDUFC2-KCTD14E9PQ53 114 aa9.51□□□□□ -0.89
HIF3A-202ENST00000244303 HAMPP81172 84 aa9.51□□□□□ -0.89
HIF3A-202ENST00000244303 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
HIF3A-202ENST00000244303 H3BQ85 93 aa9.49□□□□□ -0.89
HIF3A-202ENST00000244303 M0R378 163 aa9.49□□□□□ -0.89
HIF3A-202ENST00000244303 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.49□□□□□ -0.89
HIF3A-202ENST00000244303 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
HIF3A-202ENST00000244303 OXTP01178 125 aa9.49□□□□□ -0.89
HIF3A-202ENST00000244303 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
HIF3A-202ENST00000244303 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
HIF3A-202ENST00000244303 Q6ZRP5 223 aa9.48□□□□□ -0.89
HIF3A-202ENST00000244303 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
HIF3A-202ENST00000244303 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
HIF3A-202ENST00000244303 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
HIF3A-202ENST00000244303 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
HIF3A-202ENST00000244303 PDE6GP18545 87 aa9.45□□□□□ -0.9
HIF3A-202ENST00000244303 Q6ZVQ6 151 aa9.45□□□□□ -0.9
HIF3A-202ENST00000244303 TRAV7A0A075B6U4 112 aa9.44□□□□□ -0.9
HIF3A-202ENST00000244303 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
HIF3A-202ENST00000244303 PRB2P02812 416 aaPredicted RBP9.44□□□□□ -0.9
HIF3A-202ENST00000244303 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms