RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 F8W036 122 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TRGC2P03986 189 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 CKS1BP61024 79 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00173Q6ZV60 143 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 PHF5AQ7RTV0 110 aaKnown RBP1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 Q8IZM0 81 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 OSTCQ9NRP0 149 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 FAM74A3Q4VXF1 159 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 AMN1Q8IY45 258 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 PRELID3AQ96N28 172 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TRBV20OR9-2A0A075B6H5 130 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 IGHV3OR16-9A0A0B4J2B5 98 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 F8WEM9 126 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00242Q5T6M2 205 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 FAM19A5Q7Z5A7 132 aaPredicted RBP1.36□□□□□ -2.19
PRKD3-201ENST00000234179 DAND5Q8N907 189 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 NKAPP1Q8N9T2 125 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 CYSLTR1Q9Y271 337 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 UBE2D4Q9Y2X8 147 aa1.36□□□□□ -2.19
PRKD3-201ENST00000234179 TRAV9-1A0A075B6T8 112 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 TRAV13-1A0A0B4J241 112 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 LOC107984156A0A0G2JMH3 177 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 SMLR1H3BR10 107 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 HERVK_113P63121 156 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 ARL17AQ8IVW1 177 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 CEND1Q8N111 149 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 NXT2Q9NPJ8 142 aaKnown RBP1.35□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00846Q9NV44 126 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 TRBV24-1A0A075B6N3 115 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 SPINK1P00995 79 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 CKS2P33552 79 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 SNURFQ9Y675 71 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 F8VRH5 84 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 ORMDL2Q53FV1 153 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 C6orf226Q5I0X4 101 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 TEX43Q6ZNM6 134 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 FAM19A3Q7Z5A8 133 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 C5orf38Q86SI9 138 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 SSBP3-AS1Q7Z2R9 100 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 SMIM2Q9BVW6 85 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 KRTAP4-11Q9BYQ6 195 aa1.35□□□□□ -2.19
PRKD3-201ENST00000234179 A0A1B0GWB2 263 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 COA6Q5JTJ3 125 aaKnown RBP1.34□□□□□ -2.19
PRKD3-201ENST00000234179 PPDPFQ9H3Y8 114 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 C6orf48Q9UBA6 75 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 NAT8BQ9UHF3 227 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 LRP1Q07954 4544 aaKnown RBP1.34□□□□□ -2.19
PRKD3-201ENST00000234179 LRP2P98164 4655 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 MUC21A0A0G2JKD1 596 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 LINC00587B1AMM8 73 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 H3BRM9 83 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 GAGE2EQ4V326 116 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 ALKAL2Q6UX46 152 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 TMEM141Q96I45 108 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 SMIM7Q9BQ49 75 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 MAP1LC3CQ9BXW4 147 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 GAGE2DQ9UEU5 116 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 C22orf24Q9Y442 160 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 TNXBP22105 4242 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 ATP5L2Q7Z4Y8 100 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 TRAPPC1Q9Y5R8 145 aa1.34□□□□□ -2.19
PRKD3-201ENST00000234179 APOC3P02656 99 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 FAM104BQ5XKR9 115 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 NRACQ8N912 160 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 RPL39LQ96EH5 51 aaKnown RBP1.34□□□□□ -2.2
PRKD3-201ENST00000234179 PMCHL2Q9BQD1 86 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 SEC11CQ9BY50 192 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 MUC21A0A140T8X8 626 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 Q6ZUT4 128 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 RPS10P5Q9NQ39 176 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 V9GYY9 64 aa1.34□□□□□ -2.2
PRKD3-201ENST00000234179 MT3P25713 68 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 COX17Q14061 63 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 KIAA0087Q14695 138 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 C5orf47Q569G3 176 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 SLC25A34Q6PIV7 304 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 TMEM170BQ5T4T1 132 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 TMEM136Q6ZRR5 245 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 TIMM17AQ99595 171 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 LIMD2Q9BT23 127 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 JMJD7-PLA2G4BH0Y9G9 81 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 TRACP01848 142 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 LGALS3P17931 250 aaKnown RBP1.33□□□□□ -2.2
PRKD3-201ENST00000234179 COX19Q49B96 90 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 ORMDL3Q8N138 153 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 OPRPNQ99935 248 aaPredicted RBP1.33□□□□□ -2.2
PRKD3-201ENST00000234179 MPLKIPQ8TAP9 179 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 HIGD1CA8MV81 97 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 MRPL54Q6P161 138 aaKnown RBP1.33□□□□□ -2.2
PRKD3-201ENST00000234179 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 SIGMAR1Q99720 223 aa1.33□□□□□ -2.2
PRKD3-201ENST00000234179 PRYO14603 147 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 TAX1BP3O14907 124 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 CFC1P0CG37 223 aa1.32□□□□□ -2.2
PRKD3-201ENST00000234179 C2orf66Q6UXQ4 117 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms