RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 BOD1L2Q8IYS8 172 aa6.4□□□□□ -1.38
HMGCL-201ENST00000235958 LITAFQ99732 161 aa6.4□□□□□ -1.38
HMGCL-201ENST00000235958 DLEU1O43261 78 aa6.39□□□□□ -1.39
HMGCL-201ENST00000235958 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
HMGCL-201ENST00000235958 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
HMGCL-201ENST00000235958 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
HMGCL-201ENST00000235958 S100A12P80511 92 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 C22orf24Q9Y442 160 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 HERC2O95714 4834 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
HMGCL-201ENST00000235958 NPC2P61916 151 aa6.37□□□□□ -1.39
HMGCL-201ENST00000235958 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
HMGCL-201ENST00000235958 RPL24P83731 157 aaKnown RBP6.37□□□□□ -1.39
HMGCL-201ENST00000235958 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
HMGCL-201ENST00000235958 SOSTDC1Q6X4U4 206 aa6.37□□□□□ -1.39
HMGCL-201ENST00000235958 Q8NDZ9 215 aa6.37□□□□□ -1.39
HMGCL-201ENST00000235958 TP73-AS1Q9UF72 201 aa6.37□□□□□ -1.39
HMGCL-201ENST00000235958 TMEM238C9JI98 176 aa6.36□□□□□ -1.39
HMGCL-201ENST00000235958 VPREB1P12018 145 aa6.36□□□□□ -1.39
HMGCL-201ENST00000235958 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGCL-201ENST00000235958 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
HMGCL-201ENST00000235958 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
HMGCL-201ENST00000235958 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
HMGCL-201ENST00000235958 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
HMGCL-201ENST00000235958 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
HMGCL-201ENST00000235958 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
HMGCL-201ENST00000235958 M0QXV9 152 aa6.35□□□□□ -1.39
HMGCL-201ENST00000235958 SMIM6P0DI80 62 aa6.35□□□□□ -1.39
HMGCL-201ENST00000235958 Q6ZVH6 145 aa6.35□□□□□ -1.39
HMGCL-201ENST00000235958 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
HMGCL-201ENST00000235958 HSPG2P98160 4391 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 IFITM1P13164 125 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 LBHQ53QV2 105 aaPredicted RBP6.34□□□□□ -1.39
HMGCL-201ENST00000235958 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.39
HMGCL-201ENST00000235958 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 NKAPP1Q8N9T2 125 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
HMGCL-201ENST00000235958 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
HMGCL-201ENST00000235958 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 M0R378 163 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 C7orf33Q8WU49 177 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 HIGD1BQ9P298 99 aa6.33□□□□□ -1.4
HMGCL-201ENST00000235958 RPL37AP8A6NKH3 93 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 NDUFC2O95298 119 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 C12orf57Q99622 126 aa6.32□□□□□ -1.4
HMGCL-201ENST00000235958 NCR3O14931 201 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 UBE2BP63146 152 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 Q8N1X5 172 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
HMGCL-201ENST00000235958 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
HMGCL-201ENST00000235958 TRBV10-2A0A0K0K1G8 114 aa6.3□□□□□ -1.4
HMGCL-201ENST00000235958 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
HMGCL-201ENST00000235958 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
HMGCL-201ENST00000235958 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
HMGCL-201ENST00000235958 RPL37AP61513 92 aaKnown RBP6.29□□□□□ -1.4
HMGCL-201ENST00000235958 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
HMGCL-201ENST00000235958 A4D1N5 150 aa6.28□□□□□ -1.4
HMGCL-201ENST00000235958 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
HMGCL-201ENST00000235958 Q5VSD8 79 aa6.28□□□□□ -1.4
HMGCL-201ENST00000235958 SRRM2Q9UQ35 2752 aaKnown RBP6.28□□□□□ -1.4
HMGCL-201ENST00000235958 FAT1Q14517 4588 aa6.28□□□□□ -1.4
HMGCL-201ENST00000235958 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
HMGCL-201ENST00000235958 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
HMGCL-201ENST00000235958 TAL2Q16559 108 aa6.27□□□□□ -1.41
HMGCL-201ENST00000235958 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
HMGCL-201ENST00000235958 LINC00337Q8N6G1 96 aa6.27□□□□□ -1.41
HMGCL-201ENST00000235958 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
HMGCL-201ENST00000235958 IGLV6-57P01721 117 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 DDTP30046 118 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 CEND1Q8N111 149 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 RYR1P21817 5038 aa6.26□□□□□ -1.41
HMGCL-201ENST00000235958 A6NDN8 102 aa6.25□□□□□ -1.41
HMGCL-201ENST00000235958 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
HMGCL-201ENST00000235958 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
HMGCL-201ENST00000235958 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
HMGCL-201ENST00000235958 HNRNPA3P51991 378 aaKnown RBP6.24□□□□□ -1.41
HMGCL-201ENST00000235958 TRAV13-2A0A0B4J235 113 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 BCE1O60756 84 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 CFC1P0CG37 223 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 HSD52Q0P140 79 aa6.23□□□□□ -1.41
HMGCL-201ENST00000235958 PRYO14603 147 aa6.22□□□□□ -1.41
HMGCL-201ENST00000235958 FXYD2P54710 66 aa6.22□□□□□ -1.41
HMGCL-201ENST00000235958 CTAG1AP78358 180 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms