RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 Q6ZRU5 148 aa9.38□□□□□ -0.91
NEK9-201ENST00000238616 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
NEK9-201ENST00000238616 ADAMTSL4-AS1Q5T5F5 129 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 LINC00313P59037 77 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 FHL3Q13643 280 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
NEK9-201ENST00000238616 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
NEK9-201ENST00000238616 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
NEK9-201ENST00000238616 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
NEK9-201ENST00000238616 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
NEK9-201ENST00000238616 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
NEK9-201ENST00000238616 CFAP54Q96N23 3096 aa9.35□□□□□ -0.91
NEK9-201ENST00000238616 Q6ZSN1 163 aa9.35□□□□□ -0.91
NEK9-201ENST00000238616 AKAP13Q12802 2813 aa9.34□□□□□ -0.91
NEK9-201ENST00000238616 KIAA0087Q14695 138 aa9.34□□□□□ -0.91
NEK9-201ENST00000238616 Q8N6K4 173 aa9.34□□□□□ -0.91
NEK9-201ENST00000238616 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
NEK9-201ENST00000238616 Q96NJ1 140 aa9.33□□□□□ -0.92
NEK9-201ENST00000238616 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
NEK9-201ENST00000238616 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
NEK9-201ENST00000238616 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
NEK9-201ENST00000238616 REV3LO60673 3130 aa9.3□□□□□ -0.92
NEK9-201ENST00000238616 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
NEK9-201ENST00000238616 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
NEK9-201ENST00000238616 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
NEK9-201ENST00000238616 Q8N2B8 174 aa9.27□□□□□ -0.93
NEK9-201ENST00000238616 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
NEK9-201ENST00000238616 F8WDY8 70 aa9.25□□□□□ -0.93
NEK9-201ENST00000238616 RTL8CO15255 209 aa9.25□□□□□ -0.93
NEK9-201ENST00000238616 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
NEK9-201ENST00000238616 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
NEK9-201ENST00000238616 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
NEK9-201ENST00000238616 LINC00846Q9NV44 126 aa9.24□□□□□ -0.93
NEK9-201ENST00000238616 CRIP3Q6Q6R5 217 aa9.23□□□□□ -0.93
NEK9-201ENST00000238616 EPG5Q9HCE0 2579 aa9.23□□□□□ -0.93
NEK9-201ENST00000238616 CXCL6P80162 114 aa9.23□□□□□ -0.93
NEK9-201ENST00000238616 VPREB1P12018 145 aa9.23□□□□□ -0.93
NEK9-201ENST00000238616 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
NEK9-201ENST00000238616 LINC00167Q96N53 147 aa9.21□□□□□ -0.93
NEK9-201ENST00000238616 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.94
NEK9-201ENST00000238616 AMELXQ99217 191 aa9.2□□□□□ -0.94
NEK9-201ENST00000238616 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
NEK9-201ENST00000238616 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
NEK9-201ENST00000238616 Q6ZRP5 223 aa9.18□□□□□ -0.94
NEK9-201ENST00000238616 LINC00315P59091 139 aa9.18□□□□□ -0.94
NEK9-201ENST00000238616 C8orf87E5RJ46 101 aa9.17□□□□□ -0.94
NEK9-201ENST00000238616 HECTD1Q9ULT8 2610 aa9.17□□□□□ -0.94
NEK9-201ENST00000238616 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
NEK9-201ENST00000238616 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
NEK9-201ENST00000238616 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
NEK9-201ENST00000238616 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
NEK9-201ENST00000238616 MKI67P46013 3256 aaKnown RBP9.15□□□□□ -0.94
NEK9-201ENST00000238616 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.95
NEK9-201ENST00000238616 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
NEK9-201ENST00000238616 CEP295Q9C0D2 2601 aa9.13□□□□□ -0.95
NEK9-201ENST00000238616 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
NEK9-201ENST00000238616 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
NEK9-201ENST00000238616 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
NEK9-201ENST00000238616 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
NEK9-201ENST00000238616 CRIPTQ9P021 101 aa9.11□□□□□ -0.95
NEK9-201ENST00000238616 FAM168BA1KXE4 195 aa9.1□□□□□ -0.95
NEK9-201ENST00000238616 Q8NBF4 154 aa9.1□□□□□ -0.95
NEK9-201ENST00000238616 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
NEK9-201ENST00000238616 LINC01600Q96MT4 127 aa9.09□□□□□ -0.96
NEK9-201ENST00000238616 BRCA2P51587 3418 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 COL4A2P08572 1712 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 LINC01561Q8N1V8 128 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 NBDYA0A0U1RRE5 68 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 A0A1W2PPR1 153 aa9.08□□□□□ -0.96
NEK9-201ENST00000238616 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
NEK9-201ENST00000238616 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
NEK9-201ENST00000238616 FREM2Q5SZK8 3169 aa9.07□□□□□ -0.96
NEK9-201ENST00000238616 DNAH14Q0VDD8 3507 aa9.06□□□□□ -0.96
NEK9-201ENST00000238616 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
NEK9-201ENST00000238616 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
NEK9-201ENST00000238616 Q6ZRX8 168 aa9.04□□□□□ -0.96
NEK9-201ENST00000238616 A0A0D9SG42 100 aa9.04□□□□□ -0.96
NEK9-201ENST00000238616 K7EQZ3 153 aa9.03□□□□□ -0.96
NEK9-201ENST00000238616 MGAM2Q2M2H8 2515 aa9.03□□□□□ -0.96
NEK9-201ENST00000238616 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
NEK9-201ENST00000238616 BCE1O60756 84 aa9.03□□□□□ -0.96
NEK9-201ENST00000238616 RANBP2P49792 3224 aaKnown RBP9.03□□□□□ -0.96
NEK9-201ENST00000238616 CENPEQ02224 2701 aa9.02□□□□□ -0.97
NEK9-201ENST00000238616 ATRQ13535 2644 aa9.02□□□□□ -0.97
NEK9-201ENST00000238616 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.97
NEK9-201ENST00000238616 ELOF1P60002 83 aaKnown RBP9.01□□□□□ -0.97
NEK9-201ENST00000238616 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
NEK9-201ENST00000238616 WWC2-AS2Q96NR7 200 aa9.01□□□□□ -0.97
NEK9-201ENST00000238616 DSCR10P59022 87 aa9.01□□□□□ -0.97
NEK9-201ENST00000238616 C11orf72Q8NBR9 251 aa9□□□□□ -0.97
NEK9-201ENST00000238616 MAST4O15021 2626 aa8.99□□□□□ -0.97
NEK9-201ENST00000238616 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
NEK9-201ENST00000238616 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
NEK9-201ENST00000238616 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
NEK9-201ENST00000238616 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms