RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TRBV7-7A0A0K0K1E9 115 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 A0A1B0GX51 115 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 NDUFC2O95298 119 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 ATP5G1P05496 136 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 WFDC9Q8NEX5 89 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 IMUPQ9GZP8 106 aa5.34□□□□□ -1.56
CXCR4-201ENST00000241393 KRTAP29-1A8MX34 341 aaPredicted RBP5.33□□□□□ -1.56
CXCR4-201ENST00000241393 DNAL4O96015 105 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 SPART-AS1P0CW21 52 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 PFN2P35080 140 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 KIAA0087Q14695 138 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 DEFB135Q30KP9 77 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 Q8NAQ8 132 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 C22orf24Q9Y442 160 aa5.33□□□□□ -1.56
CXCR4-201ENST00000241393 MT3P25713 68 aa5.32□□□□□ -1.56
CXCR4-201ENST00000241393 LELP1Q5T871 98 aa5.32□□□□□ -1.56
CXCR4-201ENST00000241393 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
CXCR4-201ENST00000241393 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
CXCR4-201ENST00000241393 KRTAP1-5Q9BYS1 174 aa5.32□□□□□ -1.56
CXCR4-201ENST00000241393 NDUFV3P56181 108 aaKnown RBP5.31□□□□□ -1.56
CXCR4-201ENST00000241393 REG3AQ06141 175 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 LINC00643Q86TS7 51 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 ANGP03950 147 aaKnown RBP5.31□□□□□ -1.56
CXCR4-201ENST00000241393 SPATA3Q8NHX4 192 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 OBSCN-AS1Q96MR7 158 aa5.31□□□□□ -1.56
CXCR4-201ENST00000241393 KLK5Q9Y337 293 aaPredicted RBP5.31□□□□□ -1.56
CXCR4-201ENST00000241393 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
CXCR4-201ENST00000241393 NIPBLQ6KC79 2804 aaeCLIP5.3□□□□□ -1.56
CXCR4-201ENST00000241393 A0A096LPF7 62 aa5.3□□□□□ -1.56
CXCR4-201ENST00000241393 OR13C6PQ8NH95 151 aa5.3□□□□□ -1.56
CXCR4-201ENST00000241393 LINC00167Q96N53 147 aa5.3□□□□□ -1.56
CXCR4-201ENST00000241393 A0A087WYN8 130 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 CLPSL2Q6UWE3 100 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 TMEM126AQ9H061 195 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 Q9HAA7 133 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 PRR34Q9NV39 138 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
CXCR4-201ENST00000241393 CUBNO60494 3623 aa5.29□□□□□ -1.56
CXCR4-201ENST00000241393 H3BNG1 76 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
CXCR4-201ENST00000241393 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
CXCR4-201ENST00000241393 A0A0J9YWU9 116 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 LECT2O14960 151 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 DEFB4AO15263 64 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 ORMDL1Q9P0S3 153 aa5.28□□□□□ -1.56
CXCR4-201ENST00000241393 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
CXCR4-201ENST00000241393 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
CXCR4-201ENST00000241393 IGLV10-54A0A075B6I4 117 aa5.25□□□□□ -1.57
CXCR4-201ENST00000241393 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
CXCR4-201ENST00000241393 Q8N814 137 aa5.25□□□□□ -1.57
CXCR4-201ENST00000241393 SMCR5Q8TEV8 140 aa5.25□□□□□ -1.57
CXCR4-201ENST00000241393 HIVEP1P15822 2718 aa5.25□□□□□ -1.57
CXCR4-201ENST00000241393 H3BQ85 93 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 LYPD5Q6UWN5 251 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 Q6ZTC4 211 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 HTN3P15516 51 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 ENHOQ6UWT2 76 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 KLK12Q9UKR0 248 aa5.24□□□□□ -1.57
CXCR4-201ENST00000241393 CYSRT1A8MQ03 144 aa5.23□□□□□ -1.57
CXCR4-201ENST00000241393 S100A7L2Q5SY68 101 aa5.23□□□□□ -1.57
CXCR4-201ENST00000241393 Q6JHZ5 121 aa5.23□□□□□ -1.57
CXCR4-201ENST00000241393 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
CXCR4-201ENST00000241393 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
CXCR4-201ENST00000241393 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
CXCR4-201ENST00000241393 IGLV6-57P01721 117 aa5.22□□□□□ -1.57
CXCR4-201ENST00000241393 CCKP06307 115 aa5.22□□□□□ -1.57
CXCR4-201ENST00000241393 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
CXCR4-201ENST00000241393 LINC00575Q6W349 94 aa5.22□□□□□ -1.57
CXCR4-201ENST00000241393 C2orf48Q96LS8 159 aa5.22□□□□□ -1.57
CXCR4-201ENST00000241393 FAM236AA0A1B0GUQ0 79 aa5.21□□□□□ -1.57
CXCR4-201ENST00000241393 FAM236BA0A1B0GV22 79 aa5.21□□□□□ -1.57
CXCR4-201ENST00000241393 F8WDY8 70 aa5.21□□□□□ -1.57
CXCR4-201ENST00000241393 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.57
CXCR4-201ENST00000241393 KRTAP24-1Q3LI83 254 aa5.21□□□□□ -1.57
CXCR4-201ENST00000241393 C6orf99Q4VX62 202 aa5.21□□□□□ -1.57
CXCR4-201ENST00000241393 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.57
CXCR4-201ENST00000241393 VWFP04275 2813 aa5.21□□□□□ -1.58
CXCR4-201ENST00000241393 NCR3O14931 201 aa5.21□□□□□ -1.58
CXCR4-201ENST00000241393 EGFEM1PQ0D2K5 195 aa5.21□□□□□ -1.58
CXCR4-201ENST00000241393 KPRPQ5T749 579 aaPredicted RBP5.21□□□□□ -1.58
CXCR4-201ENST00000241393 C6orf223Q8N319 242 aa5.21□□□□□ -1.58
CXCR4-201ENST00000241393 NBEAL2Q6ZNJ1 2754 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
CXCR4-201ENST00000241393 ATP5EP2Q5VTU8 51 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 Q8NDZ9 215 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 C6orf48Q9UBA6 75 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 F8P00451 2351 aa5.2□□□□□ -1.58
CXCR4-201ENST00000241393 FLNBO75369 2602 aaKnown RBP5.19□□□□□ -1.58
CXCR4-201ENST00000241393 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
CXCR4-201ENST00000241393 hADV29S1A0JD25 119 aa5.19□□□□□ -1.58
CXCR4-201ENST00000241393 KRTAP26-1Q6PEX3 210 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms